FFCP PHASE1:Mm9::chr19:47062415..47062446,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=142|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47062415..47062446,+|id=chr19:47062415..47062446,+|ontology_enrichment_celltype=CL:0002250!1.29e-15!3;CL:0000223!7.92e-09!20;CL:0002076!1.78e-08!15;CL:0000068!5.01e-08!3;CL:0002202!5.01e-08!3;CL:0000069!5.01e-08!3;CL:0002632!5.01e-08!3;CL:0002368!5.01e-08!3;CL:0000307!5.01e-08!3;CL:0000377!5.01e-08!3;CL:0000066!5.59e-07!25|ontology_enrichment_celltype_v019_2=CL:0000068,3.97e-15,3;CL:0002202,3.97e-15,3;CL:0000069,3.97e-15,3;CL:0002632,3.97e-15,3;CL:0002368,3.97e-15,3;CL:0000307,3.97e-15,3;CL:0000377,3.97e-15,3;CL:0000355,1.10e-11,9|ontology_enrichment_disease=DOID:0060100!3.99e-17!3;DOID:4045!3.99e-17!3;DOID:0050686!7.98e-09!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.69e-33,3;DOID:4045,1.69e-33,3;DOID:0050686,3.63e-17,6|ontology_enrichment_uberon=UBERON:0003126!5.01e-08!3;UBERON:0001005!5.01e-08!3;UBERON:0007196!5.01e-08!3;UBERON:0001558!5.01e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.97e-15,3;UBERON:0001005,3.97e-15,3;UBERON:0007196,3.97e-15,3;UBERON:0001558,3.97e-15,3;UBERON:0001134,1.10e-11,9;UBERON:0002036,1.10e-11,9;UBERON:0002385,1.10e-11,9;UBERON:0000486,1.10e-11,9;UBERON:0007503,1.10e-11,9;UBERON:0001015,1.10e-11,9;UBERON:0002329,1.10e-11,9;UBERON:0003082,1.10e-11,9;UBERON:0003059,1.10e-11,9;UBERON:0007282,1.10e-11,9;UBERON:0004290,1.10e-11,9;UBERON:0009618,1.10e-11,9;UBERON:0000383,1.39e-10,10;UBERON:0007524,1.11e-09,11;UBERON:0003077,1.11e-09,11;UBERON:0007285,1.11e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,7.53356935326434,8.5946887897618,3.66466620781659,4.70585190424811,37.5675016727145,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,2.02687892380079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:47062415..47062446,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:47062415..47062446,+ | |||
|description=CAGE_peak_at_chr19:47062415..47062446,+ | |||
|id=chr19:47062415..47062446,+ | |||
|ontology_enrichment_celltype=CL:0002250!1.29e-15!3;CL:0000223!7.92e-09!20;CL:0002076!1.78e-08!15;CL:0000068!5.01e-08!3;CL:0002202!5.01e-08!3;CL:0000069!5.01e-08!3;CL:0002632!5.01e-08!3;CL:0002368!5.01e-08!3;CL:0000307!5.01e-08!3;CL:0000377!5.01e-08!3;CL:0000066!5.59e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.97e-15,3;CL:0002202,3.97e-15,3;CL:0000069,3.97e-15,3;CL:0002632,3.97e-15,3;CL:0002368,3.97e-15,3;CL:0000307,3.97e-15,3;CL:0000377,3.97e-15,3;CL:0000355,1.10e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.99e-17!3;DOID:4045!3.99e-17!3;DOID:0050686!7.98e-09!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.69e-33,3;DOID:4045,1.69e-33,3;DOID:0050686,3.63e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0003126!5.01e-08!3;UBERON:0001005!5.01e-08!3;UBERON:0007196!5.01e-08!3;UBERON:0001558!5.01e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.97e-15,3;UBERON:0001005,3.97e-15,3;UBERON:0007196,3.97e-15,3;UBERON:0001558,3.97e-15,3;UBERON:0001134,1.10e-11,9;UBERON:0002036,1.10e-11,9;UBERON:0002385,1.10e-11,9;UBERON:0000486,1.10e-11,9;UBERON:0007503,1.10e-11,9;UBERON:0001015,1.10e-11,9;UBERON:0002329,1.10e-11,9;UBERON:0003082,1.10e-11,9;UBERON:0003059,1.10e-11,9;UBERON:0007282,1.10e-11,9;UBERON:0004290,1.10e-11,9;UBERON:0009618,1.10e-11,9;UBERON:0000383,1.39e-10,10;UBERON:0007524,1.11e-09,11;UBERON:0003077,1.11e-09,11;UBERON:0007285,1.11e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,7.53356935326434,8.5946887897618,3.66466620781659,4.70585190424811,37.5675016727145,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,2.02687892380079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:47062415..47062446,+ | |||
}} |
Latest revision as of 06:11, 4 August 2015
Short description: | p@chr19:47062415..47062446, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47062415..47062446, + |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.97e-15 | 3 |
epithelial cell of tracheobronchial tree | 3.97e-15 | 3 |
branched duct epithelial cell | 3.97e-15 | 3 |
epithelial cell of lower respiratory tract | 3.97e-15 | 3 |
respiratory epithelial cell | 3.97e-15 | 3 |
tracheal epithelial cell | 3.97e-15 | 3 |
tracheoblast | 3.97e-15 | 3 |
multi-potent skeletal muscle stem cell | 1.10e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.97e-15 | 3 |
respiratory airway | 3.97e-15 | 3 |
tracheobronchial tree | 3.97e-15 | 3 |
lower respiratory tract | 3.97e-15 | 3 |
skeletal muscle tissue | 1.10e-11 | 9 |
striated muscle tissue | 1.10e-11 | 9 |
muscle tissue | 1.10e-11 | 9 |
multilaminar epithelium | 1.10e-11 | 9 |
epithelial vesicle | 1.10e-11 | 9 |
musculature | 1.10e-11 | 9 |
somite | 1.10e-11 | 9 |
myotome | 1.10e-11 | 9 |
presomitic mesoderm | 1.10e-11 | 9 |
presumptive segmental plate | 1.10e-11 | 9 |
dermomyotome | 1.10e-11 | 9 |
trunk paraxial mesoderm | 1.10e-11 | 9 |
musculature of body | 1.39e-10 | 10 |
dense mesenchyme tissue | 1.11e-09 | 11 |
paraxial mesoderm | 1.11e-09 | 11 |
presumptive paraxial mesoderm | 1.11e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.69e-33 | 3 |
muscle cancer | 1.69e-33 | 3 |
organ system cancer | 3.63e-17 | 6 |