FFCP PHASE1:Hg19::chr6:125284359..125284375,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000519971_5end | |||
|coexpression_cluster_id=C383 | |||
|description=CAGE_peak_9_at_RNF217_5end | |||
|id=chr6:125284359..125284375,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002251;6.36e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,4.82e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.55e-10!365;UBERON:0000064!4.25e-09!219;UBERON:0000468!8.65e-09!659;UBERON:0004121!4.08e-08!169;UBERON:0000924!4.47e-08!173;UBERON:0006601!4.47e-08!173;UBERON:0000467!5.97e-08!625;UBERON:0000480!7.93e-08!626;UBERON:0004111!1.03e-07!241;UBERON:0000477!3.17e-07!286;UBERON:0001004!3.67e-07!72;UBERON:0000033!5.24e-07!123;UBERON:0004119!6.79e-07!169;UBERON:0000925!6.79e-07!169;UBERON:0006595!6.79e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;4.11e-11;6!UBERON:0003729;7.77e-11;13!UBERON:0003343;6.99e-10;4!UBERON:0004785;6.99e-10;4!UBERON:0002081;6.34e-09;2!UBERON:0000161;3.36e-07;19!UBERON:0000166;3.36e-07;19!UBERON:0000344;8.32e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,5.30e-11,13;UBERON:0003343,2.37e-10,4;UBERON:0004785,2.37e-10,4;UBERON:0002081,4.12e-09,2;UBERON:0010227,4.12e-09,2;UBERON:0000974,4.64e-07,10;UBERON:0000344,6.57e-07,20 | |||
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| |||
|short_description=p9@RNF217 | |||
}} |
Revision as of 13:43, 22 January 2014
Short description: | p9@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RNF217_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -19bp_to_ENST00000519971_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 4.82e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 5.30e-11 | 13 |
mucosa of oral region | 2.37e-10 | 4 |
respiratory system mucosa | 2.37e-10 | 4 |
cardiac atrium | 4.12e-09 | 2 |
future cardiac atrium | 4.12e-09 | 2 |
neck | 4.64e-07 | 10 |
mucosa | 6.57e-07 | 20 |