FFCP PHASE1:Hg19::chr6:28891709..28891769,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9975 | |||
|TSSclassifier=strong | |||
|UniProt=P14373,Q59EC6 | |||
|association_with_transcript=0bp_to_ENST00000377194,ENST00000377199,NM_006510,uc003nlr.2,uc003nls.2,uc003nlt.1_5end | |||
|description=CAGE_peak_1_at_TRIM27_5end | |||
|id=chr6:28891709..28891769,- | |||
|ontology_enrichment_celltype=CL:0000003!2.27e-13!722;CL:0000548!4.29e-13!679;CL:0000004!4.29e-13!679;CL:0000255!4.29e-13!679;CL:0000012!1.11e-12!682;CL:0000066!3.61e-10!254;CL:0000144!1.43e-08!625;CL:0002321!3.75e-08!248;CL:0000220!8.04e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.15e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.81e-10,253;CL:0002321,2.52e-08,250;CL:1000449,4.65e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.16e-09!51;DOID:0060083!5.16e-09!51;DOID:1240!1.34e-08!39;DOID:8692!2.90e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.60e-07;39!DOID:8692;5.37e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.16e-09,51;DOID:0060083,5.16e-09,51;DOID:1240,1.34e-08,39;DOID:8692,2.90e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.15e-07;15!UBERON:0004819;4.15e-07;15!UBERON:0001285;4.15e-07;15!UBERON:0007684;4.15e-07;15!UBERON:0000353;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.65e-07,15;UBERON:0009773,4.65e-07,15;UBERON:0001231,4.65e-07,15;UBERON:0001285,4.65e-07,15;UBERON:0007684,4.65e-07,15;UBERON:0004208,4.65e-07,15 | |||
|phase1_expression=37.7891028882758,36.3970890614671,36.6481450649525,46.03371724244,34.4160042709012,35.7658794881151,68.3909671054438,37.271472532183,44.1403711657727,58.7304108238606,129.093216074899,42.8145089375138,51.6983277327769,20.5452145913677,29.8257638155124,19.4974292471015,35.5589771534146,30.6730237962697,29.7639007262209,65.5004028968512,68.7482329493133,84.3193200776056,37.4969143141684,45.5791835492704,49.9659705587315,44.2433619280638,48.6856495438178,44.4715914422288,10.2274711980715,7.29275856384704,13.1593704818665,50.568167346341,51.5062121110808,60.2699036571864,58.1004004352262,41.2290774213522,52.5544786409377,10.5259127621057,9.42558903109666,12.3696196308036,31.3481663935894,30.4460046057841,27.560585736858,39.8391174256007,28.3406957766607,44.6354672585582,28.5887715393992,20.1472265130695,31.8997562021957,21.2892370318391,26.6407134790265,27.4319386670759,12.7555901872549,19.3645405075148,28.4395621848118,24.283261800996,27.5635211558424,19.5509431467224,15.610278510916,13.799948164272,12.7867425159808,45.5194794257668,35.7039947142721,49.0158463112598,20.0244374653723,23.2627942123367,31.7639346987743,31.4060831570929,21.3807996552283,26.2798502093191,23.6105806027014,16.5724936194404,16.7725065343669,24.0831026395614,28.7015804952809,33.3357246358318,36.3944764914644,36.3428080676445,22.8230333109854,40.4718096112573,35.8050018958362,36.7154949066914,42.2390986707174,30.5837622306794,38.2488979161329,41.3928315889512,30.4300950147369,35.0598988372235,42.967916731016,35.2999889178085,25.0453706408157,12.9192181661607,21.0250275468876,10.5737062863221,8.96813700770458,54.5205055484409,11.6058764367162,9.43225830597995,15.4201124249632,39.4560129122,27.3774703972216,36.4554810415745,44.8101475338196,31.5291592985041,22.9792607830373,25.9194656662837,22.4767206924963,37.7869393190742,38.6276262252838,49.8246850949139,60.2443038773149,31.5885363451207,33.2161901483015,33.4426035112141,33.4513676175926,30.2535945002502,25.6757730713287,24.0539211837841,18.2174178254042,44.5991580053735,48.180175585375,47.5226022224187,28.9104228629324,33.0205456778399,39.9778324967507,33.8591470422944,35.308503867605,8.0642697289893,9.09296665663925,13.4686695611003,14.6284119788377,44.9369576001436,26.4675503016108,30.3608888003036,41.6110465827788,37.804941448775,42.9454411407594,45.2570429381451,32.5199771044393,47.2283616595261,45.9375929175049,25.4754301843051,60.1087225682695,38.9323664923651,42.1911611751088,39.5274503669337,49.7262772340556,18.6022686958167,16.5878524126237,12.6295550452052,36.7710453628404,36.9900875895634,45.1282652089873,45.2246353539208,34.8184532054222,54.7484903460734,45.3519077384879,43.1555987812779,30.5958985910571,35.1456643402904,35.0461505884958,40.2944216030812,57.598645581368,31.9866879900906,62.3809299868955,34.1124962045185,22.9019960078693,27.3645897574473,52.1276567384003,57.9052052336559,61.7389877045472,17.1314542666882,3.87780264148325,46.6620635792512,18.3879622127268,33.6837161027782,39.5903450631524,52.2042649762841,30.5014808690587,38.6867544098192,72.5893170961994,50.3201798771006,38.590168389571,38.5272522119308,45.4424090655415,47.6775897081534,41.4846665625599,48.9731792532635,38.7078495269597,47.9196330097337,39.7533490267791,37.8139085632923,42.7344573131867,42.2756928173768,24.906808893097,43.7290169629894,30.377779665675,41.5801000048719,38.5736409674549,54.6096817162816,86.2341770179486,34.0038950187214,37.7857930013332,26.3210909709974,33.3622991869437,35.2460965168873,34.1040393717975,38.1132135417671,46.820694914793,33.7420674333337,29.8823980634982,50.715395238264,26.6906050727557,45.6023755880764,27.1730610244121,31.3923977968755,23.5797552490101,49.2245859776023,36.6358596596351,27.479829659198,36.9209976217279,25.1880245569101,35.2686032005814,42.1308659895987,35.1842495562177,28.9672641342894,51.838825105078,46.7830082174843,47.7557105193721,44.0559483815324,55.7629080435139,48.9069661161612,31.2899064659632,61.1078891283241,52.4912701139426,35.7563304584624,23.1001434134267,72.758682024504,74.1772636343647,64.5909560087732,74.0072557034363,74.2968904355105,68.3339383039958,58.247125125191,53.1760170489688,56.9425792280658,65.6958354615937,93.9619884483087,58.4435096090588,89.6753139451806,39.2940607947676,58.9696330006576,31.3118650541144,67.5438542104415,28.0413639878299,27.2792818374656,41.3758575990518,75.3091746826051,37.6983646543616,25.9247646443883,50.17447901779,94.6340654604416,33.1962086658129,27.7073667890434,30.4088518070778,38.1127422089235,36.1128699809756,41.8559134916116,66.3771694285791,56.6600866982616,27.0838706696137,37.2066781571388,33.7392738395413,43.1175636339174,17.8061055890791,20.4156140029037,33.1366534000539,32.5510011135637,37.9548852373559,14.7798971368783,29.3201285264043,28.6112799446265,21.0415131988764,26.1321837192606,29.3995250572743,49.6584953225761,51.5756767724207,65.007529488628,39.1772747199663,34.8397947098944,31.7267340219942,58.4202949439329,45.7758072274944,44.2963246358538,35.161906686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| |||
|short_description=p1@TRIM27 | |||
}} |
Revision as of 10:43, 22 January 2014
Short description: | p1@TRIM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377194, ENST00000377199, NM_006510, uc003nlr.2, uc003nls.2, uc003nlt.1_5end |
EntrezGene: | TRIM27 |
HGNC: | 9975 |
UniProt: | P14373Q59EC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.81e-10 | 253 |
embryonic cell | 2.52e-08 | 250 |
epithelial cell of nephron | 4.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.65e-07 | 15 |
renal tubule | 4.65e-07 | 15 |
nephron tubule | 4.65e-07 | 15 |
nephron | 4.65e-07 | 15 |
uriniferous tubule | 4.65e-07 | 15 |
nephrogenic mesenchyme | 4.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.16e-09 | 51 |
immune system cancer | 5.16e-09 | 51 |
leukemia | 1.34e-08 | 39 |
myeloid leukemia | 2.90e-07 | 31 |