FFCP PHASE1:Hg19::chr5:54830808..54830868,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9228 | |||
|TSSclassifier=strong | |||
|UniProt=O14494,G3XA95 | |||
|association_with_transcript=4bp_to_NM_003711,NM_176895,uc003jpz.2,uc003jqa.2,uc003jqb.2_5end | |||
|description=CAGE_peak_2_at_PPAP2A_5end | |||
|id=chr5:54830808..54830868,- | |||
|ontology_enrichment_celltype=CL:0000055!3.79e-17!180;CL:0000057!8.60e-13!75;CL:0000136!2.94e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.35e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.57e-13,76;CL:0000136,2.80e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.16e-23!365;UBERON:0000468!4.25e-19!659;UBERON:0000481!8.84e-17!347;UBERON:0000119!1.10e-15!312;UBERON:0004111!2.02e-15!241;UBERON:0000483!2.13e-15!309;UBERON:0000477!1.20e-14!286;UBERON:0000467!9.25e-14!625;UBERON:0000480!9.97e-14!626;UBERON:0007023!1.33e-13!115;UBERON:0000025!3.37e-12!194;UBERON:0002616!1.76e-10!59;UBERON:0005743!3.84e-10!86;UBERON:0002100!4.99e-10!216;UBERON:0001017!7.11e-10!82;UBERON:0001049!7.28e-10!57;UBERON:0005068!7.28e-10!57;UBERON:0006241!7.28e-10!57;UBERON:0007135!7.28e-10!57;UBERON:0003075!1.08e-09!86;UBERON:0007284!1.08e-09!86;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0000922!3.18e-09!612;UBERON:0000062!3.31e-09!511;UBERON:0000033!3.51e-09!123;UBERON:0000073!1.05e-08!94;UBERON:0001016!1.05e-08!94;UBERON:0002346!2.41e-08!90;UBERON:0000153!2.72e-08!129;UBERON:0007811!2.72e-08!129;UBERON:0002050!3.04e-08!605;UBERON:0005423!3.04e-08!605;UBERON:0000064!3.73e-08!219;UBERON:0005256!3.86e-08!143;UBERON:0000923!5.11e-08!604;UBERON:0005291!5.11e-08!604;UBERON:0006598!5.11e-08!604;UBERON:0002532!5.11e-08!604;UBERON:0003103!1.77e-07!69;UBERON:0004121!2.17e-07!169;UBERON:0000486!2.54e-07!82;UBERON:0000914!4.30e-07!83;UBERON:0002329!4.30e-07!83;UBERON:0003077!4.30e-07!83;UBERON:0003059!4.30e-07!83;UBERON:0007282!4.30e-07!83;UBERON:0009618!4.30e-07!83;UBERON:0007285!4.30e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.61e-15,309;UBERON:0000483,3.10e-15,306;UBERON:0004111,6.39e-15,240;UBERON:0007023,1.41e-13,114;UBERON:0010314,4.37e-12,132;UBERON:0000025,1.03e-11,192;UBERON:0003104,9.10e-11,160;UBERON:0009142,9.10e-11,160;UBERON:0001017,1.38e-09,81;UBERON:0001049,1.51e-09,56;UBERON:0005068,1.51e-09,56;UBERON:0006241,1.51e-09,56;UBERON:0007135,1.51e-09,56;UBERON:0003075,1.95e-09,82;UBERON:0007284,1.95e-09,82;UBERON:0000955,2.22e-09,68;UBERON:0006238,2.22e-09,68;UBERON:0000073,1.05e-08,53;UBERON:0002616,1.05e-08,53;UBERON:0010371,3.00e-08,104;UBERON:0001016,3.30e-08,89;UBERON:0002100,3.88e-08,199;UBERON:0002346,4.99e-08,86;UBERON:0000922,7.83e-08,592;UBERON:0011216,9.51e-08,223;UBERON:0000486,1.61e-07,83;UBERON:0003103,2.70e-07,68;UBERON:0005256,3.51e-07,122;UBERON:0005423,4.01e-07,581;UBERON:0004121,6.86e-07,171;UBERON:0000924,6.86e-07,171;UBERON:0006601,6.86e-07,171 | |||
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| |||
|short_description=p2@PPAP2A | |||
}} |
Revision as of 05:26, 22 January 2014
Short description: | p2@PPAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_NM_003711, NM_176895, uc003jpz.2, uc003jqa.2, uc003jqb.2_5end |
EntrezGene: | PPAP2A |
HGNC: | 9228 |
UniProt: | O14494G3XA95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.57e-13 | 76 |
fat cell | 2.80e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.61e-15 | 309 |
epithelium | 3.10e-15 | 306 |
anatomical conduit | 6.39e-15 | 240 |
adult organism | 1.41e-13 | 114 |
structure with developmental contribution from neural crest | 4.37e-12 | 132 |
tube | 1.03e-11 | 192 |
mesenchyme | 9.10e-11 | 160 |
entire embryonic mesenchyme | 9.10e-11 | 160 |
central nervous system | 1.38e-09 | 81 |
neural tube | 1.51e-09 | 56 |
neural rod | 1.51e-09 | 56 |
future spinal cord | 1.51e-09 | 56 |
neural keel | 1.51e-09 | 56 |
neural plate | 1.95e-09 | 82 |
presumptive neural plate | 1.95e-09 | 82 |
brain | 2.22e-09 | 68 |
future brain | 2.22e-09 | 68 |
regional part of nervous system | 1.05e-08 | 53 |
regional part of brain | 1.05e-08 | 53 |
ecto-epithelium | 3.00e-08 | 104 |
nervous system | 3.30e-08 | 89 |
trunk | 3.88e-08 | 199 |
neurectoderm | 4.99e-08 | 86 |
embryo | 7.83e-08 | 592 |
organ system subdivision | 9.51e-08 | 223 |
multilaminar epithelium | 1.61e-07 | 83 |
compound organ | 2.70e-07 | 68 |
trunk mesenchyme | 3.51e-07 | 122 |
developing anatomical structure | 4.01e-07 | 581 |
ectoderm-derived structure | 6.86e-07 | 171 |
ectoderm | 6.86e-07 | 171 |
presumptive ectoderm | 6.86e-07 | 171 |