FFCP PHASE1:Hg19::chr6:130687570..130687594,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21075 | |||
|TSSclassifier=strong | |||
|UniProt=Q86VY9 | |||
|association_with_transcript=-12bp_to_BC044246_5end | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_4_at_TMEM200A_5end | |||
|id=chr6:130687570..130687594,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.66e-36!180;CL:0000680!6.46e-21!57;CL:0000056!6.46e-21!57;CL:0000355!6.46e-21!57;CL:0000187!1.96e-20!54;CL:0000359!1.30e-19!32;CL:0000192!2.62e-19!42;CL:0000514!2.62e-19!42;CL:0000183!4.77e-18!59;CL:0000393!7.98e-18!60;CL:0000211!7.98e-18!60;CL:0000057!5.00e-17!75;CL:0002334!9.02e-09!12;CL:0002620!2.82e-08!23;CL:0002539!1.52e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.81e-25;32!CL:0000192;2.41e-18;43!CL:0000187;2.86e-12;55!CL:0002334;1.76e-11;12!CL:0000393;4.09e-10;61!CL:0000211;4.09e-10;61!CL:0002539;6.15e-10;10!CL:0002620;3.27e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.39e-26,32;CL:0000192,3.34e-24,43;CL:0000514,3.34e-24,43;CL:0000680,3.20e-23,58;CL:0000056,3.20e-23,58;CL:0000355,3.20e-23,58;CL:0000187,3.98e-23,55;CL:0000393,3.01e-19,61;CL:0000211,3.01e-19,61;CL:0000057,3.70e-15,76;CL:0000723,1.27e-12,433;CL:0000048,1.40e-12,427;CL:0000034,5.49e-12,441;CL:0002334,1.50e-11,12;CL:0002539,7.45e-10,10;CL:0002620,4.01e-09,23;CL:0000222,1.72e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.41e-18;43!CL:0000355;5.33e-12;58 | |||
|ontology_enrichment_disease=DOID:2394!9.12e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.86e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.13e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.20e-20!83;UBERON:0002329!1.20e-20!83;UBERON:0003077!1.20e-20!83;UBERON:0003059!1.20e-20!83;UBERON:0007282!1.20e-20!83;UBERON:0009618!1.20e-20!83;UBERON:0007285!1.20e-20!83;UBERON:0002385!7.56e-19!63;UBERON:0001015!7.56e-19!63;UBERON:0000383!7.56e-19!63;UBERON:0001134!9.95e-19!61;UBERON:0002036!9.95e-19!61;UBERON:0003082!9.95e-19!61;UBERON:0004290!4.33e-18!70;UBERON:0000486!8.72e-16!82;UBERON:0000475!3.44e-13!365;UBERON:0005256!1.37e-11!143;UBERON:0001637!1.56e-11!42;UBERON:0003509!1.56e-11!42;UBERON:0004572!1.56e-11!42;UBERON:0004573!1.17e-10!33;UBERON:0004571!1.17e-10!33;UBERON:0002100!1.50e-08!216;UBERON:0002049!2.24e-08!79;UBERON:0007798!2.24e-08!79;UBERON:0002199!1.38e-07!45;UBERON:0002416!1.38e-07!45;UBERON:0004237!1.52e-07!10;UBERON:0004695!1.52e-07!10;UBERON:0002111!1.52e-07!10;UBERON:0004178!1.52e-07!10;UBERON:0001135!1.54e-07!15;UBERON:0001981!2.36e-07!60;UBERON:0007500!2.36e-07!60;UBERON:0004537!2.36e-07!60;UBERON:0006965!2.36e-07!60;UBERON:0003102!2.72e-07!95;UBERON:0000481!3.65e-07!347;UBERON:0004872!5.78e-07!84;UBERON:0000490!8.35e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.88e-14;33!UBERON:0004571;1.88e-14;33!UBERON:0001637;1.83e-11;42!UBERON:0003509;1.83e-11;42!UBERON:0004572;1.83e-11;42!UBERON:0004237;6.15e-10;10!UBERON:0004695;6.15e-10;10!UBERON:0002111;6.15e-10;10!UBERON:0004178;6.15e-10;10!UBERON:0000947;1.25e-07;21!UBERON:0010191;1.25e-07;21!UBERON:0007500;2.97e-07;56!UBERON:0001981;2.97e-07;56!UBERON:0004537;2.97e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.25e-20,62;UBERON:0002036,1.25e-20,62;UBERON:0003082,1.25e-20,62;UBERON:0002385,1.83e-19,64;UBERON:0001015,1.83e-19,64;UBERON:0000383,1.83e-19,64;UBERON:0007524,6.78e-19,73;UBERON:0002329,7.15e-19,71;UBERON:0003059,7.15e-19,71;UBERON:0007282,7.15e-19,71;UBERON:0004290,7.15e-19,71;UBERON:0009618,7.15e-19,71;UBERON:0003077,2.26e-18,72;UBERON:0007285,2.26e-18,72;UBERON:0001637,2.57e-17,42;UBERON:0003509,2.57e-17,42;UBERON:0004572,2.57e-17,42;UBERON:0000486,2.64e-16,83;UBERON:0004573,4.11e-16,33;UBERON:0004571,4.11e-16,33;UBERON:0007503,1.13e-15,78;UBERON:0007500,1.08e-11,59;UBERON:0001981,1.08e-11,59;UBERON:0004537,1.08e-11,59;UBERON:0006965,1.08e-11,59;UBERON:0002049,2.09e-11,78;UBERON:0007798,2.09e-11,78;UBERON:0005256,7.35e-11,122;UBERON:0004237,7.45e-10,10;UBERON:0004695,7.45e-10,10;UBERON:0002111,7.45e-10,10;UBERON:0004178,7.45e-10,10;UBERON:0004872,2.35e-09,83;UBERON:0003104,6.24e-09,160;UBERON:0009142,6.24e-09,160;UBERON:0000055,1.17e-08,68;UBERON:0000490,4.50e-08,148;UBERON:0000947,1.40e-07,21;UBERON:0010191,1.40e-07,21;UBERON:0004535,1.57e-07,109;UBERON:0002199,1.67e-07,46;UBERON:0002416,1.67e-07,46;UBERON:0002100,1.94e-07,199;UBERON:0003102,4.96e-07,99;UBERON:0001009,5.52e-07,112 | |||
|phase1_expression=4.90531624030503,1.49870366723688,5.63817616383885,1.0007329835313,1.78784437770915,8.72338524100369,5.06599756336621,0.631719873426831,0.261185628199839,0.982935746006035,0,0,0,1.48519623552056,1.32558950291166,4.70627602516243,7.8350288643117,5.11217063271161,6.34312638427659,0.123121058076788,0.612002073732759,0.313454721478088,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0.557052284425868,0,0,0,0.128091319725675,0,0.493313713811028,0.552700035571697,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0.383587685530591,1.80719576192283,2.00535164254356,1.01392563272577,7.95285947051099,0.486634870302636,1.79616152611729,4.21285855178871,2.45937399940753,2.03017567021455,0.728590576585084,0,0.324547393654683,1.0447784237956,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,9.3706578631789,15.756692516773,27.8231522126349,9.930714701554,0.560677600142307,1.06748995729705,0,0.622422070799533,0.134710672069688,0.817309515567294,0.302714855289863,1.15235184896,0.937285727335186,0.936480230490962,0,6.27684458317565,1.40921398372518,0.485618833104395,0.561803226808994,0.204154171254893,0.61417158655884,0.309977343527296,0,1.48360157567134,0.910161361938026,0.718618141816238,0.673344455816265,1.00094815897571,0,1.75591048352335,1.83892677479412,2.85452311922534,0.453728732640084,8.79009214875424,5.55249210928275,4.66250182551036,3.00091096084402,3.81294358182224,5.92573242104947,5.21127197728451,11.1392379279236,6.8205903612839,2.01947019395292,3.03764665519588,3.71785930683267,4.61512470271599,2.41805035746337,2.03472710772585,3.28543450377605,3.54569956768085,0.286804595389004,0.487894824518382,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0,0,2.57296375277154,0,0.928735856063958,3.60939740834793,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,1.8448265781467,3.77449182656756,0.878002283269004,0,2.41269533787914,1.574003567695,1.3032332212413,0,1.44331342025273,1.97081688457631,6.45747818297019,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,2.51973192298289,3.1190521393325,2.05984602216551,2.03443756959773,4.21720947081732,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,1.68196626518041,1.30788020649984,3.30022286194275,28.0519623194378,0,0,13.2969058292435,8.32059495290929,1.54324424557285,1.41849132023278,0.799266537048298,0.285955987316295,0,0,0.325736184293735,0,3.95975936466715,6.33022691825131,10.4584015032035,6.89813639156194,0,0,0,1.67737398844108,0,5.70547620162874,1.15825045334063,2.4657158706046,0.358121926479791,0,0,0,0,3.04913549066956,0,0,0.167516265334349,0,0,0,0,0.12269149171914,2.00068208423871,2.17012018959788,1.66376689224646,1.60586089917446,0.788512075169673,0.702848489956279,3.31040709700491,4.5481500811197,1.03473071292505,13.2845119707087,13.2745801350026,3.5622281931914,0,0.686286847621712,0,0,0,0,0,0,8.43566546583841,7.67309866440312,7.01650236082684,8.71346214938766,8.18731598506726,10.7772127166217,2.96836132889982,5.85996836450091,10.1210183428482,4.84550220481474,5.71179872101983,4.06736324609857,1.0877350463246,1.60405176242628,0.184161977871793,2.98517565227978,4.18809686415449,1.04899531967539,0.451199612907412,2.31046011313244,0,0,0.844413031143006,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0.769350375349168,1.31205858279882,0.650756789328606,0.412164046590889,0,0,1.14853107599234,0.650060246036521,6.42735719376638,2.32009723901093,0.924291702687866,0.767518373630648,1.24052915236078,0.322260734604821,1.45016693914229,1.10794615640931,1.24644849905432,0,0,0,0,4.18360994367557,67.9994669154183,14.6377826733726,3.38836938193698,4.25844824253617,17.3986598415015,14.4552890901058,4.43687148900173,1.116475108079,2.84741482246853,1.5250415513906,1.02359116524534,1.28381696410176,15.5919591483709,2.35484592059769,0.899362287916574,0.54907405947211,1.53156123049392,5.66110948405285,3.17020642346017,1.26377536871694,0,10.7233935437765,14.7910205459458,5.18699663350346,2.12108147930569,5.65040583101214,7.71911480964574,6.6343897524122,7.0152141640602,0,0.655894752046633,10.5513396020606,7.435763954394,9.85934608862845,8.17444707563094,7.27042903497097,10.3434604929563,9.57854872990614,0.844430541190656,0,1.13841952129715,0.699869440489966,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.766021480529467,0,0,0.280797178113459,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0.557216921387392,0,0,0,0,0,0.703347082052564,5.00889172603077,0.16480387422676,0,0,0,3.52705846995986,9.71552483770471,0,7.77598969154519,0,0,0,0.394573622547734,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.120596438625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| |||
|short_description=p4@TMEM200A | |||
}} |
Revision as of 13:52, 22 January 2014
Short description: | p4@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | -12bp_to_BC044246_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.39e-26 | 32 |
smooth muscle cell | 3.34e-24 | 43 |
smooth muscle myoblast | 3.34e-24 | 43 |
muscle precursor cell | 3.20e-23 | 58 |
myoblast | 3.20e-23 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-23 | 58 |
muscle cell | 3.98e-23 | 55 |
electrically responsive cell | 3.01e-19 | 61 |
electrically active cell | 3.01e-19 | 61 |
fibroblast | 3.70e-15 | 76 |
somatic stem cell | 1.27e-12 | 433 |
multi fate stem cell | 1.40e-12 | 427 |
stem cell | 5.49e-12 | 441 |
preadipocyte | 1.50e-11 | 12 |
aortic smooth muscle cell | 7.45e-10 | 10 |
skin fibroblast | 4.01e-09 | 23 |
mesodermal cell | 1.72e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.13e-09 | 14 |