FFCP PHASE1:Hg19::chr6:29910301..29910324,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3105 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4931 | |||
|TSSclassifier=strong | |||
|UniProt=B4DVX9,P04439,P13746,P16188 | |||
|association_with_transcript=0bp_to_ENST00000355767,ENST00000376809,ENST00000496081_5end | |||
|coexpression_cluster_id=C4586 | |||
|description=CAGE_peak_1_at_HLA-A_5end | |||
|id=chr6:29910301..29910324,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.95e-43!140;CL:0002087!1.36e-36!119;CL:0002031!3.30e-34!124;CL:0000037!8.82e-26!172;CL:0000566!8.82e-26!172;CL:0000988!2.34e-25!182;CL:0000766!6.64e-25!76;CL:0002032!1.62e-24!165;CL:0000837!1.62e-24!165;CL:0002057!3.97e-21!42;CL:0002009!1.14e-20!65;CL:0000557!1.46e-20!71;CL:0002194!2.18e-20!63;CL:0000576!2.18e-20!63;CL:0000040!2.18e-20!63;CL:0000559!2.18e-20!63;CL:0000860!3.59e-19!45;CL:0000839!5.60e-19!70;CL:0000542!1.26e-14!53;CL:0000051!1.26e-14!53;CL:0000838!1.91e-14!52;CL:0000134!3.95e-11!358;CL:0000763!5.23e-11!112;CL:0000049!5.23e-11!112;CL:0000791!2.62e-10!18;CL:0000789!2.62e-10!18;CL:0002420!2.62e-10!18;CL:0002419!2.62e-10!18;CL:0000790!2.62e-10!18;CL:0002320!3.47e-10!365;CL:0000084!8.62e-09!25;CL:0000827!8.62e-09!25;CL:0000048!1.38e-08!430;CL:0000219!2.69e-08!390;CL:0000723!5.93e-08!436;CL:0000034!7.86e-08!444;CL:0000625!9.03e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.99e-15;33!CL:0002057;1.99e-15;33!CL:0000473;7.55e-15;39!CL:0000234;7.55e-15;39!CL:0000576;6.96e-13;48!CL:0000766;1.57e-11;69!CL:0002087;2.36e-11;104!CL:0000791;2.64e-10;18!CL:0000789;2.64e-10;18!CL:0002419;2.64e-10;18!CL:0000738;3.33e-09;136!CL:0000084;8.66e-09;25!CL:0000542;1.17e-08;53!CL:0000625;9.08e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.06e-44,136;CL:0002087,5.29e-38,115;CL:0002031,1.75e-35,120;CL:0000988,1.56e-26,177;CL:0000037,1.68e-26,168;CL:0000766,1.88e-26,72;CL:0002032,3.08e-25,161;CL:0000837,3.08e-25,161;CL:0000473,2.34e-23,48;CL:0000234,2.34e-23,48;CL:0002009,3.48e-22,61;CL:0000557,6.02e-22,67;CL:0002194,6.26e-22,59;CL:0000576,6.26e-22,59;CL:0000040,6.26e-22,59;CL:0000559,6.26e-22,59;CL:0000860,3.97e-21,42;CL:0002057,3.97e-21,42;CL:0000839,2.80e-20,66;CL:0000542,1.26e-14,53;CL:0000051,1.26e-14,53;CL:0000838,1.91e-14,52;CL:0000134,1.28e-11,354;CL:0000763,1.61e-11,108;CL:0000049,1.61e-11,108;CL:0002320,1.20e-10,361;CL:0000791,2.62e-10,18;CL:0000789,2.62e-10,18;CL:0002420,2.62e-10,18;CL:0002419,2.62e-10,18;CL:0000790,2.62e-10,18;CL:0000048,8.15e-09,427;CL:0000084,8.62e-09,25;CL:0000827,8.62e-09,25;CL:0000219,1.08e-08,386;CL:0000723,3.60e-08,433;CL:0000034,4.82e-08,441;CL:0000625,9.03e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.82e-15;42!CL:0000790;2.64e-10;18!CL:0000051;1.17e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.34e-26!112;UBERON:0002390!2.19e-26!102;UBERON:0003061!2.19e-26!102;UBERON:0002371!6.27e-19!80;UBERON:0002405!1.41e-17!115;UBERON:0001474!1.48e-17!86;UBERON:0004765!5.82e-13!101;UBERON:0001434!5.82e-13!101;UBERON:0003081!1.24e-10!216;UBERON:0002384!6.33e-10!375;UBERON:0000178!8.12e-07!15;UBERON:0000179!8.12e-07!15;UBERON:0000463!8.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.12e-07;15!UBERON:0000179;8.12e-07;15!UBERON:0000463;8.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.01e-27,108;UBERON:0002390,1.31e-27,98;UBERON:0003061,1.31e-27,98;UBERON:0002405,5.70e-22,93;UBERON:0002371,4.53e-20,76;UBERON:0001474,1.50e-18,82;UBERON:0004765,5.67e-15,90;UBERON:0001434,8.38e-13,100;UBERON:0003081,1.45e-12,203;UBERON:0002384,2.26e-10,371;UBERON:0000926,6.25e-07,315;UBERON:0004120,6.25e-07,315;UBERON:0006603,6.25e-07,315;UBERON:0000178,8.12e-07,15;UBERON:0000179,8.12e-07,15;UBERON:0000463,8.12e-07,15 | |||
|phase1_expression=287.415196006021,292.889516682865,306.012011292353,87.0637695672235,42.0143428761651,179.701735964676,491.401763646523,250.161069877025,464.126861311113,164.396003519509,182.823906008776,52.8628120555017,74.3822878604239,193.694342382473,68.2678593999507,207.748470253599,219.983502728752,213.9808564835,277.633762511798,56.1432024830153,67.728229493092,344.486738904419,227.271373782059,152.204360681047,161.322291879322,568.439325359009,488.005903690478,456.52253161934,2181.20491512717,1431.6836549026,1620.46036274937,91.9421224478927,69.2773613189975,46.2192512708485,254.634688307451,223.916541167689,1150.9137221926,1669.74216131508,1407.22038789798,1549.02359516975,1894.548827544,961.64029441035,1110.66584763861,1619.30018528801,760.286398701885,613.980258866363,2095.11533866784,974.467894611727,830.322780369773,2656.55155070274,1400.94290400765,1285.04443721457,2889.3135502536,888.186924611345,1040.07541704454,2153.86884904648,884.488832337478,875.97214236694,2908.40914530832,1482.37117606448,1044.03752642983,1663.7699581418,1249.63981499952,794.909159743475,3443.04240708952,1374.20701420194,1293.60181116381,2282.34287519226,1016.89169091939,1109.18342990903,3022.15431714578,1726.4855575097,1746.87237867368,1122.39933617535,1358.96668537656,1322.10741857582,2053.03039146449,1800.02023759829,734.515931205656,1219.28451772506,1041.52772181444,897.611651599411,1258.37314789846,1120.67643030989,1103.88098404467,1704.36050893063,1652.03384251059,1005.24201748039,1138.31927093553,1036.10237742541,594.258339750264,788.0723081358,599.404421700359,693.899475039886,510.623300876179,565.48563001209,1322.4797844753,1362.56831445135,1396.44538120467,1489.13011444477,1773.34305275337,1936.87497326079,915.685623517183,2256.39598329542,2218.97169510047,2620.08137124049,1410.61732635197,1797.5054897104,2009.41691980012,1416.46811025607,1418.78099131255,1206.45024591502,1629.0761828984,1264.13041272389,757.882547586082,1212.29665752126,2199.30241278143,2943.16907055873,1119.6121371863,1725.98741480796,1455.82260282295,1912.30951343013,581.822260116514,521.673427065409,1355.49838309295,1709.5317597578,1853.2858890508,1653.78011467248,1745.04727748739,1466.63673812111,216.988111019426,91.8860177793981,316.076252877207,86.7453965722959,432.153278968137,244.790617043792,459.675277395535,1161.59743541239,159.952910641603,146.784861120217,94.071055477338,693.861652449133,488.519981600299,242.122241138232,789.29926136819,835.300349824585,1124.95730395012,558.0680608745,1463.16298177557,273.39272097856,296.155986976391,169.466215235907,229.112731061012,135.673906061762,292.391107038304,254.484188794562,127.277934620918,331.03186849591,353.275898847903,177.067204152511,335.556821151919,310.951291238872,824.441630397717,77.9445730333242,332.158198631521,129.931104653336,96.547630229253,64.8642127583936,90.4568161048711,128.150864041697,188.148191016528,3838.76355991252,5700.36988298038,237.235164365539,662.960583561555,138.660410272715,334.200772372564,254.710919224947,214.929039612204,193.994449649238,286.087308555609,502.215128577338,97.7202651155266,63.7181478889625,31.8750711071245,61.6024730514871,128.48723115904,93.0256084380173,177.931243793283,99.8325687702786,259.293460757375,36.2872600809233,28.8133840975274,28.0901613404497,94.1150729485058,90.8973948107083,126.057453034434,1549.1557258958,780.374428803126,43.6877453730253,408.175104551623,91.7431821049661,28.02654845132,44.8843867084376,143.106704407153,370.237257325216,718.438397691346,167.539334527351,125.034576075137,519.585126995575,404.789931214763,193.858848070524,121.808089559835,175.453207771073,497.676473830671,298.396555402559,85.2573795160488,93.1480626960782,578.533612966851,134.327873216433,170.404604407975,106.394215728388,131.070337856007,271.531498694432,162.556687872137,328.10445712502,129.292128497371,105.493695583902,128.859082642296,133.100794639736,171.325857744552,43.7972830890996,378.607868238155,859.369893425695,350.862700235301,326.915021334513,260.59849288272,272.223946891681,211.236616667861,212.089706297464,295.036377059154,215.047011319205,225.169817536431,317.662562025347,243.510838220554,236.61950152203,101.865452738201,231.398926775686,112.359705093472,194.051499028915,43.0967118394225,138.578637551545,192.006719671456,52.0926457309288,237.613663265295,314.826931897794,221.805326810832,169.726647419006,284.79857884215,185.454655652535,178.868759615368,46.797065337581,85.1554917949112,284.956935428739,196.659562845001,504.12763558167,819.484357260601,438.345566748514,44.2514462857194,27.4715571870359,1528.51517379056,753.727738013485,809.148047499837,72.1750521698183,159.751003917115,98.2501423889738,263.928966405294,72.9491185670044,130.733493595337,193.616652493106,377.815830350753,383.349685634888,280.169189442573,613.033256718501,605.38892418154,691.399050260483,770.118628170009,369.516483409043,286.271739686053,188.014754210292,576.511914615876,9.9796665067371,27.0295242676634,34.1023029067418,448.443581963731,1473.54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| |||
|short_description=p1@HLA-A | |||
}} |
Revision as of 10:45, 22 January 2014
Short description: | p1@HLA-A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-A_5end |
Coexpression cluster: | C4586_Eosinophils_CD14_myeloma_renal_CD4_smallcell_Neutrophils |
Association with transcript: | 0bp_to_ENST00000355767, ENST00000376809, ENST00000496081_5end |
EntrezGene: | HLA-A |
HGNC: | 4931 |
UniProt: | B4DVX9P04439P13746P16188 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.01e-27 | 108 |
hematopoietic system | 1.31e-27 | 98 |
blood island | 1.31e-27 | 98 |
immune system | 5.70e-22 | 93 |
bone marrow | 4.53e-20 | 76 |
bone element | 1.50e-18 | 82 |
skeletal element | 5.67e-15 | 90 |
skeletal system | 8.38e-13 | 100 |
lateral plate mesoderm | 1.45e-12 | 203 |
connective tissue | 2.26e-10 | 371 |
mesoderm | 6.25e-07 | 315 |
mesoderm-derived structure | 6.25e-07 | 315 |
presumptive mesoderm | 6.25e-07 | 315 |
blood | 8.12e-07 | 15 |
haemolymphatic fluid | 8.12e-07 | 15 |
organism substance | 8.12e-07 | 15 |