FFCP PHASE1:Mm9::chr19:5069431..5069446,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1323|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:5069431..5069446,+|id=chr19:5069431..5069446,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,7.18e-09,6;CL:0000187,7.18e-09,6;CL:0000056,7.18e-09,6;CL:0000192,1.37e-07,3;CL:0000359,1.37e-07,3;CL:0002539,1.37e-07,3;CL:0000514,1.37e-07,3;CL:0000222,1.57e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.79e-09,4;UBERON:0001637,1.79e-09,4;UBERON:0004573,1.79e-09,4;UBERON:0003509,1.79e-09,4;UBERON:0004571,1.79e-09,4;UBERON:0010191,1.79e-09,4;UBERON:0004572,1.79e-09,4;UBERON:0001135,1.37e-07,3;UBERON:0004237,1.37e-07,3;UBERON:0004695,1.37e-07,3;UBERON:0002111,1.37e-07,3;UBERON:0004178,1.37e-07,3;UBERON:0000055,1.53e-07,5;UBERON:0007500,1.53e-07,5;UBERON:0001981,1.53e-07,5;UBERON:0002049,1.53e-07,5;UBERON:0007798,1.53e-07,5;UBERON:0004537,1.53e-07,5;UBERON:0006965,1.53e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,4.05507724878058,2.38610777810186,12.5182615095686,0.218025156380447,0.219686182734472,0.388859798148567,2.2397827460058,0,0,0,0,1.54355661621568,1.43266719969378,0,0,0,0,0.677689064138264,3.55717918444456,0.449949858640699,2.96659908770092,0,3.89480143673926,3.07374644257244,0,0.135005938331691,0.210324961351382,0,0.662605622854841,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0.365950574409639,0.52091337055676,0,0,0,1.47314292736834,0.569486723196412,0.745597783301202,0.151452386666368,0,0,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,4.4311883870295,1.81850203222008,2.12003744706204,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0,0.352766121407114,0.125666591329675,0.741584903203122,2.4581890676385,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,2.64782346010822,0.124406970610093,0,0.420883711772948,0.260240885925407,0,1.44049703844279,0.452114453507145,0.544291993210623,0.512454881139399,0.281105173679186,1.03481348295606,0.646703978798527,0.756424320671277,1.58356011747554,1.31517439456545,1.66828349535359,3.1342694986995,0.823128545631774,1.39323986772945,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.946978942340841,0.196764231747404,0.617068451549513,0,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0.210289948564127,0,0,0,0.853153002140936,0.928946687441754,0.902072229254653,0,0.444756087689741,0.570676878337677,0.474529061544512,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0,1.32767530667157,0.571242563048644,0,0.203651327845314,0.581857461502877,0.140271639780637,0.252946148497029,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0.947457058852424,2.11854469374634,0.678980343100753,0.938760993154008,1.17254380209271,0.952174563544055,0.390267295715598,1.10344600874334,1.55025282754142,1.2756381492599,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,1.10374698521893,0,0,1.80328439914343,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.425820255624806,1.06839362200353,0.81443479676788,0.659880491890142,0,0.485561272309963,0.604647113929502,0.943025398779491,1.47650946440386,0.922305443831782,0.516856586336442,1.81766864738753,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0,0.713475270408282,0.493647061806363,0.913394847343798,0.23467170806371,0,0.441056796109924,0.98931751764888,1.29171541356724,1.08563264870681,0.477489376012546,0.656563598980245,0.582961673259701,0.18542530201051,0,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,1.09181281873089,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0.645799117388655,0.506868376472335,1.40828686374905,0.781226309063701,0.209718688851422,0,0,0,0.405450430580328,0.821687657318618,0.51968329191118,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.579568782096571,2.43987218086537,1.09890974560359,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0.675022500231806,0,0.906284817968409,0,0,0.798049746802062,0.170733605754134,0.729320151204882,0,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.252697211763798,2.02783439912192,0.754505365544305,0.561849044819294,0.576226371643824,0.574354689556133,0.4762936912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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:5069431..5069446,+ | |||
|description=CAGE_peak_at_chr19:5069431..5069446,+ | |||
|id=chr19:5069431..5069446,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.18e-09,6;CL:0000187,7.18e-09,6;CL:0000056,7.18e-09,6;CL:0000192,1.37e-07,3;CL:0000359,1.37e-07,3;CL:0002539,1.37e-07,3;CL:0000514,1.37e-07,3;CL:0000222,1.57e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.79e-09,4;UBERON:0001637,1.79e-09,4;UBERON:0004573,1.79e-09,4;UBERON:0003509,1.79e-09,4;UBERON:0004571,1.79e-09,4;UBERON:0010191,1.79e-09,4;UBERON:0004572,1.79e-09,4;UBERON:0001135,1.37e-07,3;UBERON:0004237,1.37e-07,3;UBERON:0004695,1.37e-07,3;UBERON:0002111,1.37e-07,3;UBERON:0004178,1.37e-07,3;UBERON:0000055,1.53e-07,5;UBERON:0007500,1.53e-07,5;UBERON:0001981,1.53e-07,5;UBERON:0002049,1.53e-07,5;UBERON:0007798,1.53e-07,5;UBERON:0004537,1.53e-07,5;UBERON:0006965,1.53e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79125362687656,4.05507724878058,2.38610777810186,12.5182615095686,0.218025156380447,0.219686182734472,0.388859798148567,2.2397827460058,0,0,0,0,1.54355661621568,1.43266719969378,0,0,0,0,0.677689064138264,3.55717918444456,0.449949858640699,2.96659908770092,0,3.89480143673926,3.07374644257244,0,0.135005938331691,0.210324961351382,0,0.662605622854841,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0.365950574409639,0.52091337055676,0,0,0,1.47314292736834,0.569486723196412,0.745597783301202,0.151452386666368,0,0,0.860423876981386,0,0,0,0.448026887097336,0.140444420131752,4.4311883870295,1.81850203222008,2.12003744706204,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0,0.352766121407114,0.125666591329675,0.741584903203122,2.4581890676385,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,2.64782346010822,0.124406970610093,0,0.420883711772948,0.260240885925407,0,1.44049703844279,0.452114453507145,0.544291993210623,0.512454881139399,0.281105173679186,1.03481348295606,0.646703978798527,0.756424320671277,1.58356011747554,1.31517439456545,1.66828349535359,3.1342694986995,0.823128545631774,1.39323986772945,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.946978942340841,0.196764231747404,0.617068451549513,0,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,0.210289948564127,0,0,0,0.853153002140936,0.928946687441754,0.902072229254653,0,0.444756087689741,0.570676878337677,0.474529061544512,0,0.251335208800269,0.596869416123452,0.19496408711912,0,0.432276099749388,0,1.32767530667157,0.571242563048644,0,0.203651327845314,0.581857461502877,0.140271639780637,0.252946148497029,0.147610147979602,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0,0.947457058852424,2.11854469374634,0.678980343100753,0.938760993154008,1.17254380209271,0.952174563544055,0.390267295715598,1.10344600874334,1.55025282754142,1.2756381492599,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0,1.10374698521893,0,0,1.80328439914343,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.425820255624806,1.06839362200353,0.81443479676788,0.659880491890142,0,0.485561272309963,0.604647113929502,0.943025398779491,1.47650946440386,0.922305443831782,0.516856586336442,1.81766864738753,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0,0.713475270408282,0.493647061806363,0.913394847343798,0.23467170806371,0,0.441056796109924,0.98931751764888,1.29171541356724,1.08563264870681,0.477489376012546,0.656563598980245,0.582961673259701,0.18542530201051,0,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,1.09181281873089,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0.388902376688095,0.645799117388655,0.506868376472335,1.40828686374905,0.781226309063701,0.209718688851422,0,0,0,0.405450430580328,0.821687657318618,0.51968329191118,0.179026695667481,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0,0.0897138566094757,0.167884616364078,0.579568782096571,2.43987218086537,1.09890974560359,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0.685082519770642,0,0.675022500231806,0,0.906284817968409,0,0,0.798049746802062,0.170733605754134,0.729320151204882,0,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.252697211763798,2.02783439912192,0.754505365544305,0.561849044819294,0.576226371643824,0.574354689556133,0.476293691283074,0.811190281613988,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,1.4198064492747,0.238436189947321,0.290692833264657,0.752875043322645,0.761531471025089,0.548783918618318,0.263069711437843,0.814824683075171,1.12228454331548,0.237270036248348,0.886540341380071,0,0.464810523557898,1.15743966588685,0.749431733813838,0.467863216890817,1.07435527024149,0.765153328275374,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr19:5069431..5069446,+ | |||
}} |
Latest revision as of 07:18, 4 August 2015
Short description: | p@chr19:5069431..5069446, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5069431..5069446, + |
Coexpression cluster: | MCL_coexpression_mm9:1323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.18e-09 | 6 |
muscle cell | 7.18e-09 | 6 |
myoblast | 7.18e-09 | 6 |
smooth muscle cell | 1.37e-07 | 3 |
vascular associated smooth muscle cell | 1.37e-07 | 3 |
aortic smooth muscle cell | 1.37e-07 | 3 |
smooth muscle myoblast | 1.37e-07 | 3 |
mesodermal cell | 1.57e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.79e-09 | 4 |
artery | 1.79e-09 | 4 |
systemic artery | 1.79e-09 | 4 |
arterial blood vessel | 1.79e-09 | 4 |
systemic arterial system | 1.79e-09 | 4 |
aortic system | 1.79e-09 | 4 |
arterial system | 1.79e-09 | 4 |
smooth muscle tissue | 1.37e-07 | 3 |
blood vessel smooth muscle | 1.37e-07 | 3 |
arterial system smooth muscle | 1.37e-07 | 3 |
artery smooth muscle tissue | 1.37e-07 | 3 |
aorta smooth muscle tissue | 1.37e-07 | 3 |
vessel | 1.53e-07 | 5 |
epithelial tube open at both ends | 1.53e-07 | 5 |
blood vessel | 1.53e-07 | 5 |
vasculature | 1.53e-07 | 5 |
vascular system | 1.53e-07 | 5 |
blood vasculature | 1.53e-07 | 5 |
vascular cord | 1.53e-07 | 5 |