FFCP PHASE1:Hg19::chr5:92917025..92917042,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000504474,NR_021490,uc003kkf.2,uc003kkg.2,uc003kkh.2,uc003kki.2,uc010jbb.1_5end | |||
|description=CAGE_peak_5_at_FLJ42709_5end | |||
|id=chr5:92917025..92917042,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;5.95e-07;3!CL:0000067;5.95e-07;3!CL:0005012;5.95e-07;3!CL:0002304;5.95e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.89e-07,3;CL:0000067,2.89e-07,3;CL:0005012,2.89e-07,3;CL:0002304,2.89e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.94e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.09e-22!86;UBERON:0000073!3.00e-21!94;UBERON:0001016!3.00e-21!94;UBERON:0001017!2.08e-20!82;UBERON:0003075!3.57e-20!86;UBERON:0007284!3.57e-20!86;UBERON:0002346!4.17e-20!90;UBERON:0002616!5.35e-20!59;UBERON:0000475!6.16e-20!365;UBERON:0000477!1.73e-19!286;UBERON:0001049!4.54e-19!57;UBERON:0005068!4.54e-19!57;UBERON:0006241!4.54e-19!57;UBERON:0007135!4.54e-19!57;UBERON:0000955!1.04e-18!69;UBERON:0006238!1.04e-18!69;UBERON:0000481!1.42e-18!347;UBERON:0000033!3.09e-18!123;UBERON:0000119!5.06e-17!312;UBERON:0000153!7.21e-17!129;UBERON:0007811!7.21e-17!129;UBERON:0000483!4.22e-16!309;UBERON:0000924!2.22e-15!173;UBERON:0006601!2.22e-15!173;UBERON:0004121!3.49e-15!169;UBERON:0003056!2.04e-14!61;UBERON:0004111!6.90e-14!241;UBERON:0002020!9.44e-14!34;UBERON:0003528!9.44e-14!34;UBERON:0001893!1.19e-13!34;UBERON:0003080!1.56e-13!42;UBERON:0001869!5.10e-13!32;UBERON:0002791!5.21e-13!33;UBERON:0000956!5.40e-13!25;UBERON:0000203!5.40e-13!25;UBERON:0002780!5.81e-13!41;UBERON:0001890!5.81e-13!41;UBERON:0006240!5.81e-13!41;UBERON:0000025!6.91e-13!194;UBERON:0001950!1.15e-12!20;UBERON:0002619!2.51e-12!22;UBERON:0000064!5.13e-12!219;UBERON:0000468!2.64e-10!659;UBERON:0000062!1.85e-09!511;UBERON:0000467!2.15e-09!625;UBERON:0000480!2.99e-09!626;UBERON:0002050!3.30e-09!605;UBERON:0005423!3.30e-09!605;UBERON:0000922!3.38e-09!612;UBERON:0000923!7.06e-09!604;UBERON:0005291!7.06e-09!604;UBERON:0006598!7.06e-09!604;UBERON:0002532!7.06e-09!604;UBERON:0007023!9.42e-08!115;UBERON:0003076!7.21e-07!15;UBERON:0003057!7.21e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.36e-30;22!UBERON:0001950;6.77e-30;20!UBERON:0000956;8.40e-26;25!UBERON:0000203;8.40e-26;25!UBERON:0001869;6.93e-21;32!UBERON:0001893;3.41e-19;34!UBERON:0003528;8.39e-19;34!UBERON:0002020;8.39e-19;34!UBERON:0002791;1.39e-18;32!UBERON:0002780;5.74e-14;41!UBERON:0001890;5.74e-14;41!UBERON:0000073;1.05e-11;53!UBERON:0002616;1.05e-11;53!UBERON:0001872;2.81e-11;5!UBERON:0000955;3.17e-11;68!UBERON:0001017;4.88e-11;75!UBERON:0002021;8.61e-11;5!UBERON:0006876;1.30e-10;11!UBERON:0001016;1.40e-10;83!UBERON:0000200;7.52e-09;6!UBERON:0000488;1.33e-08;4!UBERON:0007625;3.45e-08;11!UBERON:0001871;6.98e-08;6!UBERON:0001778;5.95e-07;3!UBERON:0001775;5.95e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.17e-30,22;UBERON:0001950,1.80e-30,20;UBERON:0000956,1.92e-26,25;UBERON:0000203,1.92e-26,25;UBERON:0001017,2.13e-26,81;UBERON:0003075,2.44e-26,82;UBERON:0007284,2.44e-26,82;UBERON:0002346,1.30e-24,86;UBERON:0001016,3.42e-24,89;UBERON:0001869,3.71e-24,32;UBERON:0000955,5.58e-24,68;UBERON:0006238,5.58e-24,68;UBERON:0003056,7.16e-23,61;UBERON:0001893,2.06e-22,34;UBERON:0001049,3.57e-22,56;UBERON:0005068,3.57e-22,56;UBERON:0006241,3.57e-22,56;UBERON:0007135,3.57e-22,56;UBERON:0003528,3.88e-22,34;UBERON:0002020,3.88e-22,34;UBERON:0002791,1.04e-21,32;UBERON:0000073,4.70e-20,53;UBERON:0002616,4.70e-20,53;UBERON:0010371,6.79e-20,104;UBERON:0002780,2.12e-19,41;UBERON:0001890,2.12e-19,41;UBERON:0003080,2.12e-19,41;UBERON:0006240,2.12e-19,41;UBERON:0004121,2.32e-19,171;UBERON:0000924,2.32e-19,171;UBERON:0006601,2.32e-19,171;UBERON:0011216,1.07e-16,223;UBERON:0010314,1.62e-15,132;UBERON:0001872,1.29e-11,5;UBERON:0006876,2.06e-10,11;UBERON:0002021,2.12e-10,5;UBERON:0000200,2.26e-09,6;UBERON:0000488,6.74e-09,4;UBERON:0000119,8.00e-09,309;UBERON:0000483,1.64e-08,306;UBERON:0007625,2.94e-08,11;UBERON:0001871,3.23e-08,6;UBERON:0007023,1.12e-07,114;UBERON:0001778,2.89e-07,3;UBERON:0001775,2.89e-07,3 | |||
|phase1_expression=0.908391896352783,0.642301571672949,1.55049844505568,0,0.446961094427288,2.61701557230111,0,0,0.522371256399677,0.491467873003018,0,0,0,0.990130823680373,0.994192127183747,0,0,0,0,0.738726348460727,0.612002073732759,0.626909442956176,0.572471974262113,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.511450247374121,0,0,0,2.3858578411533,0,1.32348744029695,1.99556457716308,2.63504357079378,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0.258416759169329,0,0.66944122552934,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0,0.709336764396714,0,0,0.98667019366864,0.933633106199299,0.134710672069688,0.326923806226917,1.21085942115945,1.15235184896,0.937285727335186,0.312160076830321,0,0.597794722207204,0.352303495931295,0.161872944368132,0,0.816616685019573,0.368502951935304,1.23990937410919,1.18800285728205,0.494533858557114,0,0.718618141816238,0.841680569770331,0,0.554128230968366,0.438977620880838,0,0.45071417671979,0.680593098960126,0.179389635688862,0.427114777637135,0.423863802319124,0,0.103052529238439,0.257640540045629,0.37223371266318,0.337552664482532,0,0,0.368199594569197,1.61646056818812,0,0.201504196455281,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0.464367928031979,2.88751792667834,0.118306800039844,0,0,0.110293972732394,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,1.3725424823882,0,0,0,0,0,0,0,0.34779121492523,1.05667824812239,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,1.30788020649984,0.4400297149257,0,0,0,1.06375246633948,3.12022310734098,0.257207374262142,0,0,1.28680194292333,0,0,0,1.77695974371273,0,0.602878754119172,0,0.699810938274399,0,0,0,0,0,0,1.01346914667305,0.821905290201534,0.716243852959582,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.502548796003046,0,0,0,0,0.858840442033979,1.00034104211935,1.62759014219841,0.415941723061614,0.356857977594324,0,0.585707074963566,0.300946099727719,4.5481500811197,2.0694614258501,0,0,1.04260337361699,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.768834895534206,0,0.321707842287215,1.48418066444991,0,0.710246901252508,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0.459257792658427,0.546273504020151,5.24497659837697,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,1.79515087581472,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.426133137080504,0.267096106940212,0.165284915360978,0,0.127612712494584,0,0,0,0,0.924100740528266,1.59691809095107,0,0.55597265731176,0.143124886741991,1.116475108079,0.949138274156178,1.33441135746677,0,3.42351190427136,0,0.78494864019923,0.539617372749944,1.92175920815238,1.53156123049392,0,0,0,0,0.243713489631284,0,0.682499557039929,1.55545975149084,1.13008116620243,0,0.66343897524122,0,1.15755106853338,0.655894752046633,0.608731130888112,0,0.845086807596724,0.430234056612155,0.491245205065606,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,2.06312886974173,0,0.852408440419239,0,0,0,0,1.96937182974718,0.222617410045812,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0,1.55519793830904,0.988551862620595,0.179021174675609,0,0.493217028184668,0,0,0,1.76259386507517,3.99227596002388,0,0.174919999992391,1.44999915086959,0.1137934482855,0.508507300585533,0,0,0.291604613383254,0,0,0.844175070377856,3.05163472634166,1.21637185924347,2.06883333267483,1.53569778007781,0.21787692703798,0.139423744278603,0.384751292518985,0.227884111694002,0,0,0,0,0.549585560411174,0,0,0,0.498635045700469,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0.123563938946503,0.104421949505455,0.471807930864739,1.60515529459758,1.1713222286267,0,0,0.728341138602278,0.394584402849391,0,4.89716418608784,0.505492637027904,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,1.8027707491708,0,0,0.0870592065804026,0.698906672968121,0.687944129886466,0.19351266257817,0.292357268344742,0.328461828212837,0.484945082442097,0.264768380074501,1.12990370390266,0.137041924646751,0,3.10222900183806,0,0.0801588202515337,0,0,0,0.229073192331831,0.171594997861965,0,0,0,0,0.104602846312333,1.32597682927218,0,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,1.18112977817699,0,0,1.77064427945048,0,0,0,0,0,2.30848315300494,0,0.157611414598396,1.04909176269996,0.844802692155252,0.35857467866569,0,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,1.13312091520126,0,0,0.904980694530854,1.05786081394152,0.171086837884329,0,0.320362237703084,0.943225830597996,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0,0,0.886068179966986,3.05065662254908,1.8778639605975,0,0.221858103073705,0.745156835296601,0,0.499921631848426,0,0,0.470531639396343,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0.686520205190771,0.604923695052956,0.310874401165561,0,0.955780602982214,0.449803112163605,0.465788870628778,1.24411862352257,0.797525143673985,0.521745061811734,0.450772826991655,0.761610424337591,0.406870733204662,0,0.644463342254931,0.464033759878494,0,1.20008329398946,0.343395705182793,0.673498977531838,1.26184898228651,0,0.428883182749851,0,0.906823702049089,0.231522474323834,0.244736704506468,0.179088841081487,0,0.219284049578707,0.176689145945881,0,0.506827321959218,0,0,0,2.35039341457942,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0.850299680406731,0,0.558644917973244,0.636008701306837,0,0.80057074828547,1.05802783107205,1.8374728641192,1.15612605173627,1.41696576325585,1.11743701340006,2.05116364240755,5.29350562065608,1.24483054435592,1.77623210195036,1.42769420259154,0,0.11796972334774,0.183428598521679,0.462102664601353,0,0,0,0.601682626794058,0,0,0,0.982631505060581,0.147856086217045,1.75597720007826,5.46754669029693,2.06686796501184,1.71222687523548,3.82882366312754,0,0,0.175871244359621,0,0,0.336283722218824,0,0,0.177404740325278,0,0.342976018874837,0.271878931907327,1.64431933907123,0,0.556157009460346,0.627944742804112,0.314231179832004,0,5.47895232305697,0,0,0.714765441766563,0,1.74362138052188,0.173858272302579,0,0,0,0.691259661814092,0,0.236664001461131,0.426067023795788,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0,1.42704108933082,0,0,0.150962843566674,0,0.655678681511872,0,1.22574160876953,0.471353094203252,1.57046773691956,0.891139200981258,2.113278637917,0.339854229375634,0.187967835959707,0.0644578879735772,0,0,0,0.401206833445841,2.19100916473955,0.458729283404541,0.716697915757256,0.157771562193185,1.69978725477287,7.41796173578642,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.724030971033267,0.426467963801962,0,0,0.0620747142958579,0.672791175483681,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,0.99798106963804,0.0814032686109745,0.106727345877715,1.9307228228694,0.359300808426348,0,0.244482888365733,1.62758471326295,0,0.402547587182052,0 | |||
|short_description=p5@FLJ42709 | |||
}} |
Revision as of 06:29, 22 January 2014
Short description: | p5@FLJ42709 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FLJ42709_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000504474, NR_021490, uc003kkf.2, uc003kkg.2, uc003kkh.2, uc003kki.2, uc010jbb.1_5end |
EntrezGene: | FLJ42709 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.89e-07 | 3 |
ciliated epithelial cell | 2.89e-07 | 3 |
multi-ciliated epithelial cell | 2.89e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.89e-07 | 3 |