FFCP PHASE1:Hg19::chr6:105850911..105850932,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9358 | |||
|TSSclassifier=strong | |||
|UniProt=P48147 | |||
|association_with_transcript=26bp_to_ENST00000369110_5end | |||
|description=CAGE_peak_2_at_PREP_5end | |||
|id=chr6:105850911..105850932,- | |||
|ontology_enrichment_celltype=CL:0002194!5.23e-10!63;CL:0000576!5.23e-10!63;CL:0000040!5.23e-10!63;CL:0000559!5.23e-10!63;CL:0000223!5.68e-10!59;CL:0002009!9.01e-10!65;CL:0002057!2.71e-09!42;CL:0000763!3.50e-09!112;CL:0000049!3.50e-09!112;CL:0002076!7.34e-09!43;CL:0000860!2.37e-08!45;CL:0000557!1.53e-07!71;CL:0002368!2.08e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.27e-08;33!CL:0002057;5.27e-08;33!CL:0002368;2.28e-07;13!CL:0000473;2.86e-07;39!CL:0000234;2.86e-07;39!CL:0002076;3.42e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.96e-10,59;CL:0000576,1.96e-10,59;CL:0000040,1.96e-10,59;CL:0000559,1.96e-10,59;CL:0002009,3.61e-10,61;CL:0000223,8.21e-10,58;CL:0000473,1.61e-09,48;CL:0000234,1.61e-09,48;CL:0000763,2.34e-09,108;CL:0000049,2.34e-09,108;CL:0000860,2.71e-09,42;CL:0002057,2.71e-09,42;CL:0002076,1.05e-08,42;CL:0000557,8.65e-08,67;CL:0002368,2.08e-07,13;CL:0000839,7.89e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.89e-07;42 | |||
|ontology_enrichment_disease=DOID:8692!1.15e-07!31;DOID:1240!2.88e-07!39;DOID:2531!8.52e-07!51;DOID:0060083!8.52e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.11e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.15e-07,31;DOID:1240,2.88e-07,39;DOID:2531,8.52e-07,51;DOID:0060083,8.52e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002365!4.23e-07!31;UBERON:0002330!4.23e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;6.85e-07;31!UBERON:0002330;6.85e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.23e-07,31;UBERON:0002330,4.23e-07,31 | |||
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| |||
|short_description=p2@PREP | |||
}} |
Revision as of 13:10, 22 January 2014
Short description: | p2@PREP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PREP_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000369110_5end |
EntrezGene: | PREP |
HGNC: | 9358 |
UniProt: | P48147 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.96e-10 | 59 |
monocyte | 1.96e-10 | 59 |
monoblast | 1.96e-10 | 59 |
promonocyte | 1.96e-10 | 59 |
macrophage dendritic cell progenitor | 3.61e-10 | 61 |
endodermal cell | 8.21e-10 | 58 |
defensive cell | 1.61e-09 | 48 |
phagocyte | 1.61e-09 | 48 |
myeloid cell | 2.34e-09 | 108 |
common myeloid progenitor | 2.34e-09 | 108 |
classical monocyte | 2.71e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.71e-09 | 42 |
endo-epithelial cell | 1.05e-08 | 42 |
granulocyte monocyte progenitor cell | 8.65e-08 | 67 |
respiratory epithelial cell | 2.08e-07 | 13 |
myeloid lineage restricted progenitor cell | 7.89e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 4.23e-07 | 31 |
exocrine system | 4.23e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.15e-07 | 31 |
leukemia | 2.88e-07 | 39 |
hematologic cancer | 8.52e-07 | 51 |
immune system cancer | 8.52e-07 | 51 |