FFCP PHASE1:Hg19::chr6:127840021..127840047,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21494 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJP2 | |||
|association_with_transcript=0bp_to_ENST00000465909_5end | |||
|coexpression_cluster_id=C4555 | |||
|description=CAGE_peak_4_at_C6orf174_5end | |||
|id=chr6:127840021..127840047,- | |||
|ontology_enrichment_celltype=CL:0000055!1.21e-19!180;CL:0002319!9.41e-16!25;CL:0000133!1.62e-14!59;CL:0000393!4.05e-13!60;CL:0000211!4.05e-13!60;CL:0000333!1.49e-10!41;CL:0000183!2.44e-10!59;CL:0000221!6.46e-10!71;CL:0000680!9.34e-10!57;CL:0000056!9.34e-10!57;CL:0000355!9.34e-10!57;CL:0000187!1.44e-09!54;CL:0000095!2.30e-09!17;CL:0000123!2.30e-09!17;CL:0000047!2.28e-08!8;CL:0000243!1.13e-07!15;CL:0000125!1.13e-07!15;CL:0000030!1.13e-07!15;CL:0000339!1.13e-07!15;CL:1000507!2.44e-07!12;CL:1000494!2.44e-07!12;CL:1000497!2.71e-07!18;CL:0002518!2.71e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.73e-13;25!CL:1000497;4.71e-13;17!CL:0002518;4.71e-13;17!CL:1000507;1.02e-12;10!CL:1000494;1.02e-12;10!CL:1000449;5.02e-10;15!CL:0000064;4.32e-07;3!CL:0000067;4.32e-07;3!CL:0005012;4.32e-07;3!CL:0002605;4.32e-07;3!CL:0002304;4.32e-07;3!CL:0000594;5.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,6.99e-15,59;CL:0002319,2.56e-13,25;CL:1000497,2.93e-13,17;CL:0002518,2.93e-13,17;CL:1000507,5.15e-13,10;CL:1000494,5.15e-13,10;CL:0000221,4.04e-11,72;CL:0000047,2.14e-10,8;CL:1000449,3.29e-10,15;CL:0000393,9.70e-09,61;CL:0000211,9.70e-09,61;CL:0000333,5.10e-08,41;CL:0000064,1.85e-07,3;CL:0000067,1.85e-07,3;CL:0005012,1.85e-07,3;CL:0002304,1.85e-07,3;CL:0000594,3.19e-07,3;CL:0002321,6.37e-07,250;CL:0002605,6.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.01e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.24e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.09e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.29e-28!94;UBERON:0001016!6.29e-28!94;UBERON:0001017!7.35e-26!82;UBERON:0005743!2.12e-24!86;UBERON:0000955!1.30e-20!69;UBERON:0006238!1.30e-20!69;UBERON:0002616!3.74e-17!59;UBERON:0001049!7.35e-17!57;UBERON:0005068!7.35e-17!57;UBERON:0006241!7.35e-17!57;UBERON:0007135!7.35e-17!57;UBERON:0004121!8.02e-17!169;UBERON:0000475!1.33e-16!365;UBERON:0003075!2.17e-16!86;UBERON:0007284!2.17e-16!86;UBERON:0000924!2.21e-16!173;UBERON:0006601!2.21e-16!173;UBERON:0002346!1.38e-15!90;UBERON:0000033!1.60e-15!123;UBERON:0003056!1.82e-14!61;UBERON:0000119!4.33e-14!312;UBERON:0000153!8.22e-14!129;UBERON:0007811!8.22e-14!129;UBERON:0000483!3.94e-13!309;UBERON:0002780!5.65e-12!41;UBERON:0001890!5.65e-12!41;UBERON:0006240!5.65e-12!41;UBERON:0000025!6.31e-12!194;UBERON:0003080!1.85e-11!42;UBERON:0000481!2.65e-11!347;UBERON:0002020!3.06e-10!34;UBERON:0003528!3.06e-10!34;UBERON:0004290!3.43e-10!70;UBERON:0000914!4.27e-10!83;UBERON:0002329!4.27e-10!83;UBERON:0003077!4.27e-10!83;UBERON:0003059!4.27e-10!83;UBERON:0007282!4.27e-10!83;UBERON:0009618!4.27e-10!83;UBERON:0007285!4.27e-10!83;UBERON:0001893!8.09e-10!34;UBERON:0002791!1.67e-09!33;UBERON:0000956!2.07e-09!25;UBERON:0000203!2.07e-09!25;UBERON:0001869!3.60e-09!32;UBERON:0004732!8.11e-09!13;UBERON:0001134!2.01e-08!61;UBERON:0002036!2.01e-08!61;UBERON:0003082!2.01e-08!61;UBERON:0002385!2.56e-08!63;UBERON:0001015!2.56e-08!63;UBERON:0000383!2.56e-08!63;UBERON:0004733!4.39e-08!12;UBERON:0002028!4.39e-08!12;UBERON:0007277!4.39e-08!12;UBERON:0001950!9.77e-08!20;UBERON:0004111!1.84e-07!241;UBERON:0002619!2.14e-07!22;UBERON:0009773!2.44e-07!12;UBERON:0001231!2.44e-07!12;UBERON:0004810!2.44e-07!12;UBERON:0000064!2.67e-07!219;UBERON:0005256!5.26e-07!143;UBERON:0000486!5.56e-07!82;UBERON:0002680!6.32e-07!9;UBERON:0001895!6.32e-07!9;UBERON:0010092!6.32e-07!9;UBERON:0000477!6.57e-07!286;UBERON:0003076!7.36e-07!15;UBERON:0003057!7.36e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.02e-12;10!UBERON:0009773;1.02e-12;10!UBERON:0001231;1.02e-12;10!UBERON:0004810;1.02e-12;10!UBERON:0006555;5.02e-10;15!UBERON:0004819;5.02e-10;15!UBERON:0001285;5.02e-10;15!UBERON:0007684;5.02e-10;15!UBERON:0002113;1.58e-08;24!UBERON:0011143;1.58e-08;24!UBERON:0001778;4.32e-07;3!UBERON:0001775;4.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.15e-13,10;UBERON:0004211,3.29e-10,15;UBERON:0009773,3.29e-10,15;UBERON:0001231,3.29e-10,15;UBERON:0001285,3.29e-10,15;UBERON:0007684,3.29e-10,15;UBERON:0004208,3.29e-10,15;UBERON:0006555,1.86e-09,16;UBERON:0004819,1.86e-09,16;UBERON:0001016,1.40e-08,89;UBERON:0000483,4.37e-08,306;UBERON:0000119,6.97e-08,309;UBERON:0002113,8.14e-08,26;UBERON:0003918,8.14e-08,26;UBERON:0011143,8.14e-08,26;UBERON:0005095,8.14e-08,26;UBERON:0007687,8.14e-08,26;UBERON:0001778,1.85e-07,3;UBERON:0001775,1.85e-07,3;UBERON:0007503,3.55e-07,78 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,2.01697543935533,0.602694528023977,1.46062018077475,1.46379839637152,1.10808952269109,0.816002764977012,0.313454721478088,1.14494394852423,3.96935832711364,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668462741311041,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.289693037921647,0,0,1.79616152611729,3.1042115644759,1.93236528524877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,0,0.234321431833797,1.87296046098192,0.570471821544449,0.448346041655403,1.29177948508141,0.809364721840658,1.40450806702248,0.61246251376468,1.96534907698829,0.309977343527296,0,0.247266929278557,0,0,0.505008341862199,0.625592599359821,0.554128230968366,0,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0.265059536642971,0,0.621966330092223,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0.343135620597051,0,0,0,0,0,1.03993478527958,1.44331342025273,0.811512834825538,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77794104018073,0.381988425558278,0,1.71072446022705,0.308482478109971,0.600686115687835,1.42913216315289,0.784917590417525,0.43596006883328,0.51336800074665,0.387815147273333,0,0,0,0,2.05765899409714,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,6.86055485400651,2.60279707715243,5.41302168944387,2.34522771468088,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.434418072340414,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0.710246901252508,0.574890092096664,0,0,0,0,0,0,0,0,0.902399225814824,3.23464415838542,1.56869953835371,1.46139224653261,3.4832037534649,0,0,1.29549549661284,0,3.25135725052623,1.50506932156456,0.509752546090077,1.66215201785745,1.79099803777743,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,1.07834031980251,0.921022048356777,1.10269257987624,1.50388342815583,1.74020032697074,2.72725207731523,0.623224249527161,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,1.73986598415015,0.74129687641568,0,1.48863347743867,0.949138274156178,0,0.511795582622668,0,0,0,0.179872457583315,0.274537029736055,1.06031162111118,0.808729926293264,1.58510321173008,1.26377536871694,0,1.21856744815642,0,0,0,0,0,0,0,0,0.655894752046633,0.405820753925408,0.30982349809975,0.281695602532241,2.15117028306077,0.491245205065606,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97790605528978,0,0,0,0,0,0,0,0.422250816255987,0,0,3.77899121781414,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,7.98455192004777,0,0,0,0,0,0,5.8606373451049,0,3.29887490373255,0,0,1.52581736317083,1.21637185924347,0.295547618953547,0.87754158861589,0,0,0,4.10191401049204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0,0,1.18608451472249,1.72989514525104,1.98401704060365,0.404406797884062,0,0.234264445725339,0,0,0,0,0,5.20323694771833,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,0.379864775735272,0,3.44682927081595,0,0,0,0,2.57392496792947,0,0,0,0.135904206073614,0,0,2.02265412931063,0.600420288709789,0.273810757783986,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.687697182986169,2.49264202817511,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,1.19730191562487,0,1.5334921960688,0,0,0,1.0342636508924,1.05786081394152,1.71086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.751145584238999,0.573409195690071,0.332787154610557,0.310482014706917,0.138348634936231,0.249960815924213,0,0,0,3.74667924645505,4.6374729155464,0.298509605773748,0.233713309847224,0,0.189403005275089,0,0,0,0,0.310874401165561,0.443565449968902,0.63718706865481,0.899606224327209,1.24210365501008,0,0.53168342911599,0,0.150257608997218,1.14241563650639,1.62748293281865,0,0.429642228169954,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,7.43100403905046,0,0,0.829550616910385,0,0,0,0,0,0,4.79969750051832,0,0,0,0,0,0,5.75524670866433,25.5544803010136,0,10.0472867136653,0,0,0,0,0.318004350653419,0,5.60399523799829,0,0,0.256916900385838,0,0.478901577171454,0.615349092722265,6.80593579798639,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,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| |||
|short_description=p4@C6orf174 | |||
}} |
Revision as of 13:48, 22 January 2014
Short description: | p4@C6orf174 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C6orf174_5end |
Coexpression cluster: | C4555_neuroblastoma_occipital_parietal_carcinoid_brain_Neural_mesothelioma |
Association with transcript: | 0bp_to_ENST00000465909_5end |
EntrezGene: | C6orf174 |
HGNC: | 21494 |
UniProt: | E9PJP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 6.99e-15 | 59 |
neural cell | 2.56e-13 | 25 |
kidney cell | 2.93e-13 | 17 |
kidney epithelial cell | 2.93e-13 | 17 |
kidney tubule cell | 5.15e-13 | 10 |
nephron tubule epithelial cell | 5.15e-13 | 10 |
ectodermal cell | 4.04e-11 | 72 |
neuronal stem cell | 2.14e-10 | 8 |
epithelial cell of nephron | 3.29e-10 | 15 |
electrically responsive cell | 9.70e-09 | 61 |
electrically active cell | 9.70e-09 | 61 |
migratory neural crest cell | 5.10e-08 | 41 |
ciliated cell | 1.85e-07 | 3 |
ciliated epithelial cell | 1.85e-07 | 3 |
multi-ciliated epithelial cell | 1.85e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.85e-07 | 3 |
skeletal muscle satellite cell | 3.19e-07 | 3 |
embryonic cell | 6.37e-07 | 250 |
astrocyte of the cerebral cortex | 6.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.15e-13 | 10 |
nephron epithelium | 3.29e-10 | 15 |
renal tubule | 3.29e-10 | 15 |
nephron tubule | 3.29e-10 | 15 |
nephron | 3.29e-10 | 15 |
uriniferous tubule | 3.29e-10 | 15 |
nephrogenic mesenchyme | 3.29e-10 | 15 |
excretory tube | 1.86e-09 | 16 |
kidney epithelium | 1.86e-09 | 16 |
nervous system | 1.40e-08 | 89 |
epithelium | 4.37e-08 | 306 |
cell layer | 6.97e-08 | 309 |
kidney | 8.14e-08 | 26 |
kidney mesenchyme | 8.14e-08 | 26 |
upper urinary tract | 8.14e-08 | 26 |
kidney rudiment | 8.14e-08 | 26 |
kidney field | 8.14e-08 | 26 |
ciliary epithelium | 1.85e-07 | 3 |
ciliary body | 1.85e-07 | 3 |
epithelial vesicle | 3.55e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.09e-07 | 6 |