FFCP PHASE1:Hg19::chr5:73937062..73937074,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8507 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3345 | |||
|TSSclassifier=weak | |||
|UniProt=O14682,D6R9D7,E9PFU0,Q53XS2 | |||
|association_with_transcript=174bp_to_ENST00000302351,ENST00000508331,ENST00000509127,ENST00000510316,NM_003633,uc003kdc.3,uc011css.1_5end | |||
|description=CAGE_peak_18_at_ENC1_5end | |||
|id=chr5:73937062..73937074,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;2.47e-19;1!CL:0000346;2.55e-07;3!CL:1000428;2.55e-07;3!CL:0002580;2.55e-07;3!CL:0002334;5.98e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.30e-19,1;CL:0002580,1.93e-07,3;CL:0000346,2.19e-07,3;CL:1000428,2.19e-07,3;CL:0002334,4.71e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!4.58e-22!25;UBERON:0000203!4.58e-22!25;UBERON:0002619!3.75e-21!22;UBERON:0001869!5.34e-20!32;UBERON:0001950!9.54e-19!20;UBERON:0001893!1.93e-18!34;UBERON:0002791!3.71e-17!33;UBERON:0002020!1.79e-16!34;UBERON:0003528!1.79e-16!34;UBERON:0002780!3.41e-14!41;UBERON:0001890!3.41e-14!41;UBERON:0006240!3.41e-14!41;UBERON:0003080!1.05e-13!42;UBERON:0002616!1.56e-11!59;UBERON:0000200!7.68e-11!6;UBERON:0003056!3.06e-10!61;UBERON:0001049!3.70e-10!57;UBERON:0005068!3.70e-10!57;UBERON:0006241!3.70e-10!57;UBERON:0007135!3.70e-10!57;UBERON:0001017!3.70e-10!82;UBERON:0000955!1.41e-09!69;UBERON:0006238!1.41e-09!69;UBERON:0003075!1.98e-09!86;UBERON:0007284!1.98e-09!86;UBERON:0005743!2.60e-09!86;UBERON:0000475!4.26e-09!365;UBERON:0002346!1.19e-08!90;UBERON:0000033!1.41e-08!123;UBERON:0000073!2.58e-08!94;UBERON:0001016!2.58e-08!94;UBERON:0000153!2.78e-08!129;UBERON:0007811!2.78e-08!129;UBERON:0002108!7.75e-07!14;UBERON:0004121!7.91e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;6.11e-24;6!UBERON:0001950;3.69e-14;20!UBERON:0002619;5.83e-13;22!UBERON:0000956;1.66e-11;25!UBERON:0000203;1.66e-11;25!UBERON:0002771;2.37e-10;2!UBERON:0002360;2.37e-10;2!UBERON:0000094;2.37e-10;2!UBERON:0005406;2.37e-10;2!UBERON:0010743;2.37e-10;2!UBERON:0002791;3.20e-09;32!UBERON:0003528;8.05e-09;34!UBERON:0002020;8.05e-09;34!UBERON:0001893;8.12e-09;34!UBERON:0001869;1.99e-08;32!UBERON:0000412;2.55e-07;3!UBERON:0001992;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,6.12e-24,6;UBERON:0001950,4.30e-14,20;UBERON:0002619,6.71e-13,22;UBERON:0000956,1.88e-11,25;UBERON:0000203,1.88e-11,25;UBERON:0005406,1.72e-10,2;UBERON:0002771,2.49e-10,2;UBERON:0002360,2.99e-10,2;UBERON:0000094,2.99e-10,2;UBERON:0010743,2.99e-10,2;UBERON:0002791,4.33e-09,32;UBERON:0001869,4.33e-09,32;UBERON:0003528,1.38e-08,34;UBERON:0002020,1.38e-08,34;UBERON:0001893,1.38e-08,34;UBERON:0000412,2.19e-07,3;UBERON:0001992,2.19e-07,3;UBERON:0002780,3.36e-07,41;UBERON:0001890,3.36e-07,41;UBERON:0003080,3.36e-07,41;UBERON:0006240,3.36e-07,41 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.35142424497814,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0.744323423456331,1.84154367945675,0,0.512556597022804,0,0.64341568457443,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0.145016693914229,0,0,0.330569830721956,0,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0.19566461893209,0,0,2.41981432097328,0,0.568679216656392,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0.886351143382302,0,0.561111741760736,0.426905989478705,0,0,1.03082936549324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.236349546921671,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.668245123238271,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.328370082997356,0.340776043570843,0.339936274560377,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0.265841714557995,0,0,1.14241563650639,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.798169295285756,0.615349092722265,0.756215088665154,0.622415272177961,0.645902582527404,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.163771917510097,0.147856086217045,0.810451015420736,0,0.413373593002368,1.01465296310251,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.591954962065642,0,0,0,0,0.560544326627578,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0,0,0,0,0,0.385870790539723,0.437119121007915,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.352894871715692,0.401206833445841,0,0,0,0,1.29183831362738,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@ENC1 | |||
}} |
Revision as of 05:57, 22 January 2014
Short description: | p18@ENC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ENC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 174bp_to_ENST00000302351, ENST00000508331, ENST00000509127, ENST00000510316, NM_003633, uc003kdc.3, uc011css.1_5end |
EntrezGene: | ENC1 |
HGNC: | 3345 |
UniProt: | O14682D6R9D7E9PFU0Q53XS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.30e-19 | 1 |
preadipocyte of the breast | 1.93e-07 | 3 |
hair follicle dermal papilla cell | 2.19e-07 | 3 |
stem cell of epidermis | 2.19e-07 | 3 |
preadipocyte | 4.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 6.12e-24 | 6 |
neocortex | 4.30e-14 | 20 |
regional part of cerebral cortex | 6.71e-13 | 22 |
cerebral cortex | 1.88e-11 | 25 |
pallium | 1.88e-11 | 25 |
perirenal fat | 1.72e-10 | 2 |
middle temporal gyrus | 2.49e-10 | 2 |
meninx | 2.99e-10 | 2 |
membrane organ | 2.99e-10 | 2 |
meningeal cluster | 2.99e-10 | 2 |
regional part of telencephalon | 4.33e-09 | 32 |
cerebral hemisphere | 4.33e-09 | 32 |
brain grey matter | 1.38e-08 | 34 |
gray matter | 1.38e-08 | 34 |
telencephalon | 1.38e-08 | 34 |
dermal papilla | 2.19e-07 | 3 |
papillary layer of dermis | 2.19e-07 | 3 |
regional part of forebrain | 3.36e-07 | 41 |
forebrain | 3.36e-07 | 41 |
anterior neural tube | 3.36e-07 | 41 |
future forebrain | 3.36e-07 | 41 |