FFCP PHASE1:Mm9::chr19:34625154..34625192,+: Difference between revisions
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{{FFCP|EntrezGene=15958|HGNC=|UniProt=D3YZ80,Q64112,Q6GTM0|association_with_transcript=0bp_to_ENSMUST00000149829,NM_008332,uc008hgn.2_5end|description=CAGE_peak_1_at_Ifit2_5end|id=chr19:34625154..34625192,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.20e-09!88;UBERON:0000926!3.67e-09!193;UBERON:0004120!3.67e-09!193;UBERON:0006603!3.67e-09!193;UBERON:0004872!3.78e-07!33;UBERON:0000010!5.45e-07!11;UBERON:0002048!6.35e-07!14;UBERON:0000117!6.35e-07!14;UBERON:0000171!6.35e-07!14;UBERON:0000170!6.35e-07!14;UBERON:0005597!6.35e-07!14;UBERON:0000118!6.35e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.27e-09,87;UBERON:0004872,3.48e-07,33;UBERON:0000010,5.02e-07,11;UBERON:0002048,5.86e-07,14;UBERON:0000117,5.86e-07,14;UBERON:0000171,5.86e-07,14;UBERON:0000170,5.86e-07,14;UBERON:0005597,5.86e-07,14;UBERON:0000118,5.86e-07,14|phase1_expression=0.960893082628764,0,0,0,0,0.33575854382378,0.467225281191051,3.74457637980571,0.281577444303333,1.17032263160997,0.34243593645101,0.398860794976682,14.2096605842901,9.00430144915673,4.99664642723494,3.84703008040669,5.59649502502517,3.3123527362615,3.29074640653773,2.54633791078818,2.63634199468316,0.794327609607082,1.04479915655574,1.43993180514066,0.22940928106717,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,2.54012269383853,1.23012957516914,0,0.866554859253824,1.16364251750945,0.816677425049476,2.51118978442145,2.3440060335714,6.80580867165938,3.52938892818609,3.41522742479223,4.85510353031154,15.6112054289716,17.4368321697565,10.4621648732158,2.34717403304412,1.96222640742402,1.75748946187577,0.58328969722285,0.839918529752175,1.43752564364972,1.34226084846189,4.35217285206807,3.6970317905671,2.82985379639542,5.15760191889762,1.54701627683233,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0.599200221036809,1.92109152660777,1.14058573539325,0.270011876663381,1.05162480675691,0.285650984403804,0.883474163806454,1.10241719293459,0.670918297127655,0.919218786610021,1.10115880999389,2.17068474744819,1.84327839907492,0.131886287730194,0.548925861614458,0.52091337055676,0,1.12552522006336,2.44477196442896,1.17851434189467,1.85083185038834,1.3047961207771,3.18050011999373,10.8067330952703,5.50742528533188,2.58127163094416,0,0,0.649776417447669,0,1.82577746171277,5.62420064507591,4.67614808285164,2.47337702157238,1.83096445709685,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.94112595522402,9.58070169494535,2.9688427812965,1.73485326766136,1.82679286987285,2.99800146432876,4.6724018571313,4.70354828542819,3.39299796590124,0.741584903203122,7.95296463059514,0.884610551949874,5.01477234836968,4.41683036920787,4.363877278217,0,1.17112318804619,0.209446706813455,2.04365644166873,2.51611761462433,1.19980546198682,1.77898317902291,3.59497534571574,1.37250180845588,1.38219787324151,3.12883776346098,0.767146371990992,1.87009240103604,1.1356888414743,4.78645010096487,3.73220911830279,2.0217820674694,1.89397670297827,3.90361328888111,2.5289231487682,2.16074555766419,4.06903008156431,5.23881043465224,5.12454881139399,4.31027932974753,2.58703370739016,2.37124792226126,5.8622884852024,7.03804496655795,3.5071317188412,7.78532297831674,5.92028683087683,6.79081050146213,2.18937693500343,2.1066395619397,2.83082697826187,2.55747149456033,2.27838349789052,3.04883877975425,3.6012412292203,6.62885259638589,5.3126342571799,6.47921874126989,7.44108623201305,3.75582761959467,3.97002164048376,5.59503489705834,5.41752631461014,4.13450928683864,3.50879969820798,3.07370161407471,4.16039898157152,1.89260953707715,2.57261530948211,0,2.3800550999719,4.90562976231038,4.41249676534833,3.47942145569652,1.61346819698674,3.33567065767305,1.90225626112559,1.89811624617805,3.29397909448022,4.27269854960458,2.38747766449381,2.72949721966768,2.69645822596266,1.51296634912286,2.58883655230677,0.379335801906163,4.11294645395024,6.76246414038483,3.05476991767971,4.65485969202302,4.55882829287071,5.81776141543167,6.9376769550413,5.02395929092399,4.07210640941942,0.592905254174298,2.16898637430922,3.14494392181125,3.37293168577281,3.24576194221605,3.61765739628625,2.5462585178142,2.5892652370573,3.40483976227574,3.56929837144506,1.43768206527355,5.58211421502755,3.12037673114561,1.76805214562978,3.58794827043824,1.92977408545347,9.97667226899665,3.97931964718018,7.49638891633319,5.26209765903083,5.86725620721255,5.3602002381381,4.99891645860629,4.68320754858717,11.3497303756458,6.42247599981447,6.69710028361446,9.5040722535128,5.00786447411097,6.50920763616802,4.52373851817817,3.80733978673097,0.491764273019036,3.03530420935206,3.21101179975584,1.87538698547525,6.72133276044369,2.7771801992481,7.57219726599016,8.58965237452605,11.6328634775711,10.9925647058174,10.0259403337077,7.92614286208731,9.31064613852257,8.76767573733936,7.11518000303742,2.57057053137446,2.2710413633323,2.31485284767432,1.95464351224291,4.94910368917606,0,2.185025725394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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15958 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YZ80,uniprot:Q64112,uniprot:Q6GTM0 | |||
|association_with_transcript=0bp_to_ENSMUST00000149829,NM_008332,uc008hgn.2_5end | |||
|cluster_id=chr19:34625154..34625192,+ | |||
|description=CAGE_peak_1_at_Ifit2_5end | |||
|id=chr19:34625154..34625192,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.20e-09!88;UBERON:0000926!3.67e-09!193;UBERON:0004120!3.67e-09!193;UBERON:0006603!3.67e-09!193;UBERON:0004872!3.78e-07!33;UBERON:0000010!5.45e-07!11;UBERON:0002048!6.35e-07!14;UBERON:0000117!6.35e-07!14;UBERON:0000171!6.35e-07!14;UBERON:0000170!6.35e-07!14;UBERON:0005597!6.35e-07!14;UBERON:0000118!6.35e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.27e-09,87;UBERON:0004872,3.48e-07,33;UBERON:0000010,5.02e-07,11;UBERON:0002048,5.86e-07,14;UBERON:0000117,5.86e-07,14;UBERON:0000171,5.86e-07,14;UBERON:0000170,5.86e-07,14;UBERON:0005597,5.86e-07,14;UBERON:0000118,5.86e-07,14 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0.33575854382378,0.467225281191051,3.74457637980571,0.281577444303333,1.17032263160997,0.34243593645101,0.398860794976682,14.2096605842901,9.00430144915673,4.99664642723494,3.84703008040669,5.59649502502517,3.3123527362615,3.29074640653773,2.54633791078818,2.63634199468316,0.794327609607082,1.04479915655574,1.43993180514066,0.22940928106717,0,0,0,0.380046838912748,0.756090389279792,0.221730510655305,2.54012269383853,1.23012957516914,0,0.866554859253824,1.16364251750945,0.816677425049476,2.51118978442145,2.3440060335714,6.80580867165938,3.52938892818609,3.41522742479223,4.85510353031154,15.6112054289716,17.4368321697565,10.4621648732158,2.34717403304412,1.96222640742402,1.75748946187577,0.58328969722285,0.839918529752175,1.43752564364972,1.34226084846189,4.35217285206807,3.6970317905671,2.82985379639542,5.15760191889762,1.54701627683233,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0.599200221036809,1.92109152660777,1.14058573539325,0.270011876663381,1.05162480675691,0.285650984403804,0.883474163806454,1.10241719293459,0.670918297127655,0.919218786610021,1.10115880999389,2.17068474744819,1.84327839907492,0.131886287730194,0.548925861614458,0.52091337055676,0,1.12552522006336,2.44477196442896,1.17851434189467,1.85083185038834,1.3047961207771,3.18050011999373,10.8067330952703,5.50742528533188,2.58127163094416,0,0,0.649776417447669,0,1.82577746171277,5.62420064507591,4.67614808285164,2.47337702157238,1.83096445709685,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.94112595522402,9.58070169494535,2.9688427812965,1.73485326766136,1.82679286987285,2.99800146432876,4.6724018571313,4.70354828542819,3.39299796590124,0.741584903203122,7.95296463059514,0.884610551949874,5.01477234836968,4.41683036920787,4.363877278217,0,1.17112318804619,0.209446706813455,2.04365644166873,2.51611761462433,1.19980546198682,1.77898317902291,3.59497534571574,1.37250180845588,1.38219787324151,3.12883776346098,0.767146371990992,1.87009240103604,1.1356888414743,4.78645010096487,3.73220911830279,2.0217820674694,1.89397670297827,3.90361328888111,2.5289231487682,2.16074555766419,4.06903008156431,5.23881043465224,5.12454881139399,4.31027932974753,2.58703370739016,2.37124792226126,5.8622884852024,7.03804496655795,3.5071317188412,7.78532297831674,5.92028683087683,6.79081050146213,2.18937693500343,2.1066395619397,2.83082697826187,2.55747149456033,2.27838349789052,3.04883877975425,3.6012412292203,6.62885259638589,5.3126342571799,6.47921874126989,7.44108623201305,3.75582761959467,3.97002164048376,5.59503489705834,5.41752631461014,4.13450928683864,3.50879969820798,3.07370161407471,4.16039898157152,1.89260953707715,2.57261530948211,0,2.3800550999719,4.90562976231038,4.41249676534833,3.47942145569652,1.61346819698674,3.33567065767305,1.90225626112559,1.89811624617805,3.29397909448022,4.27269854960458,2.38747766449381,2.72949721966768,2.69645822596266,1.51296634912286,2.58883655230677,0.379335801906163,4.11294645395024,6.76246414038483,3.05476991767971,4.65485969202302,4.55882829287071,5.81776141543167,6.9376769550413,5.02395929092399,4.07210640941942,0.592905254174298,2.16898637430922,3.14494392181125,3.37293168577281,3.24576194221605,3.61765739628625,2.5462585178142,2.5892652370573,3.40483976227574,3.56929837144506,1.43768206527355,5.58211421502755,3.12037673114561,1.76805214562978,3.58794827043824,1.92977408545347,9.97667226899665,3.97931964718018,7.49638891633319,5.26209765903083,5.86725620721255,5.3602002381381,4.99891645860629,4.68320754858717,11.3497303756458,6.42247599981447,6.69710028361446,9.5040722535128,5.00786447411097,6.50920763616802,4.52373851817817,3.80733978673097,0.491764273019036,3.03530420935206,3.21101179975584,1.87538698547525,6.72133276044369,2.7771801992481,7.57219726599016,8.58965237452605,11.6328634775711,10.9925647058174,10.0259403337077,7.92614286208731,9.31064613852257,8.76767573733936,7.11518000303742,2.57057053137446,2.2710413633323,2.31485284767432,1.95464351224291,4.94910368917606,0,2.18502572539483,1.209294227859,1.32023555829129,0.590603785761546,2.15204603560749,4.9101375701962,4.72593848320757,4.63446591900138,2.52829406348653,0,2.06271086496374,1.36175842301515,2.34079422240703,1.16422815404479,1.71469628025274,1.77340233642274,1.60531935841864,2.30368628842969,0,1.87737366450968,2.1183207086382,1.54369878638473,3.13283880588812,7.42736362801165,4.40284351975538,2.86493625607528,1.64140899745061,2.62332752966866,3.8939313422207,3.75915937755276,2.27025554759545,7.03739204004904,9.98352822124862,7.65487675237741,5.0331198105435,2.71965487990169,3.91864066506242,2.62579950228405,0,4.4287039101359,3.65975040828328,3.34816556547584,4.18176592028937,2.18362563746178,3.10187996685088,4.79390043206948,2.35580347785627,1.55537967950151,1.86401793926078,0,1.34564891439581,1.48912641411388,2.52786544847262,1.80823752868824,3.37912250981556,2.93393096614385,2.73429208172295,0.734015410979976,0,0.864090018773596,9.79634473947353,1.82452693761148,3.492172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| |||
|short_description=p1@Ifit2 | |||
}} |
Revision as of 23:04, 3 August 2015
Short description: | p1@Ifit2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ifit2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000149829, NM_008332, uc008hgn.2_5end |
EntrezGene: | 15958 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.27e-09 | 87 |
splanchnic layer of lateral plate mesoderm | 3.48e-07 | 33 |
peripheral nervous system | 5.02e-07 | 11 |
lung | 5.86e-07 | 14 |
respiratory tube | 5.86e-07 | 14 |
respiration organ | 5.86e-07 | 14 |
pair of lungs | 5.86e-07 | 14 |
lung primordium | 5.86e-07 | 14 |
lung bud | 5.86e-07 | 14 |