FFCP PHASE1:Mm9::chr19:6299726..6299748,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:6299726..6299748,+|id=chr19:6299726..6299748,+|ontology_enrichment_celltype=CL:0000049!4.25e-08!19;CL:0000557!8.24e-08!7|ontology_enrichment_celltype_v019_2=CL:0000049,2.97e-11,19;CL:0000557,1.74e-10,7;CL:0000034,6.52e-10,97;CL:0002320,1.45e-08,46;CL:0000134,1.45e-08,46;CL:0000219,4.44e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.35e-14,3;DOID:4045,1.35e-14,3;DOID:0050686,1.50e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-08,46;UBERON:0002204,4.09e-08,32;UBERON:0002371,7.36e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0.84877930359606,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,12.5559489221072,5.4693474116666,3.14114246384279,42.352667138233,15.7100461540443,5.82612423637384,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95674772884027,2.58127163094416,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,7.0690923458493,14.3976655438418,5.59108999121485,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,3.51106593656617,6.17634977075316,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,10.538662659619,13.4353394230712,6.63359874261234,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr19:6299726..6299748,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:6299726..6299748,+ | |||
|description=CAGE_peak_at_chr19:6299726..6299748,+ | |||
|id=chr19:6299726..6299748,+ | |||
|ontology_enrichment_celltype=CL:0000049!4.25e-08!19;CL:0000557!8.24e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.97e-11,19;CL:0000557,1.74e-10,7;CL:0000034,6.52e-10,97;CL:0002320,1.45e-08,46;CL:0000134,1.45e-08,46;CL:0000219,4.44e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.35e-14,3;DOID:4045,1.35e-14,3;DOID:0050686,1.50e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-08,46;UBERON:0002204,4.09e-08,32;UBERON:0002371,7.36e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0.84877930359606,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,0,0,0,0,0,12.5559489221072,5.4693474116666,3.14114246384279,42.352667138233,15.7100461540443,5.82612423637384,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95674772884027,2.58127163094416,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,7.0690923458493,14.3976655438418,5.59108999121485,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,3.51106593656617,6.17634977075316,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0.327726629431476,0.172684981865896,0.433947175744535,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0,10.538662659619,13.4353394230712,6.63359874261234,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr19:6299726..6299748,+ | |||
}} |
Latest revision as of 12:16, 4 August 2015
Short description: | p@chr19:6299726..6299748, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6299726..6299748, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.97e-11 | 19 |
granulocyte monocyte progenitor cell | 1.74e-10 | 7 |
stem cell | 6.52e-10 | 97 |
connective tissue cell | 1.45e-08 | 46 |
mesenchymal cell | 1.45e-08 | 46 |
motile cell | 4.44e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.45e-08 | 46 |
musculoskeletal system | 4.09e-08 | 32 |
bone marrow | 7.36e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.35e-14 | 3 |
muscle cancer | 1.35e-14 | 3 |
organ system cancer | 1.50e-07 | 6 |