FFCP PHASE1:Hg19::chr6:16699727..16699740,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C489 | |||
|description=CAGE_peak_at_chr6:16699727..16699740,- | |||
|id=chr6:16699727..16699740,- | |||
|ontology_enrichment_celltype=CL:0000738!1.84e-41!140;CL:0002057!5.14e-39!42;CL:0002031!3.77e-36!124;CL:0000860!6.63e-36!45;CL:0002087!8.39e-34!119;CL:0000988!4.27e-33!182;CL:0000037!9.62e-33!172;CL:0000566!9.62e-33!172;CL:0002032!1.13e-31!165;CL:0000837!1.13e-31!165;CL:0000766!2.46e-29!76;CL:0000557!1.24e-27!71;CL:0002009!1.79e-26!65;CL:0000839!9.23e-24!70;CL:0002194!5.08e-23!63;CL:0000576!5.08e-23!63;CL:0000040!5.08e-23!63;CL:0000559!5.08e-23!63;CL:0000763!1.58e-21!112;CL:0000049!1.58e-21!112;CL:0000791!2.35e-16!18;CL:0000789!2.35e-16!18;CL:0002420!2.35e-16!18;CL:0002419!2.35e-16!18;CL:0000790!2.35e-16!18;CL:0000084!3.38e-13!25;CL:0000827!3.38e-13!25;CL:0000624!1.79e-11!6;CL:0000134!1.81e-11!358;CL:0002320!5.47e-11!365;CL:0000219!1.62e-10!390;CL:0000767!6.86e-10!3;CL:0000623!9.69e-10!3;CL:0000825!9.69e-10!3;CL:0000838!1.20e-09!52;CL:0000542!2.16e-09!53;CL:0000051!2.16e-09!53;CL:0000625!1.58e-08!11;CL:0000034!9.10e-08!444;CL:0000723!1.51e-07!436;CL:0001014!2.40e-07!2;CL:0001016!2.40e-07!2;CL:0000048!2.53e-07!430;CL:0000080!7.26e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.40e-30;33!CL:0002057;4.40e-30;33!CL:0000576;6.47e-22;48!CL:0000473;1.05e-21;39!CL:0000234;1.05e-21;39!CL:0000767;4.92e-20;3!CL:0000766;1.18e-19;69!CL:0000623;1.87e-19;3!CL:0001014;2.00e-14;2!CL:0001016;2.00e-14;2!CL:0002087;3.81e-11;104!CL:0002393;5.37e-10;6!CL:0002397;5.37e-10;6!CL:0000624;8.01e-10;6!CL:0000738;1.22e-08;136!CL:0000791;1.73e-08;18!CL:0000789;1.73e-08;18!CL:0002419;1.73e-08;18!CL:0000094;8.04e-08;8!CL:0000895;1.68e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.28e-39,42;CL:0002057,3.28e-39,42;CL:0000738,8.73e-39,136;CL:0002031,2.03e-35,120;CL:0000473,7.03e-34,48;CL:0000234,7.03e-34,48;CL:0000766,2.10e-33,72;CL:0000557,1.20e-32,67;CL:0002009,1.57e-32,61;CL:0002032,5.41e-32,161;CL:0000837,5.41e-32,161;CL:0000037,1.89e-30,168;CL:0002087,9.94e-29,115;CL:0000988,1.21e-28,177;CL:0002194,2.06e-26,59;CL:0000576,2.06e-26,59;CL:0000040,2.06e-26,59;CL:0000559,2.06e-26,59;CL:0000839,2.87e-26,66;CL:0000763,6.95e-26,108;CL:0000049,6.95e-26,108;CL:0000767,4.35e-20,3;CL:0000623,9.37e-20,3;CL:0000825,9.37e-20,3;CL:0001014,1.95e-14,2;CL:0001016,1.95e-14,2;CL:0000134,1.19e-11,354;CL:0002320,2.56e-11,361;CL:0000219,3.83e-10,386;CL:0000624,8.54e-10,6;CL:0000034,3.54e-09,441;CL:0000048,1.06e-08,427;CL:0000723,1.67e-08,433;CL:0000791,1.76e-08,18;CL:0000789,1.76e-08,18;CL:0002420,1.76e-08,18;CL:0002419,1.76e-08,18;CL:0000790,1.76e-08,18;CL:0000094,7.68e-08,8;CL:0000810,1.58e-07,1;CL:0000895,1.58e-07,1;CL:0002436,1.58e-07,1;CL:0002427,1.58e-07,1;CL:0002428,1.58e-07,1;CL:0002429,1.58e-07,1;CL:0002433,1.58e-07,1;CL:0002431,1.58e-07,1;CL:0002432,1.58e-07,1;CL:0002393,6.85e-07,9;CL:0002397,6.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-30;42!CL:0000790;1.73e-08;18!CL:0002427;1.68e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.43e-24!102;UBERON:0003061!4.43e-24!102;UBERON:0002371!1.30e-23!80;UBERON:0001474!2.11e-21!86;UBERON:0002193!4.27e-21!112;UBERON:0004765!2.04e-18!101;UBERON:0001434!2.04e-18!101;UBERON:0002405!2.14e-16!115;UBERON:0002384!2.46e-10!375;UBERON:0002204!4.70e-08!167;UBERON:0003081!9.00e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.35e-28,76;UBERON:0001474,5.18e-26,82;UBERON:0002405,5.02e-25,93;UBERON:0002390,1.51e-23,98;UBERON:0003061,1.51e-23,98;UBERON:0004765,2.29e-23,90;UBERON:0002193,5.37e-21,108;UBERON:0001434,1.19e-20,100;UBERON:0002384,7.28e-11,371;UBERON:0002204,8.60e-11,167;UBERON:0003081,3.06e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,3.54027849164014,3.0706351847777,1.54816123316076,0,0,0,0,0,0,2.76997704265939,1.40381113229099,1.73608696572681,0,0,0,0,0.377875943688809,0.242584061187816,0,1.6446715520873,0.619412741790207,0.863077176966451,0.512321413058201,1.89185783910868,3.10271112662957,1.29096936716765,2.70852973188684,1.12945403725563,0.272906150057846,0.674170453335254,0.918251677112708,1.92557416245656,0,0,0.199463657621632,0,1.16083695451434,1.70215567407342,0,1.00499466102697,1.0429658368404,1.3031330682307,0,2.20966581592539,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1655941927969,0,1.57367816091066,1.17903228824749,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,1.53288197440768,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0,0,2.82249440514625,0.802320587350522,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,1.72502059887614,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,4.27450393947851,6.96421759102155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:16699727..16699740,- | |||
}} |
Revision as of 10:15, 22 January 2014
Short description: | p@chr6:16699727..16699740, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:16699727..16699740, - |
Coexpression cluster: | C489_immature_CD14_Natural_Basophils_CD8_CD4_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.35e-28 | 76 |
bone element | 5.18e-26 | 82 |
immune system | 5.02e-25 | 93 |
hematopoietic system | 1.51e-23 | 98 |
blood island | 1.51e-23 | 98 |
skeletal element | 2.29e-23 | 90 |
hemolymphoid system | 5.37e-21 | 108 |
skeletal system | 1.19e-20 | 100 |
connective tissue | 7.28e-11 | 371 |
musculoskeletal system | 8.60e-11 | 167 |
lateral plate mesoderm | 3.06e-09 | 203 |