FFCP PHASE1:Mm9::chr1:137051218..137051263,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=558|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:137051218..137051263,+|id=chr1:137051218..137051263,+|ontology_enrichment_celltype=CL:0000221!1.77e-22!44;CL:0000133!1.77e-22!44;CL:0002319!8.11e-22!43;CL:0000055!8.76e-18!50;CL:0000540!5.16e-17!33;CL:0000047!5.16e-17!33;CL:0000031!5.16e-17!33;CL:0000404!5.16e-17!33;CL:0000393!5.06e-14!39;CL:0000211!5.06e-14!39;CL:0000117!2.32e-11!23;CL:0000337!2.32e-11!23;CL:0002321!6.76e-07!70;CL:0000220!6.76e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.35e-28,44;CL:0000133,1.35e-28,44;CL:0002319,1.04e-27,43;CL:0000540,2.30e-22,33;CL:0000047,2.30e-22,33;CL:0000031,2.30e-22,33;CL:0000404,2.30e-22,33;CL:0000393,1.09e-17,39;CL:0000211,1.09e-17,39;CL:0000117,9.52e-15,23;CL:0000337,9.52e-15,23;CL:0002321,3.05e-12,70;CL:0002453,1.87e-08,8;CL:0000107,4.55e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.27e-40!102;UBERON:0000924!4.27e-40!102;UBERON:0006601!4.27e-40!102;UBERON:0001017!1.57e-39!73;UBERON:0005743!1.57e-39!73;UBERON:0000073!8.41e-39!75;UBERON:0001016!8.41e-39!75;UBERON:0002346!3.47e-28!71;UBERON:0003075!3.47e-28!71;UBERON:0007284!3.47e-28!71;UBERON:0000033!1.04e-27!63;UBERON:0001049!1.76e-25!52;UBERON:0005068!1.76e-25!52;UBERON:0006241!1.76e-25!52;UBERON:0007135!1.76e-25!52;UBERON:0000955!1.80e-24!50;UBERON:0006238!1.80e-24!50;UBERON:0002616!7.08e-24!49;UBERON:0003056!3.34e-19!49;UBERON:0003080!5.65e-18!40;UBERON:0002780!2.38e-17!39;UBERON:0001890!2.38e-17!39;UBERON:0006240!2.38e-17!39;UBERON:0002020!6.39e-17!34;UBERON:0002791!3.74e-14!29;UBERON:0003528!3.74e-14!29;UBERON:0001893!3.74e-14!29;UBERON:0007811!3.45e-12!86;UBERON:0000153!4.39e-11!94;UBERON:0000956!3.65e-10!21;UBERON:0001869!3.65e-10!21;UBERON:0000203!3.65e-10!21;UBERON:0002619!5.95e-09!17;UBERON:0004111!8.84e-09!122;UBERON:0003076!4.05e-08!12;UBERON:0003057!4.05e-08!12;UBERON:0000468!7.30e-08!333;UBERON:0000025!2.88e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.07e-53,73;UBERON:0001016,1.48e-50,75;UBERON:0004121,4.45e-50,95;UBERON:0000924,4.45e-50,95;UBERON:0006601,4.45e-50,95;UBERON:0002346,1.97e-36,64;UBERON:0003075,1.97e-36,64;UBERON:0007284,1.97e-36,64;UBERON:0000073,9.42e-36,54;UBERON:0010371,2.04e-34,73;UBERON:0001049,8.64e-34,52;UBERON:0005068,8.64e-34,52;UBERON:0006241,8.64e-34,52;UBERON:0007135,8.64e-34,52;UBERON:0000955,1.47e-29,47;UBERON:0006238,1.47e-29,47;UBERON:0002616,9.00e-29,46;UBERON:0010314,1.80e-27,92;UBERON:0003056,6.02e-24,49;UBERON:0003080,1.17e-23,40;UBERON:0002780,8.11e-23,39;UBERON:0001890,8.11e-23,39;UBERON:0006240,8.11e-23,39;UBERON:0002020,3.07e-22,34;UBERON:0003528,1.65e-18,29;UBERON:0002791,1.65e-18,29;UBERON:0001893,1.65e-18,29;UBERON:0000956,3.87e-13,21;UBERON:0001869,3.87e-13,21;UBERON:0000203,3.87e-13,21;UBERON:0002619,1.65e-11,17;UBERON:0004111,2.20e-11,122;UBERON:0003076,2.17e-10,12;UBERON:0003057,2.17e-10,12;UBERON:0000025,1.01e-09,114;UBERON:0011216,2.50e-09,194;UBERON:0002410,4.55e-08,9;UBERON:0002021,6.15e-07,10;UBERON:0000411,6.15e-07,10;UBERON:0001950,6.15e-07,10|phase1_expression=5.92550734287738,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.04103896362567,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,6.25913075478431,31.6136476751647,33.3922997756397,33.8308024389253,9.79904951377538,27.3129872293446,0,0,0,0,0.573066879877513,1.03134418455488,4.24864567805155,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0.988866362566974,0,45.5392167987975,80.3016258122049,1.03689612308478,2.70011876663381,3.15487442027073,11.1403883917483,8.39300455616131,2.20483438586917,2.58782771749238,4.5960939330501,20.9220173898839,11.3641730895817,19.6616362567992,2.37395317914349,3.84248103130121,3.64639359389732,15.9134309430787,18.5711661310454,16.0438160165651,11.490514833473,9.39653093274079,5.77838282058432,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,11.6900038414645,0,0,0,0,0,0,0,0.776813650941515,1.1875371125186,0.346970653532272,0.304465478312141,0.922461989024234,1.20578112442098,2.58695155698551,0.753999547978053,1.23597483867187,1.01219549843938,0,0.647067399789637,0.441683036920787,0.969750506270444,1.86391761218122,12.8823550685081,10.4723353406728,0.510914110417183,0,0,0,11.5338792341713,7.32000964509802,5.40313714085317,10.4294592115366,10.9957646652042,13.9217989854905,7.94982189032012,1.83310854930569,0.746441823660558,0,1.47309299120532,0.780722657776222,1.14951052216736,0.720248519221397,1.20563854268572,2.4493139694478,1.40925092313335,1.21812241927647,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,1.07986979021165,0,0.268273401399619,0.9341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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=558 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:137051218..137051263,+ | |||
|description=CAGE_peak_at_chr1:137051218..137051263,+ | |||
|id=chr1:137051218..137051263,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.77e-22!44;CL:0000133!1.77e-22!44;CL:0002319!8.11e-22!43;CL:0000055!8.76e-18!50;CL:0000540!5.16e-17!33;CL:0000047!5.16e-17!33;CL:0000031!5.16e-17!33;CL:0000404!5.16e-17!33;CL:0000393!5.06e-14!39;CL:0000211!5.06e-14!39;CL:0000117!2.32e-11!23;CL:0000337!2.32e-11!23;CL:0002321!6.76e-07!70;CL:0000220!6.76e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.35e-28,44;CL:0000133,1.35e-28,44;CL:0002319,1.04e-27,43;CL:0000540,2.30e-22,33;CL:0000047,2.30e-22,33;CL:0000031,2.30e-22,33;CL:0000404,2.30e-22,33;CL:0000393,1.09e-17,39;CL:0000211,1.09e-17,39;CL:0000117,9.52e-15,23;CL:0000337,9.52e-15,23;CL:0002321,3.05e-12,70;CL:0002453,1.87e-08,8;CL:0000107,4.55e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.27e-40!102;UBERON:0000924!4.27e-40!102;UBERON:0006601!4.27e-40!102;UBERON:0001017!1.57e-39!73;UBERON:0005743!1.57e-39!73;UBERON:0000073!8.41e-39!75;UBERON:0001016!8.41e-39!75;UBERON:0002346!3.47e-28!71;UBERON:0003075!3.47e-28!71;UBERON:0007284!3.47e-28!71;UBERON:0000033!1.04e-27!63;UBERON:0001049!1.76e-25!52;UBERON:0005068!1.76e-25!52;UBERON:0006241!1.76e-25!52;UBERON:0007135!1.76e-25!52;UBERON:0000955!1.80e-24!50;UBERON:0006238!1.80e-24!50;UBERON:0002616!7.08e-24!49;UBERON:0003056!3.34e-19!49;UBERON:0003080!5.65e-18!40;UBERON:0002780!2.38e-17!39;UBERON:0001890!2.38e-17!39;UBERON:0006240!2.38e-17!39;UBERON:0002020!6.39e-17!34;UBERON:0002791!3.74e-14!29;UBERON:0003528!3.74e-14!29;UBERON:0001893!3.74e-14!29;UBERON:0007811!3.45e-12!86;UBERON:0000153!4.39e-11!94;UBERON:0000956!3.65e-10!21;UBERON:0001869!3.65e-10!21;UBERON:0000203!3.65e-10!21;UBERON:0002619!5.95e-09!17;UBERON:0004111!8.84e-09!122;UBERON:0003076!4.05e-08!12;UBERON:0003057!4.05e-08!12;UBERON:0000468!7.30e-08!333;UBERON:0000025!2.88e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.07e-53,73;UBERON:0001016,1.48e-50,75;UBERON:0004121,4.45e-50,95;UBERON:0000924,4.45e-50,95;UBERON:0006601,4.45e-50,95;UBERON:0002346,1.97e-36,64;UBERON:0003075,1.97e-36,64;UBERON:0007284,1.97e-36,64;UBERON:0000073,9.42e-36,54;UBERON:0010371,2.04e-34,73;UBERON:0001049,8.64e-34,52;UBERON:0005068,8.64e-34,52;UBERON:0006241,8.64e-34,52;UBERON:0007135,8.64e-34,52;UBERON:0000955,1.47e-29,47;UBERON:0006238,1.47e-29,47;UBERON:0002616,9.00e-29,46;UBERON:0010314,1.80e-27,92;UBERON:0003056,6.02e-24,49;UBERON:0003080,1.17e-23,40;UBERON:0002780,8.11e-23,39;UBERON:0001890,8.11e-23,39;UBERON:0006240,8.11e-23,39;UBERON:0002020,3.07e-22,34;UBERON:0003528,1.65e-18,29;UBERON:0002791,1.65e-18,29;UBERON:0001893,1.65e-18,29;UBERON:0000956,3.87e-13,21;UBERON:0001869,3.87e-13,21;UBERON:0000203,3.87e-13,21;UBERON:0002619,1.65e-11,17;UBERON:0004111,2.20e-11,122;UBERON:0003076,2.17e-10,12;UBERON:0003057,2.17e-10,12;UBERON:0000025,1.01e-09,114;UBERON:0011216,2.50e-09,194;UBERON:0002410,4.55e-08,9;UBERON:0002021,6.15e-07,10;UBERON:0000411,6.15e-07,10;UBERON:0001950,6.15e-07,10 | |||
|phase1_expression=5.92550734287738,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.04103896362567,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,6.25913075478431,31.6136476751647,33.3922997756397,33.8308024389253,9.79904951377538,27.3129872293446,0,0,0,0,0.573066879877513,1.03134418455488,4.24864567805155,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0.988866362566974,0,45.5392167987975,80.3016258122049,1.03689612308478,2.70011876663381,3.15487442027073,11.1403883917483,8.39300455616131,2.20483438586917,2.58782771749238,4.5960939330501,20.9220173898839,11.3641730895817,19.6616362567992,2.37395317914349,3.84248103130121,3.64639359389732,15.9134309430787,18.5711661310454,16.0438160165651,11.490514833473,9.39653093274079,5.77838282058432,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,11.6900038414645,0,0,0,0,0,0,0,0.776813650941515,1.1875371125186,0.346970653532272,0.304465478312141,0.922461989024234,1.20578112442098,2.58695155698551,0.753999547978053,1.23597483867187,1.01219549843938,0,0.647067399789637,0.441683036920787,0.969750506270444,1.86391761218122,12.8823550685081,10.4723353406728,0.510914110417183,0,0,0,11.5338792341713,7.32000964509802,5.40313714085317,10.4294592115366,10.9957646652042,13.9217989854905,7.94982189032012,1.83310854930569,0.746441823660558,0,1.47309299120532,0.780722657776222,1.14951052216736,0.720248519221397,1.20563854268572,2.4493139694478,1.40925092313335,1.21812241927647,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,1.07986979021165,0,0.268273401399619,0.934122738937356,0.16455984991348,0,1.21603214318784,0.584799949701329,0.439100230582101,0.536825675041487,11.3556572224629,6.27718135513635,0,0.528901133327089,0.639864751605702,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,0,1.15289268306808,0,0.397912944082302,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0,0.350679099451593,0.379419222745544,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,1.47802552133284,0.757965647081939,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,1.56106918286239,0.788175720530955,0.8858587585951,0.637819074629948,1.3109065177259,0.690739927463582,0.144649058581512,0,0,0,0.551873492609465,13.6468001489623,10.6662634798905,0,1.00988370881749,4.41711507182759,3.90438744296638,16.8030250231583,12.1874086955802,27.6270355862169,26.8922704249391,5.26253912177363,10.2289550268959,15.8115111178609,8.67567554338879,0.567760340833074,0.178065603667255,1.30309567482861,1.15479086080775,0,0,0,0.377210159511796,0,0.307435147943927,1.29214146584111,0,0.712994756769443,0.316036757935816,0,0,1.70219802876894,1.08036656418786,3.49268446213437,1.28602221018955,1.24138163549592,1.42695054081656,2.30368628842969,5.48036908406279,0,0.847328283455281,1.10264199027481,2.14352128823924,1.13025098687134,0.482503399425247,0.119372344003136,0.164140899745061,1.1659233465194,15.9465759729038,0.170870880797853,0,0,0.188368457004691,0,0,0.169978429993855,0,0,1.90934123603023,0.949007980743406,0.813277868507395,0.108005340821801,1.04544148007234,1.09181281873089,0.944050424693745,0.909188012978695,0.785267825952089,0.777689839750757,1.24267862617385,0,0.299033092087958,0.330916980914195,1.55560950675238,1.29159823477731,1.68956125490778,3.99014611395563,0.651021924219751,0.419437377702843,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,3.85441652145859,0,0,0,2.12508553435409,0,0.549454872801795,0.428736758158132,0.501572104035363,3.3885110557024,5.06357760157895,2.29158205375759,4.98374228796694,6.16574267793578,3.7769694869485,4.72515750162264,7.20513925158753,8.60970577069989,4.14208249401456,0.207574695168353,0.798049746802062,0.682934423016537,0.729320151204882,1.25767897576789,1.10306105070008,0.888986911206461,1.23621034343337,0.64183841918363,1.76888048234658,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,1.03383844120104,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.470546902076653,1.18460451048347,0.548783918618318,1.05227884575137,0.814824683075171,2.80571135828869,1.30498519936592,0.886540341380071,0.409231043169689,0.929621047115796,0.964533054905707,2.49810577937946,1.87145286756327,0.859484216193193,2.10417165275728,1.54413993383661,0.927471342481686 | |||
|short_description=p@chr1:137051218..137051263,+ | |||
}} |
Latest revision as of 20:40, 4 August 2015
Short description: | p@chr1:137051218..137051263, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:137051218..137051263, + |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.35e-28 | 44 |
neurectodermal cell | 1.35e-28 | 44 |
neural cell | 1.04e-27 | 43 |
neuron | 2.30e-22 | 33 |
neuronal stem cell | 2.30e-22 | 33 |
neuroblast | 2.30e-22 | 33 |
electrically signaling cell | 2.30e-22 | 33 |
electrically responsive cell | 1.09e-17 | 39 |
electrically active cell | 1.09e-17 | 39 |
CNS neuron (sensu Vertebrata) | 9.52e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.52e-15 | 23 |
embryonic cell | 3.05e-12 | 70 |
oligodendrocyte precursor cell | 1.87e-08 | 8 |
autonomic neuron | 4.55e-08 | 9 |