FFCP PHASE1:Hg19::chr6:10413124..10413132,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |||
|TSSclassifier=strong | |||
|UniProt=C9J6N8 | |||
|association_with_transcript=-12bp_to_ENST00000465858_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_31_at_TFAP2A_5end | |||
|id=chr6:10413124..10413132,- | |||
|ontology_enrichment_celltype=CL:0002541!1.35e-09!3;CL:0001014!2.09e-07!2;CL:0001016!2.09e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0001014;7.05e-18;2!CL:0001016;7.05e-18;2!CL:0002623;2.89e-12;3!CL:0000453;5.92e-08;5!CL:0000312;7.01e-08;5!CL:0000622;7.01e-08;5!CL:0000840;7.80e-07;5!CL:0000240;8.97e-07;6!CL:0000311;8.97e-07;6!CL:0000079;8.97e-07;6!CL:0000237;8.97e-07;6!CL:0000154;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.48e-18,2;CL:0001016,6.48e-18,2;CL:0002623,2.59e-12,3;CL:0000453,5.73e-08,5;CL:0000622,6.55e-08,5;CL:0000312,7.49e-08,5;CL:0000840,7.58e-07,5;CL:0001029,7.58e-07,5;CL:0000154,8.48e-07,6;CL:0000240,9.49e-07,6;CL:0000311,9.49e-07,6;CL:0000079,9.49e-07,6;CL:0000237,9.49e-07,6;CL:0000036,9.49e-07,6;CL:0000357,9.49e-07,6;CL:0000114,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1!CL:0000357;8.97e-07;6!CL:0000114;8.97e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!5.44e-20!14;DOID:305!1.46e-08!106;DOID:3451!3.60e-07!2;DOID:4159!3.60e-07!2;DOID:0060122!3.60e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.35e-09!3;UBERON:0000920!1.35e-09!3;UBERON:0000161!3.21e-09!35;UBERON:0000344!3.22e-08!12;UBERON:0003343!1.77e-07!4;UBERON:0004785!1.77e-07!4;UBERON:0003124!3.66e-07!7;UBERON:0002394!5.25e-07!4;UBERON:0003928!5.25e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.12e-09;4!UBERON:0001044;8.97e-07;6!UBERON:0003293;8.97e-07;6!UBERON:0003294;8.97e-07;6!UBERON:0010047;8.97e-07;6!UBERON:0003408;8.97e-07;6!UBERON:0000167;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0001044,8.48e-07,6;UBERON:0003293,8.48e-07,6;UBERON:0003294,8.48e-07,6;UBERON:0010047,8.48e-07,6;UBERON:0000167,8.48e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.524759999977174,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0.46112780877612,0,0,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.783939179315021,0.435296032902013,0,0,0,0,0,0.484945082442097,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,2.32140586367385,0,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.366857197043358,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12046354122208,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.336760265072938,0.215166616178029,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p31@TFAP2A | |||
}} |
Revision as of 09:55, 22 January 2014
Short description: | p31@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_TFAP2A_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -12bp_to_ENST00000465858_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | C9J6N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.48e-18 | 2 |
immature CD1a-positive Langerhans cell | 6.48e-18 | 2 |
acinar cell of salivary gland | 2.59e-12 | 3 |
Langerhans cell | 5.73e-08 | 5 |
acinar cell | 6.55e-08 | 5 |
keratinocyte | 7.49e-08 | 5 |
immature conventional dendritic cell | 7.58e-07 | 5 |
common dendritic progenitor | 7.58e-07 | 5 |
protein secreting cell | 8.48e-07 | 6 |
stratified squamous epithelial cell | 9.49e-07 | 6 |
keratin accumulating cell | 9.49e-07 | 6 |
stratified epithelial cell | 9.49e-07 | 6 |
keratinizing barrier epithelial cell | 9.49e-07 | 6 |
epithelial fate stem cell | 9.49e-07 | 6 |
stratified epithelial stem cell | 9.49e-07 | 6 |
surface ectodermal cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
saliva-secreting gland | 8.48e-07 | 6 |
gland of oral region | 8.48e-07 | 6 |
gland of foregut | 8.48e-07 | 6 |
oral gland | 8.48e-07 | 6 |
oral cavity | 8.48e-07 | 6 |