FFCP PHASE1:Mm9::chr1:174128738..174128756,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174128738..174128756,+|id=chr1:174128738..174128756,+|ontology_enrichment_celltype=CL:0000055!1.27e-15!50;CL:0002319!4.71e-13!43;CL:0000221!7.40e-13!44;CL:0000133!7.40e-13!44;CL:0000117!3.99e-10!23;CL:0000337!3.99e-10!23;CL:0000393!6.16e-09!39;CL:0000211!6.16e-09!39;CL:0000333!2.32e-08!10;CL:0000095!2.32e-08!10;CL:0000243!2.32e-08!10;CL:0000123!2.32e-08!10;CL:0000125!2.32e-08!10;CL:0000030!2.32e-08!10;CL:0000339!2.32e-08!10;CL:0002453!2.23e-07!8;CL:0000540!4.13e-07!33;CL:0000047!4.13e-07!33;CL:0000031!4.13e-07!33;CL:0000404!4.13e-07!33;CL:0002321!6.80e-07!70;CL:0000220!6.80e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-23,43;CL:0000221,7.82e-23,44;CL:0000133,7.82e-23,44;CL:0002453,3.36e-22,8;CL:0000333,8.85e-22,10;CL:0000095,8.85e-22,10;CL:0000243,8.85e-22,10;CL:0000123,8.85e-22,10;CL:0000125,8.85e-22,10;CL:0000030,8.85e-22,10;CL:0000339,8.85e-22,10;CL:0000128,9.87e-17,6;CL:0000126,9.87e-17,6;CL:0000127,9.87e-17,6;CL:0002321,2.05e-15,70;CL:0000117,4.05e-14,23;CL:0000337,4.05e-14,23;CL:0000393,4.19e-10,39;CL:0000211,4.19e-10,39;CL:0002614,2.93e-09,3;CL:0000540,4.42e-09,33;CL:0000047,4.42e-09,33;CL:0000031,4.42e-09,33;CL:0000404,4.42e-09,33;CL:0000723,3.83e-08,91;CL:0000048,3.83e-08,91;CL:0000120,4.07e-08,3;CL:0000034,2.34e-07,97;CL:0000878,4.56e-07,2;CL:0000129,4.56e-07,2;CL:0000219,5.73e-07,54;CL:0002605,7.15e-07,2;CL:0002604,7.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.86e-19!75;UBERON:0001016!3.86e-19!75;UBERON:0001017!4.90e-18!73;UBERON:0005743!4.90e-18!73;UBERON:0004121!2.91e-16!102;UBERON:0000924!2.91e-16!102;UBERON:0006601!2.91e-16!102;UBERON:0001049!2.81e-15!52;UBERON:0005068!2.81e-15!52;UBERON:0006241!2.81e-15!52;UBERON:0007135!2.81e-15!52;UBERON:0000033!1.30e-13!63;UBERON:0002346!1.59e-13!71;UBERON:0003075!1.59e-13!71;UBERON:0007284!1.59e-13!71;UBERON:0000955!5.05e-13!50;UBERON:0006238!5.05e-13!50;UBERON:0000025!1.36e-12!114;UBERON:0002616!1.66e-12!49;UBERON:0003056!3.35e-12!49;UBERON:0004111!2.96e-11!122;UBERON:0002020!3.57e-11!34;UBERON:0003080!6.38e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0002791!1.11e-08!29;UBERON:0003528!1.11e-08!29;UBERON:0001893!1.11e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.48e-17,75;UBERON:0001017,5.36e-16,73;UBERON:0004121,3.08e-12,95;UBERON:0000924,3.08e-12,95;UBERON:0006601,3.08e-12,95;UBERON:0002020,1.50e-10,34;UBERON:0000073,1.88e-10,54;UBERON:0001049,1.22e-09,52;UBERON:0005068,1.22e-09,52;UBERON:0006241,1.22e-09,52;UBERON:0007135,1.22e-09,52;UBERON:0002038,2.93e-09,3;UBERON:0009663,2.93e-09,3;UBERON:0009661,2.93e-09,3;UBERON:0000125,2.93e-09,3;UBERON:0002308,2.93e-09,3;UBERON:0003528,2.47e-07,29;UBERON:0002791,2.47e-07,29;UBERON:0001893,2.47e-07,29;UBERON:0002346,3.51e-07,64;UBERON:0003075,3.51e-07,64;UBERON:0007284,3.51e-07,64;UBERON:0002616,4.37e-07,46;UBERON:0002950,5.04e-07,4;UBERON:0001891,5.04e-07,4;UBERON:0009616,5.04e-07,4;UBERON:0010286,5.04e-07,4;UBERON:0000955,7.05e-07,47;UBERON:0006238,7.05e-07,47|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.645616617207881,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.506884656097573,0.550640256485045,1.56478268869608,11.3373081317832,8.78744730937887,5.63846707315422,1.67983705950435,5.75010257459886,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,1.01158230429799,1.5869729378161,1.90149421051854,1.0165335962074,2.66788438833342,2.6996991518442,1.97773272513395,0.7104801149461,12.8828047522914,16.1371688235053,0.622137673850866,1.21505344498522,0.420649922702764,2.57085885963423,2.65042249141936,0.734944795289724,0.766763768145891,1.83843757322004,0,1.14918604276669,0.46081959976873,0.395658863190582,0.823388792421687,0,4.18774498502071,5.06486349028512,2.90316670775939,1.47314292736834,0.854230084794618,0.372798891650601,0.681535739998656,1.43585964202892,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,0.879580464790051,0.695297280769106,1.02286182932132,0.83115217823824,0.973447578406546,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.540186389416048,0.452114453507145,0.204109497453984,0,0.843315521037559,0.517406741478031,0.431135985865684,0,0,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.32427523818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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:174128738..174128756,+ | |||
|description=CAGE_peak_at_chr1:174128738..174128756,+ | |||
|id=chr1:174128738..174128756,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.27e-15!50;CL:0002319!4.71e-13!43;CL:0000221!7.40e-13!44;CL:0000133!7.40e-13!44;CL:0000117!3.99e-10!23;CL:0000337!3.99e-10!23;CL:0000393!6.16e-09!39;CL:0000211!6.16e-09!39;CL:0000333!2.32e-08!10;CL:0000095!2.32e-08!10;CL:0000243!2.32e-08!10;CL:0000123!2.32e-08!10;CL:0000125!2.32e-08!10;CL:0000030!2.32e-08!10;CL:0000339!2.32e-08!10;CL:0002453!2.23e-07!8;CL:0000540!4.13e-07!33;CL:0000047!4.13e-07!33;CL:0000031!4.13e-07!33;CL:0000404!4.13e-07!33;CL:0002321!6.80e-07!70;CL:0000220!6.80e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-23,43;CL:0000221,7.82e-23,44;CL:0000133,7.82e-23,44;CL:0002453,3.36e-22,8;CL:0000333,8.85e-22,10;CL:0000095,8.85e-22,10;CL:0000243,8.85e-22,10;CL:0000123,8.85e-22,10;CL:0000125,8.85e-22,10;CL:0000030,8.85e-22,10;CL:0000339,8.85e-22,10;CL:0000128,9.87e-17,6;CL:0000126,9.87e-17,6;CL:0000127,9.87e-17,6;CL:0002321,2.05e-15,70;CL:0000117,4.05e-14,23;CL:0000337,4.05e-14,23;CL:0000393,4.19e-10,39;CL:0000211,4.19e-10,39;CL:0002614,2.93e-09,3;CL:0000540,4.42e-09,33;CL:0000047,4.42e-09,33;CL:0000031,4.42e-09,33;CL:0000404,4.42e-09,33;CL:0000723,3.83e-08,91;CL:0000048,3.83e-08,91;CL:0000120,4.07e-08,3;CL:0000034,2.34e-07,97;CL:0000878,4.56e-07,2;CL:0000129,4.56e-07,2;CL:0000219,5.73e-07,54;CL:0002605,7.15e-07,2;CL:0002604,7.15e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.86e-19!75;UBERON:0001016!3.86e-19!75;UBERON:0001017!4.90e-18!73;UBERON:0005743!4.90e-18!73;UBERON:0004121!2.91e-16!102;UBERON:0000924!2.91e-16!102;UBERON:0006601!2.91e-16!102;UBERON:0001049!2.81e-15!52;UBERON:0005068!2.81e-15!52;UBERON:0006241!2.81e-15!52;UBERON:0007135!2.81e-15!52;UBERON:0000033!1.30e-13!63;UBERON:0002346!1.59e-13!71;UBERON:0003075!1.59e-13!71;UBERON:0007284!1.59e-13!71;UBERON:0000955!5.05e-13!50;UBERON:0006238!5.05e-13!50;UBERON:0000025!1.36e-12!114;UBERON:0002616!1.66e-12!49;UBERON:0003056!3.35e-12!49;UBERON:0004111!2.96e-11!122;UBERON:0002020!3.57e-11!34;UBERON:0003080!6.38e-11!40;UBERON:0002780!1.23e-10!39;UBERON:0001890!1.23e-10!39;UBERON:0006240!1.23e-10!39;UBERON:0002791!1.11e-08!29;UBERON:0003528!1.11e-08!29;UBERON:0001893!1.11e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.48e-17,75;UBERON:0001017,5.36e-16,73;UBERON:0004121,3.08e-12,95;UBERON:0000924,3.08e-12,95;UBERON:0006601,3.08e-12,95;UBERON:0002020,1.50e-10,34;UBERON:0000073,1.88e-10,54;UBERON:0001049,1.22e-09,52;UBERON:0005068,1.22e-09,52;UBERON:0006241,1.22e-09,52;UBERON:0007135,1.22e-09,52;UBERON:0002038,2.93e-09,3;UBERON:0009663,2.93e-09,3;UBERON:0009661,2.93e-09,3;UBERON:0000125,2.93e-09,3;UBERON:0002308,2.93e-09,3;UBERON:0003528,2.47e-07,29;UBERON:0002791,2.47e-07,29;UBERON:0001893,2.47e-07,29;UBERON:0002346,3.51e-07,64;UBERON:0003075,3.51e-07,64;UBERON:0007284,3.51e-07,64;UBERON:0002616,4.37e-07,46;UBERON:0002950,5.04e-07,4;UBERON:0001891,5.04e-07,4;UBERON:0009616,5.04e-07,4;UBERON:0010286,5.04e-07,4;UBERON:0000955,7.05e-07,47;UBERON:0006238,7.05e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.645616617207881,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.506884656097573,0.550640256485045,1.56478268869608,11.3373081317832,8.78744730937887,5.63846707315422,1.67983705950435,5.75010257459886,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,1.01158230429799,1.5869729378161,1.90149421051854,1.0165335962074,2.66788438833342,2.6996991518442,1.97773272513395,0.7104801149461,12.8828047522914,16.1371688235053,0.622137673850866,1.21505344498522,0.420649922702764,2.57085885963423,2.65042249141936,0.734944795289724,0.766763768145891,1.83843757322004,0,1.14918604276669,0.46081959976873,0.395658863190582,0.823388792421687,0,4.18774498502071,5.06486349028512,2.90316670775939,1.47314292736834,0.854230084794618,0.372798891650601,0.681535739998656,1.43585964202892,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.301445281105245,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0.41889341362691,0,0,0,0.127070227073065,0.449371918214468,0.457500602818626,0.879580464790051,0.695297280769106,1.02286182932132,0.83115217823824,0.973447578406546,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,0.780722657776222,0.229902104433473,0.540186389416048,0.452114453507145,0.204109497453984,0,0.843315521037559,0.517406741478031,0.431135985865684,0,0,0.43839146485515,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.324275238183423,0.584799949701329,0.878200461164203,0,0.420579897128254,0.411618449517138,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.754005626400808,0,0,0,0.432276099749388,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0.157635144106191,1.55025282754142,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0,0.963303539926752,0.234423373184406,0,0,0,0,0,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0,0,0,0,1.26042765821917,0.517434735131018,0.214337035031592,0.354680467284547,0.535106452806212,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0,0,0,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0.149516546043979,0,0.388902376688095,0,0,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.405450430580328,0,0,0,0.198681354781265,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0.443971906748129,0.269141569828427,0.671538465456314,0.19318959403219,0.187682475451182,0.183151624267265,0,0,1.12950368523413,0,0,1.20297227640581,0,0,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0.518936737920883,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0,0,0.256100609619477,0.0574354689556133,0,0,0.192909220463705,1.23625770240992,0.147198920134397,0,0,0.715308569841963,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr1:174128738..174128756,+ | |||
}} |
Latest revision as of 07:16, 5 August 2015
Short description: | p@chr1:174128738..174128756, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174128738..174128756, + |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.48e-17 | 75 |
central nervous system | 5.36e-16 | 73 |
ectoderm-derived structure | 3.08e-12 | 95 |
ectoderm | 3.08e-12 | 95 |
presumptive ectoderm | 3.08e-12 | 95 |
gray matter | 1.50e-10 | 34 |
regional part of nervous system | 1.88e-10 | 54 |
neural tube | 1.22e-09 | 52 |
neural rod | 1.22e-09 | 52 |
future spinal cord | 1.22e-09 | 52 |
neural keel | 1.22e-09 | 52 |
substantia nigra | 2.93e-09 | 3 |
telencephalic nucleus | 2.93e-09 | 3 |
midbrain nucleus | 2.93e-09 | 3 |
neural nucleus | 2.93e-09 | 3 |
nucleus of brain | 2.93e-09 | 3 |
brain grey matter | 2.47e-07 | 29 |
regional part of telencephalon | 2.47e-07 | 29 |
telencephalon | 2.47e-07 | 29 |
neurectoderm | 3.51e-07 | 64 |
neural plate | 3.51e-07 | 64 |
presumptive neural plate | 3.51e-07 | 64 |
regional part of brain | 4.37e-07 | 46 |
regional part of midbrain | 5.04e-07 | 4 |
midbrain | 5.04e-07 | 4 |
presumptive midbrain | 5.04e-07 | 4 |
midbrain neural tube | 5.04e-07 | 4 |
brain | 7.05e-07 | 47 |
future brain | 7.05e-07 | 47 |