FFCP PHASE1:Hg19::chr5:90679281..90679304,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr5:90679281..90679304,+ | |||
|id=chr5:90679281..90679304,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.31e-30!140;CL:0002031!1.16e-24!124;CL:0000988!5.00e-24!182;CL:0000037!8.66e-24!172;CL:0000566!8.66e-24!172;CL:0002032!1.70e-23!165;CL:0000837!1.70e-23!165;CL:0002087!3.58e-22!119;CL:0000766!1.19e-20!76;CL:0000860!4.24e-19!45;CL:0002057!3.03e-18!42;CL:0000839!9.56e-17!70;CL:0000557!7.54e-16!71;CL:0000763!1.34e-15!112;CL:0000049!1.34e-15!112;CL:0002009!2.67e-14!65;CL:0002194!1.20e-13!63;CL:0000576!1.20e-13!63;CL:0000040!1.20e-13!63;CL:0000559!1.20e-13!63;CL:0000838!7.86e-08!52;CL:0000542!9.65e-08!53;CL:0000051!9.65e-08!53;CL:0000134!1.31e-07!358;CL:0002320!2.68e-07!365;CL:0000094!3.72e-07!8;CL:0000219!7.59e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.91e-24;33!CL:0002057;4.91e-24;33!CL:0000576;1.16e-18;48!CL:0000766;6.49e-18;69!CL:0000473;6.15e-17;39!CL:0000234;6.15e-17;39!CL:0000094;2.57e-16;8!CL:0000738;1.38e-11;136!CL:0000625;1.47e-11;11!CL:0000081;2.49e-11;11!CL:0002087;1.19e-10;104!CL:0000791;1.12e-09;18!CL:0000789;1.12e-09;18!CL:0002419;1.12e-09;18!CL:0000763;2.72e-08;100!CL:0002393;4.32e-08;6!CL:0002397;4.32e-08;6!CL:0000084;1.69e-07;25!CL:0000775;2.03e-07;3!CL:0000767;6.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.73e-45,136;CL:0000766,2.09e-37,72;CL:0000037,3.94e-35,168;CL:0002031,1.27e-34,120;CL:0000988,1.92e-33,177;CL:0002032,2.36e-33,161;CL:0000837,2.36e-33,161;CL:0002087,2.40e-32,115;CL:0000860,5.05e-31,42;CL:0002057,5.05e-31,42;CL:0000839,3.67e-28,66;CL:0000473,5.92e-26,48;CL:0000234,5.92e-26,48;CL:0000557,2.33e-24,67;CL:0000763,3.07e-24,108;CL:0000049,3.07e-24,108;CL:0002194,6.66e-22,59;CL:0000576,6.66e-22,59;CL:0000040,6.66e-22,59;CL:0000559,6.66e-22,59;CL:0002009,6.98e-21,61;CL:0000094,2.53e-16,8;CL:0000625,3.74e-12,11;CL:0000081,2.46e-11,11;CL:0000791,3.65e-10,18;CL:0000789,3.65e-10,18;CL:0002420,3.65e-10,18;CL:0002419,3.65e-10,18;CL:0000790,3.65e-10,18;CL:0000134,6.54e-10,354;CL:0002320,7.86e-10,361;CL:0000838,7.81e-09,52;CL:0000542,1.44e-08,53;CL:0000051,1.44e-08,53;CL:0000084,9.36e-08,25;CL:0000827,9.36e-08,25;CL:0000034,1.11e-07,441;CL:0000048,1.51e-07,427;CL:0000219,1.76e-07,386;CL:0000775,2.06e-07,3;CL:0000723,3.46e-07,433;CL:0000767,6.96e-07,3;CL:0000623,9.99e-07,3;CL:0000825,9.99e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-23;42!CL:0000790;1.12e-09;18!CL:0000049;4.13e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.43e-19!102;UBERON:0003061!1.43e-19!102;UBERON:0002193!7.11e-19!112;UBERON:0002371!4.75e-14!80;UBERON:0001474!4.18e-13!86;UBERON:0004765!2.51e-11!101;UBERON:0001434!2.51e-11!101;UBERON:0002405!1.05e-10!115;UBERON:0003081!5.15e-07!216;UBERON:0002384!9.70e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-13;15!UBERON:0000179;1.27e-13;15!UBERON:0000463;1.27e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.25e-31,98;UBERON:0003061,5.25e-31,98;UBERON:0002193,3.85e-28,108;UBERON:0002371,3.08e-20,76;UBERON:0002405,4.32e-18,93;UBERON:0001474,5.26e-18,82;UBERON:0004765,1.65e-15,90;UBERON:0000178,1.07e-13,15;UBERON:0000179,1.07e-13,15;UBERON:0000463,1.07e-13,15;UBERON:0001434,5.63e-13,100;UBERON:0003081,2.23e-10,203;UBERON:0002384,4.53e-09,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.982935746006035,0,0.436882744260345,0.791300934685361,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.572471974262113,0.410623275218653,0.251085279189606,0.305653622991805,0.328402357799783,0.157421562627358,5.11373559903575,2.30297638858328,4.64448369948228,0,0,0,0.154934401160603,0.426507697462265,0,11.6339035791694,11.8321224007384,8.68043482863407,0.671746422719773,1.29557466407592,1.28787783817093,2.4717700592526,2.64513160582167,1.94067248950253,1.85943229524548,1.23350366406548,0.619412741790207,0.28769239232215,1.2808035326455,0.236482229888585,1.03423704220986,1.29096936716765,1.35426486594342,3.38836211176688,2.18324920046277,2.69668181334102,0.612167784741805,1.28371610830437,0.639337125799041,1.9791078011203,0.997318288108159,2.13112375266347,5.22376629531451,3.40431134814684,2.4912889959823,1.50749199154046,0,1.52032191293582,4.23779651843358,4.05105399586321,3.48108626184973,0,1.06302149982522,1.46761051855863,0.898629049171961,1.50176892841506,1.28580469357664,0.855038231223746,0.59675003159727,0.91332076882317,0,3.82297027883492,1.77901850772711,0.426730222566507,1.20118796110804,2.87376219977242,0.661044872784862,2.86216126360609,0,0.587237189370939,0,3.96513985737078,3.36305137788922,0.263384084775077,0.590129310341499,0.786021525498329,3.28962398399215,1.5046784585161,0.977766799900771,1.4203434172042,0,0.557052284425868,0,1.10766947291811,2.16643091012012,1.0247305578054,0.780356085359269,0.986627427622057,1.10540007114339,0.289803085735052,1.33457906845854,1.07016331235885,3.1360657141493,0.453237370790265,1.53288197440768,0.68725489096526,0.506039384039006,1.91139248594458,1.30216690771284,1.90090408889675,1.6563263098555,2.17577238962511,0,0.947109008176067,1.64225599384209,5.24177532384304,2.67440195783507,2.31719046212478,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0.472674085820339,0.221729397462564,0.087834785693126,0.785874452986276,0.728590576585084,0,0,0.174129737299267,0,0.476981248610684,0,0.74291500265913,0.198762407366705,0,0.694281003215189,0,0,0,0.417989933073621,0,0.71153252537342,1.33888245105868,0.402829317109147,0,0,0.367663080345869,0,0.17859945656816,0.898117490504679,0.337834441449967,0,0.949265659568129,0.183201743930407,3.9534125230819,15.511210565933,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0,1.24484414159907,0.404132016209064,0.163461903113459,0.605429710579726,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0.23486899728753,0,0.280901613404497,0.408308342509787,0.491337269247072,0.103325781175765,0,1.23633464639278,0.910161361938026,0.718618141816238,0.505008341862199,0.375355559615893,0,0.438977620880838,0.30648779579902,0,0.340296549480063,0.179389635688862,0.427114777637135,0,0.600182192168805,0.206105058476878,0,0,0,0.194874010322397,0,0.736399189138395,0.646584227275248,0,0.302256294682921,0.339121184620975,0,0,0.286804595389004,0.121973706129595,0,0,0.414644220061482,0,0.36497735907583,0,0.643240938192885,0,0,0,0.946454400318751,0.337169380156203,0.241011029883482,0.772057809126758,0.871517776369625,0.474541238222193,0.539325232640658,0,1.15424147083917,0.738155454624648,0,0,1.47008711385542,1.26755034821831,0,0,0,0.614942192715568,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,3.1608175918371,0.858486162094873,0.492434012174795,0.936017060556951,0.445893486866185,0,0,0.141775097242386,0,0,0.383382679165211,1.47798971368783,0.528290604079356,2.07328115540772,3.17063897517315,1.76739406796932,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.358121926479791,0.112085143993527,2.75843064282698,3.23441362289276,3.46526197955321,0,1.30139853857622,0,0.167516265334349,0,22.4702107184155,17.9496875522415,10.3603878359009,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.60818530127658,0.587403472388222,1.02943027143257,1.24060815673732,4.09856981555372,2.02782359826544,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0.116210378459959,0.725156697549733,0,0.276242966807689,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0.784349769176855,1.46139224653261,0,0,0.170093705276516,0.431831832204279,1.54227252690289,0.541892875087706,0.501689773854853,0,0.831076008928724,0,1.09629938322967,1.8300481571743,0,0,0,0.721287081534056,0.366277859273374,0.742585499285292,0,0,0,0.193341436584244,0,0,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,1.116475108079,0,0,0,0,0.318203247925937,0,0.359744915166629,0.823611089208164,0.1178124023456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| |||
|short_description=p@chr5:90679281..90679304,+ | |||
}} |
Revision as of 06:28, 22 January 2014
Short description: | p@chr5:90679281..90679304, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:90679281..90679304, + |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.25e-31 | 98 |
blood island | 5.25e-31 | 98 |
hemolymphoid system | 3.85e-28 | 108 |
bone marrow | 3.08e-20 | 76 |
immune system | 4.32e-18 | 93 |
bone element | 5.26e-18 | 82 |
skeletal element | 1.65e-15 | 90 |
blood | 1.07e-13 | 15 |
haemolymphatic fluid | 1.07e-13 | 15 |
organism substance | 1.07e-13 | 15 |
skeletal system | 5.63e-13 | 100 |
lateral plate mesoderm | 2.23e-10 | 203 |
connective tissue | 4.53e-09 | 371 |