FFCP PHASE1:Hg19::chr6:144606817..144606833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12635 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SYY2 | |||
|association_with_transcript=-3bp_to_ENST00000433557_5end | |||
|description=CAGE_peak_10_at_UTRN_5end | |||
|id=chr6:144606817..144606833,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.34e-23!76;CL:0002057!3.63e-23!42;CL:0002194!1.97e-20!63;CL:0000576!1.97e-20!63;CL:0000040!1.97e-20!63;CL:0000559!1.97e-20!63;CL:0000860!2.59e-20!45;CL:0002009!7.63e-19!65;CL:0000557!1.61e-18!71;CL:0000839!6.66e-18!70;CL:0000763!8.13e-15!112;CL:0000049!8.13e-15!112;CL:0002320!3.59e-09!365;CL:0000134!1.24e-08!358;CL:0002393!4.66e-07!9;CL:0002397!4.66e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-28;33!CL:0002057;2.03e-28;33!CL:0000576;1.29e-23;48!CL:0000473;2.31e-23;39!CL:0000234;2.31e-23;39!CL:0000766;3.51e-17;69!CL:0000763;1.60e-09;100!CL:0002393;8.67e-09;6!CL:0002397;8.67e-09;6!CL:0000094;3.15e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.00e-42,42;CL:0002057,3.00e-42,42;CL:0000473,2.75e-41,48;CL:0000234,2.75e-41,48;CL:0000766,2.83e-36,72;CL:0002194,5.20e-33,59;CL:0000576,5.20e-33,59;CL:0000040,5.20e-33,59;CL:0000559,5.20e-33,59;CL:0002009,1.93e-31,61;CL:0000557,4.18e-29,67;CL:0000839,6.10e-28,66;CL:0000763,2.38e-25,108;CL:0000049,2.38e-25,108;CL:0000738,5.10e-16,136;CL:0000037,1.01e-14,168;CL:0002087,3.57e-13,115;CL:0000988,4.64e-13,177;CL:0002032,1.18e-12,161;CL:0000837,1.18e-12,161;CL:0002393,1.78e-12,9;CL:0002397,1.78e-12,9;CL:0002320,4.81e-11,361;CL:0000134,8.20e-11,354;CL:0002031,1.10e-10,120;CL:0000094,1.02e-08,8;CL:0000219,9.28e-08,386;CL:0000034,2.19e-07,441;CL:0000048,2.26e-07,427;CL:0000723,6.13e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.63e-30;42!CL:0000049;4.47e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.39e-17!102;UBERON:0003061!2.39e-17!102;UBERON:0002371!1.30e-16!80;UBERON:0002193!2.09e-16!112;UBERON:0001474!3.82e-14!86;UBERON:0002405!4.12e-14!115;UBERON:0004765!1.33e-12!101;UBERON:0001434!1.33e-12!101;UBERON:0007023!2.83e-10!115;UBERON:0002384!3.36e-09!375;UBERON:0002204!7.60e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-25,98;UBERON:0003061,1.66e-25,98;UBERON:0002371,2.80e-25,76;UBERON:0002193,1.38e-22,108;UBERON:0001474,2.49e-22,82;UBERON:0004765,3.55e-21,90;UBERON:0002405,5.60e-19,93;UBERON:0001434,1.25e-18,100;UBERON:0002204,5.08e-12,167;UBERON:0003081,1.11e-10,203;UBERON:0002384,1.47e-10,371;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315 | |||
|phase1_expression=0.908391896352783,1.2846031433459,1.26858963686374,0,2.23480547213644,0,0,0.631719873426831,0,0,0,0,0,0.37129905888014,2.31978163009541,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,1.57345710739562,1.91914699048606,0.619264493264304,0,0.30120591877825,0,0,0,2.05520307534393,4.43196326825502,5.01361118675354,1.08505435357926,1.11957737119962,0.32389366601898,0.77272670290256,2.03557534291391,4.1566353805769,4.12392904019288,1.62700325833979,1.23350366406548,1.54853185447552,3.74000110018796,2.81776777182011,2.12834006899727,2.06847408441971,4.51839278508678,0,2.25890807451126,1.91034305040492,2.47195832889593,3.67300670845083,1.28371610830437,2.55734850319616,8.57613380485462,6.58230070151385,8.52449501065388,2.61188314765726,0.56738522469114,1.24564449799115,4.77372463987812,1.0429658368404,2.17188844705117,4.23779651843358,1.47311054395026,0.949387162322653,3.16882929467913,2.33864729961548,3.35453832813401,2.47122988522289,3.15371474967163,4.33959084082116,3.70516566863623,3.58050018958362,4.38393969035121,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,1.31692042387539,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.710331756132051,0,0.80642697289893,0.267440195783507,0.434473211648397,0,0.670700859703636,0.12786256184353,1.80719576192283,1.50401373190767,0.434539556882471,0,0.486634870302636,0.378139268656271,0.221729397462564,0.087834785693126,0.261958150995425,0,0,1.29818957461873,0.348259474598534,0.664789802594326,0.953962497221368,1.14398982156026,1.85728750664782,0,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0,0,1.47065232138347,0,0.17859945656816,0.22452937262617,0,0,0,0,2.63560834872127,7.75560528296651,0,0.496971951695318,0.25326102332916,1.72131935057184,1.14734648299525,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.538842688278752,1.14423332179421,0.454072282934794,1.15235184896,0,0.624320153660641,0,0.149448680551801,0.587172493218824,0.161872944368132,0.561803226808994,0,0,0.723280468230358,2.37600571456411,2.22540236350701,0,0.718618141816238,0,0.375355559615893,0,0.877955241761676,0,0.150238058906597,0,3.7671823494661,0.213557388818567,0.423863802319124,3.90118424909723,1.33968288009971,4.3798891807757,0.558350568994769,0.168776332241266,1.16924406193438,4.29137416214995,1.10459878370759,4.0411514204703,2.13005755509969,1.10827308050404,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0.769494313892781,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,1.52203321787679,0,0,1.72351904261178,0.234004265139238,0.297262324577456,0,0.335964256397719,0,0.268675568108545,0.581267877027924,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0,0.336393253036082,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0.871533458600294,0.199945982364114,1.2162378064119,0.502257091432126,2.10833939483032,0.718874566474748,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,1.57624608161542,1.50939302401662,0.513372145118994,0,0,0.773288812777695,0.167516265334349,0,6.74106321552464,2.99161459204025,7.87389475528467,0.858840442033979,0,1.08506009479894,1.24782516918484,1.60586089917446,0.788512075169673,0.937131319941706,0.902838299183157,0,0,0,0.184369168541703,0.434418072340414,0.195801157462741,0.343143423810856,1.6541442089831,1.2942852049117,0.74709290462411,0,0,0,1.24053903909388,2.30192959932094,1.12264037773229,0.768834895534206,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0,0.459257792658427,1.0925470080403,0.524497659837696,0,0.308061348417659,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.824328093181778,0.27470839445503,0,0,0,3.21367859688319,0.096670718292122,0.462145851343933,1.22802939780904,0.413509717453592,1.28904293841928,2.0302337147992,0.170453254832202,0.445160178233687,0.165284915360978,0.192190067365106,0.382838137483752,0,0.464845549297286,2.20368642781448,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0.949138274156178,1.33441135746677,0,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0.424216295861138,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0,0.294747123039363,0,0,0.633322905892992,2.30506425071931,0,0.349934720244983,0,0,0,1.03558180854457,0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| |||
|short_description=p10@UTRN | |||
}} |
Revision as of 14:25, 22 January 2014
Short description: | p10@UTRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_UTRN_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000433557_5end |
EntrezGene: | UTRN |
HGNC: | 12635 |
UniProt: | Q5SYY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-25 | 98 |
blood island | 1.66e-25 | 98 |
bone marrow | 2.80e-25 | 76 |
hemolymphoid system | 1.38e-22 | 108 |
bone element | 2.49e-22 | 82 |
skeletal element | 3.55e-21 | 90 |
immune system | 5.60e-19 | 93 |
skeletal system | 1.25e-18 | 100 |
musculoskeletal system | 5.08e-12 | 167 |
lateral plate mesoderm | 1.11e-10 | 203 |
connective tissue | 1.47e-10 | 371 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |