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FFCP PHASE1:Mm9::chr18:24762292..24762344,-: Difference between revisions

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{{FFCP|EntrezGene=106957|HGNC=|UniProt=Q8C145|association_with_transcript=0bp_to_ENSMUST00000070726,NM_139143,uc008egv.1_5end|description=CAGE_peak_1_at_Slc39a6_5end|id=chr18:24762292..24762344,-|ontology_enrichment_celltype=CL:0000393!8.22e-15!39;CL:0000211!8.22e-15!39;CL:0000540!5.21e-13!33;CL:0000047!5.21e-13!33;CL:0000031!5.21e-13!33;CL:0000404!5.21e-13!33;CL:0000055!3.19e-10!50;CL:0000221!3.65e-09!44;CL:0000133!3.65e-09!44;CL:0002319!3.66e-09!43;CL:0000117!4.78e-09!23;CL:0000337!4.78e-09!23|ontology_enrichment_celltype_v019_2=CL:0000393,8.22e-15,39;CL:0000211,8.22e-15,39;CL:0000540,5.21e-13,33;CL:0000047,5.21e-13,33;CL:0000031,5.21e-13,33;CL:0000404,5.21e-13,33;CL:0000221,3.65e-09,44;CL:0000133,3.65e-09,44;CL:0002319,3.66e-09,43;CL:0000117,4.78e-09,23;CL:0000337,4.78e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.22e-16!102;UBERON:0000924!1.22e-16!102;UBERON:0006601!1.22e-16!102;UBERON:0000073!6.35e-12!75;UBERON:0001016!6.35e-12!75;UBERON:0000153!1.78e-11!94;UBERON:0001017!7.15e-11!73;UBERON:0005743!7.15e-11!73;UBERON:0007811!9.22e-09!86;UBERON:0002346!1.19e-08!71;UBERON:0003075!1.19e-08!71;UBERON:0007284!1.19e-08!71;UBERON:0000033!9.89e-08!63;UBERON:0003056!7.09e-07!49;UBERON:0001049!8.76e-07!52;UBERON:0005068!8.76e-07!52;UBERON:0006241!8.76e-07!52;UBERON:0007135!8.76e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.45e-17,95;UBERON:0000924,6.45e-17,95;UBERON:0006601,6.45e-17,95;UBERON:0010371,3.93e-12,73;UBERON:0001016,6.35e-12,75;UBERON:0001017,7.15e-11,73;UBERON:0002346,6.81e-09,64;UBERON:0003075,6.81e-09,64;UBERON:0007284,6.81e-09,64;UBERON:0000073,2.25e-07,54;UBERON:0003056,7.09e-07,49;UBERON:0001049,8.75e-07,52;UBERON:0005068,8.75e-07,52;UBERON:0006241,8.75e-07,52;UBERON:0007135,8.75e-07,52|phase1_expression=15.534438169165,0.348975407639361,1.36499771816861,0.60492842261366,1.00179145989269,2.51818907867835,2.33612640595526,10.8463591690924,40.54715197968,36.982195158875,46.0576334526608,53.8462073218521,10.785645985666,11.9765951314026,7.32841475994458,4.85940641735582,6.29605690315332,10.7257136221801,12.2031845909108,9.76096199135469,11.8210173309987,25.120610653824,19.5899841854202,2.87986361028132,2.52350209173887,0,0,1.29282739611533,0.570070258369122,3.2763916868791,2.43903561720835,6.98533740805594,5.53558308826113,0,4.04392267651784,3.98963148860382,2.85837098767317,3.34825304589526,1.5626706890476,3.14114246384279,1.76469446409304,1.36609096991689,3.39857247121808,22.4096335996528,24.1277096302445,20.0065959856233,6.25913075478431,6.75877984779384,7.24964403023757,11.665793944457,14.8385606922884,1.43752564364972,11.2414346058683,13.7818806982155,12.7715643674136,23.9251275513431,21.4900079954068,17.0171790451556,22.4571271554154,28.5655128806898,18.3811107016792,17.2810711355257,8.00365316500025,5.39939830368839,3.9554654502679,4.9733608046227,8.38880309451533,7.30014780110954,24.5744381171092,27.94622923466,29.4454945891935,19.1386159550548,17.2277461942259,24.1306874453459,20.4150853268843,21.1420320920305,26.4278114398533,19.1531007127782,20.4296689230804,23.2119866405141,21.4995962465663,18.7528813400434,19.2636269310953,28.138130501584,23.8365266531824,28.2843442054721,22.3523538854592,28.8919141029216,48.0861327665719,35.3674901299756,8.40607017234866,4.30211938490693,4.0798280022465,2.69851595818909,1.29955283489534,2.68816132258401,7.3031098468511,17.2134625803838,15.846946280775,8.48014978824817,15.9153064347649,14.115912515575,7.64415719119937,7.11066703153331,6.27824018932521,8.86759529162845,6.57181778519218,4.45317130904334,11.1343289968284,14.8442139064825,19.0833859442749,17.354532263792,13.3756988408514,13.565037649736,15.4041206347773,8.79666139307728,10.8765785803125,6.94076913215576,9.73071607144862,16.8237523945306,5.96272099843063,7.27312879702833,1.86391761218122,17.5668478206928,8.16842156572475,4.85368404896324,13.0598485711453,10.7982491578813,12.7070227073065,28.3104308475115,12.8100168789215,26.6387226479273,19.9897968221118,13.5529192385075,23.0644729461112,18.3332627266566,21.5899451362671,8.45967400148633,19.7123751578266,17.6771158944638,21.3397526458834,18.6220704591113,21.7875177064473,14.4676625122286,19.6625482547337,19.0889443224426,14.4300655821982,17.074422468775,29.1016790459337,27.7985937846694,23.2255483896412,26.303487891309,35.0339534024253,28.5566776548177,35.6003095985742,21.0976322827603,9.83098462238529,12.610047448621,7.10408748488982,15.9486844852336,12.8989332989603,10.8037236876609,12.5474709860161,11.8058539048442,12.4956361438776,7.44108623201305,10.4626626545851,7.47298191149885,9.37991144506839,7.05920095540109,5.6748166682099,6.87139940899062,7.68425403518677,4.42881181909227,21.8701546506692,34.370140534681,2.64335026387038,2.3800550999719,20.9022485524529,17.4177503895329,16.4950350492279,12.9077455758939,9.78463392917429,9.89173255785308,2.84717436926707,9.71723832871664,7.03738584640755,9.35095418593409,8.77338392036041,6.29173586057955,3.674346847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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:106957
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8C145
|association_with_transcript=0bp_to_ENSMUST00000070726,NM_139143,uc008egv.1_5end
|cluster_id=chr18:24762292..24762344,-
|description=CAGE_peak_1_at_Slc39a6_5end
|id=chr18:24762292..24762344,-
|ontology_enrichment_celltype=CL:0000393!8.22e-15!39;CL:0000211!8.22e-15!39;CL:0000540!5.21e-13!33;CL:0000047!5.21e-13!33;CL:0000031!5.21e-13!33;CL:0000404!5.21e-13!33;CL:0000055!3.19e-10!50;CL:0000221!3.65e-09!44;CL:0000133!3.65e-09!44;CL:0002319!3.66e-09!43;CL:0000117!4.78e-09!23;CL:0000337!4.78e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000393,8.22e-15,39;CL:0000211,8.22e-15,39;CL:0000540,5.21e-13,33;CL:0000047,5.21e-13,33;CL:0000031,5.21e-13,33;CL:0000404,5.21e-13,33;CL:0000221,3.65e-09,44;CL:0000133,3.65e-09,44;CL:0002319,3.66e-09,43;CL:0000117,4.78e-09,23;CL:0000337,4.78e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.22e-16!102;UBERON:0000924!1.22e-16!102;UBERON:0006601!1.22e-16!102;UBERON:0000073!6.35e-12!75;UBERON:0001016!6.35e-12!75;UBERON:0000153!1.78e-11!94;UBERON:0001017!7.15e-11!73;UBERON:0005743!7.15e-11!73;UBERON:0007811!9.22e-09!86;UBERON:0002346!1.19e-08!71;UBERON:0003075!1.19e-08!71;UBERON:0007284!1.19e-08!71;UBERON:0000033!9.89e-08!63;UBERON:0003056!7.09e-07!49;UBERON:0001049!8.76e-07!52;UBERON:0005068!8.76e-07!52;UBERON:0006241!8.76e-07!52;UBERON:0007135!8.76e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.45e-17,95;UBERON:0000924,6.45e-17,95;UBERON:0006601,6.45e-17,95;UBERON:0010371,3.93e-12,73;UBERON:0001016,6.35e-12,75;UBERON:0001017,7.15e-11,73;UBERON:0002346,6.81e-09,64;UBERON:0003075,6.81e-09,64;UBERON:0007284,6.81e-09,64;UBERON:0000073,2.25e-07,54;UBERON:0003056,7.09e-07,49;UBERON:0001049,8.75e-07,52;UBERON:0005068,8.75e-07,52;UBERON:0006241,8.75e-07,52;UBERON:0007135,8.75e-07,52
|phase1_expression=15.534438169165,0.348975407639361,1.36499771816861,0.60492842261366,1.00179145989269,2.51818907867835,2.33612640595526,10.8463591690924,40.54715197968,36.982195158875,46.0576334526608,53.8462073218521,10.785645985666,11.9765951314026,7.32841475994458,4.85940641735582,6.29605690315332,10.7257136221801,12.2031845909108,9.76096199135469,11.8210173309987,25.120610653824,19.5899841854202,2.87986361028132,2.52350209173887,0,0,1.29282739611533,0.570070258369122,3.2763916868791,2.43903561720835,6.98533740805594,5.53558308826113,0,4.04392267651784,3.98963148860382,2.85837098767317,3.34825304589526,1.5626706890476,3.14114246384279,1.76469446409304,1.36609096991689,3.39857247121808,22.4096335996528,24.1277096302445,20.0065959856233,6.25913075478431,6.75877984779384,7.24964403023757,11.665793944457,14.8385606922884,1.43752564364972,11.2414346058683,13.7818806982155,12.7715643674136,23.9251275513431,21.4900079954068,17.0171790451556,22.4571271554154,28.5655128806898,18.3811107016792,17.2810711355257,8.00365316500025,5.39939830368839,3.9554654502679,4.9733608046227,8.38880309451533,7.30014780110954,24.5744381171092,27.94622923466,29.4454945891935,19.1386159550548,17.2277461942259,24.1306874453459,20.4150853268843,21.1420320920305,26.4278114398533,19.1531007127782,20.4296689230804,23.2119866405141,21.4995962465663,18.7528813400434,19.2636269310953,28.138130501584,23.8365266531824,28.2843442054721,22.3523538854592,28.8919141029216,48.0861327665719,35.3674901299756,8.40607017234866,4.30211938490693,4.0798280022465,2.69851595818909,1.29955283489534,2.68816132258401,7.3031098468511,17.2134625803838,15.846946280775,8.48014978824817,15.9153064347649,14.115912515575,7.64415719119937,7.11066703153331,6.27824018932521,8.86759529162845,6.57181778519218,4.45317130904334,11.1343289968284,14.8442139064825,19.0833859442749,17.354532263792,13.3756988408514,13.565037649736,15.4041206347773,8.79666139307728,10.8765785803125,6.94076913215576,9.73071607144862,16.8237523945306,5.96272099843063,7.27312879702833,1.86391761218122,17.5668478206928,8.16842156572475,4.85368404896324,13.0598485711453,10.7982491578813,12.7070227073065,28.3104308475115,12.8100168789215,26.6387226479273,19.9897968221118,13.5529192385075,23.0644729461112,18.3332627266566,21.5899451362671,8.45967400148633,19.7123751578266,17.6771158944638,21.3397526458834,18.6220704591113,21.7875177064473,14.4676625122286,19.6625482547337,19.0889443224426,14.4300655821982,17.074422468775,29.1016790459337,27.7985937846694,23.2255483896412,26.303487891309,35.0339534024253,28.5566776548177,35.6003095985742,21.0976322827603,9.83098462238529,12.610047448621,7.10408748488982,15.9486844852336,12.8989332989603,10.8037236876609,12.5474709860161,11.8058539048442,12.4956361438776,7.44108623201305,10.4626626545851,7.47298191149885,9.37991144506839,7.05920095540109,5.6748166682099,6.87139940899062,7.68425403518677,4.42881181909227,21.8701546506692,34.370140534681,2.64335026387038,2.3800550999719,20.9022485524529,17.4177503895329,16.4950350492279,12.9077455758939,9.78463392917429,9.89173255785308,2.84717436926707,9.71723832871664,7.03738584640755,9.35095418593409,8.77338392036041,6.29173586057955,3.6743468478698,1.7922714592893,21.0531370057921,18.5082590427761,15.7790829942313,14.255592949172,16.8738663835834,12.4841759404767,8.28398636327771,5.90440591918409,6.27994911365499,6.78684401569903,4.15033677922008,6.17326891149548,6.87956482896211,4.04751802292737,5.68008339887808,4.10001171579109,2.5462585178142,4.89083433666378,4.05338066937588,3.29473695825698,4.31304619582064,7.44281895337007,5.30464044294753,3.28352541331245,2.15276896226295,3.37710464954357,15.7040211641614,17.0542270593436,15.9705676913185,15.4468028055421,11.7345124144251,10.0503754465089,12.6163129669587,11.7080188714679,21.7536498866544,16.6098517236581,15.9454768657487,15.5670148979951,13.6421135674058,12.2951699794285,9.04747703635634,13.5976420954677,42.2917274796371,19.8674457339407,23.4403861382176,24.4972424977705,17.8689090460576,4.03953483526997,28.0802315280468,18.350620981942,20.8960695800815,26.5255365727333,30.9690156974528,22.6461224631066,32.7896668356664,34.7784470914461,36.7617633490267,25.7057053137446,15.1875891172847,22.6143316657414,19.7093220817827,17.3218629121162,3.98235415019888,16.5090832585387,10.883648050731,9.6188590675508,11.8120757152309,14.7568871013085,14.4719844174204,9.08834323693764,10.6949213515416,7.26884543252377,5.27093042874994,8.25084345985495,13.6175842301515,16.3855595568492,16.8166288917581,17.1469628025274,16.3153014950892,16.9450376721967,17.7712942250291,20.7036165397928,30.0379786321549,24.5725202202031,6.61585194164886,26.8764592294612,27.9333458183917,36.1877549568935,48.2264269772671,54.8230605148505,4.08073171281791,19.4696567111035,10.9357363710626,11.9704383418669,10.1856990053341,5.08594833912666,9.02181902958766,6.86334519619568,9.34881364966204,10.9162132812453,10.3649980353318,3.81868247206045,23.0925275314229,16.062237903021,14.9047370334086,18.8179466413022,15.5037420259786,19.1507371866445,16.5306911450672,12.8260411572175,2.85152941241944,9.32008969630389,13.5286305284206,23.4740977289047,19.8550188548517,27.2231663681667,22.2154896381697,20.7816034353657,27.1095221271692,26.8221032778537,44.5652213809271,27.5405897741647,16.1296803504405,21.8047673233443,20.8806971748869,16.5364641035372,18.1889152168913,15.0382424360684,13.7090134799073,13.9426721443164,13.7351260272357,14.8420681423777,15.39377494431,14.518970659705,16.7627554872374,11.9302683634009,12.8564592399726,28.5680283355166,6.88156455459601,13.6365062046403,10.4088462145729,14.2960299583821,24.2110393332025,18.3151624267265,42.6593074367341,9.02829787263654,16.942555278512,12.889106622201,13.1765968091061,12.7171354934329,8.22099023724771,16.6186657425734,17.550585006027,14.8605997063993,9.5159905886683,12.9440077937955,10.0673727156651,22.7444177838588,18.9514302387089,21.8796045361465,11.528723944539,8.27295788025063,13.5570503958985,17.512979865306,15.4041220604071,14.6564382823003,18.5039888919875,14.7128546281139,12.3606789860245,11.1403765184473,11.6019647290339,14.2888107384922,18.3097234992872,14.2752823143142,12.7746629249025,15.6030855342461,18.5149396288124,12.4233064311536,14.7830437767339,15.8427594129238,15.7162665293602,14.7229417731517,13.9025259383307,8.94437018888666,9.77789619690205,16.2731258780744,14.2362021749009,11.9190423674432,13.5046244245997,13.789378865551,17.9403148212461,26.9795424172982,15.6734177658424,17.8342974860088,20.0852748672286,16.1031735957246,12.5208631235028
|short_description=p1@Slc39a6
}}

Revision as of 14:40, 5 August 2015

Short description:p1@Slc39a6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc39a6_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000070726, NM_139143, uc008egv.1_5end
EntrezGene:106957
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Slc39a6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F236.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E646.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F153.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.20
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.59
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.77
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.93
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.49
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C322.46
Mouse Granule cells, donor2.CNhs12357.11731-123E328.57
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.35
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.89
Mouse Schwann, donor1.CNhs12507.11728-123D948.09
Mouse Schwann, donor2.CNhs12573.11746-123F935.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.45
accessory axillary lymph node, adult.CNhs10475.1063-29H911.13
adrenal gland, adult.CNhs10508.49-24D714.84
adrenal gland, embryo E14.CNhs11038.406-44C519.08
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C115.40
adrenal gland, neonate N25.CNhs11223.1377-27I38.80
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H16.94
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F516.82
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.71
corpora quadrigemina, adult.CNhs10501.16-22A428.31
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F126.64
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F223.06
diencephalon, neonate N30.CNhs11201.1388-42B218.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.46
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G417.68
eyeball, embryo E12.CNhs11016.345-16C621.34
eyeball, embryo E14.CNhs10521.399-16E218.62
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D414.47
eyeball, neonate N00.CNhs11207.633-15C619.66
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G814.43
eyeball, neonate N16.CNhs11188.777-19A217.07
forelimb, embryo E11.CNhs10596.335-25E229.10
forelimb, embryo E12.CNhs10600.359-14H227.80
forelimb, embryo E13.CNhs10589.384-1E223.23
forelimb, embryo E14.CNhs10577.413-26A826.30
forelimb, embryo E15.CNhs11007.437-20E735.03
forelimb, embryo E17.CNhs10598.1517-43C428.56
forelimb, embryo E18.CNhs11008.1520-43B535.60
gonad, embryo E13.CNhs11044.1564-45I621.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C612.50
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E37.47
heart, neonate N03.CNhs11221.1349-25I29.38
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E821.87
hippocampus, neonate N00.CNhs11228.627-43G134.37
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I520.90
intestine, embryo E13.CNhs11010.381-16D517.42
intestine, embryo E15.CNhs10602.976-16D816.50
intestine, embryo E16.CNhs10585.463-22H412.91
intestine, embryo E17.CNhs10582.482-18D39.78
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E99.72
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I921.05
kidney, embryo E15.CNhs10997.434-16F818.51
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G712.48
kidney, neonate N10.CNhs11206.758-6D58.28
kidney, neonate N20.CNhs11113.832-19I15.90
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B115.70
lung, embryo E12.CNhs10522.354-16G217.05
lung, embryo E14.CNhs10604.404-26F815.97
lung, embryo E15.CNhs11020.432-17C515.45
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A610.05
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C611.71
lung, neonate N06.CNhs11212.683-20E521.75
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E615.95
lung, neonate N20.CNhs11109.822-18A415.57
lung, neonate N25.CNhs11119.1359-25C713.64
lung, neonate N30.CNhs11133.1394-42H212.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B642.29
mammary gland, adult pregnant day19.CNhs10476.588-5H219.87
medulla oblongata, adult.CNhs10477.17-12C223.44
medulla oblongata, neonate N30.CNhs11200.1396-42A324.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.08
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.53
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.65
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D432.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D636.76
olfactory brain, adult.CNhs10489.18-22I925.71
ovary, adult.CNhs10507.91-2I715.19
ovary, embryo E18.CNhs11040.505-44H722.61
ovary, neonate N00.CNhs11217.1299-22I419.71
oviduct, adult pregnant day01.CNhs10500.988-6G617.32
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G311.81
pancreas, embryo E18.CNhs10580.1535-43I714.76
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C716.82
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B916.32
pituitary gland, embryo E16.CNhs11036.449-43F616.95
pituitary gland, embryo E17.CNhs11039.1265-44F517.77
pituitary gland, neonate N00.CNhs11190.1308-22E920.70
placenta, adult pregnant day10.CNhs10472.539-13I730.04
placenta, adult pregnant day17.CNhs10464.577-18G324.57
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C326.88
skin, neonate N00.CNhs11124.650-25G427.93
skin, neonate N03.CNhs11215.662-22H336.19
skin, neonate N06.CNhs11097.693-20I548.23
skin, neonate N10.CNhs11108.762-6C454.82
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C919.47
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F210.19
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H19.02
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.36
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E323.09
stomach, embryo E15.CNhs10603.1252-16G816.06
stomach, embryo E16.CNhs11022.459-17D414.90
stomach, embryo E17.CNhs11006.1035-18D518.82
stomach, embryo E18.CNhs10999.1286-20C615.50
stomach, neonate N03.CNhs11193.1340-24B819.15
stomach, neonate N07.CNhs11210.718-18A916.53
stomach, neonate N25.CNhs11104.1355-25E412.83
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F523.47
testis, embryo E15.CNhs11034.443-27C519.86
testis, embryo E16.CNhs11033.470-26G527.22
testis, embryo E17.CNhs11029.486-18I522.22
testis, embryo E18.CNhs11027.503-18G520.78
testis, neonate N00.CNhs11189.1300-22B727.11
testis, neonate N07.CNhs11222.726-26I426.82
testis, neonate N10.CNhs11204.763-44D944.57
testis, neonate N20.CNhs11110.839-18H327.54
testis, neonate N30.CNhs11130.1391-42E216.13
thymus, adult.CNhs10471.38-12B521.80
thymus, embryo E14.CNhs11041.402-44I420.88
thymus, embryo E15.CNhs11005.430-45I216.54
thymus, embryo E16.CNhs11002.456-26C518.19
thymus, embryo E17.CNhs10581.478-18C115.04
thymus, embryo E18.CNhs10595.1273-19G413.71
thymus, neonate N02.CNhs11181.1541-43F813.94
thymus, neonate N03.CNhs11137.2104-43C713.74
thymus, neonate N06.CNhs11197.681-26C414.84
thymus, neonate N07.CNhs11211.713-19D315.39
thymus, neonate N10.CNhs11194.748-24E414.52
thymus, neonate N20.CNhs11186.820-7A216.76
thymus, neonate N25.CNhs11125.1362-25G711.93
thymus, neonate N30.CNhs11132.1393-42G212.86
tongue, adult.CNhs10499.32-1B428.57
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.64
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.41
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F524.21
uterus, adult.CNhs10509.92-27E518.32
vagina, adult.CNhs10502.89-27D542.66
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I810.07
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H218.95
whole body, embryo E14.5.CNhs10578.420-27D221.88
whole body, embryo E14.CNhs10519.395-14B111.53
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I526.98
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C217.83
whole body, neonate N01.CNhs10576.659-23C620.09
whole body, neonate N06.CNhs10515.692-21D116.10
whole body, neonate N10.CNhs10518.761-6B412.52





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell8.22e-1539
electrically active cell8.22e-1539
neuron5.21e-1333
neuronal stem cell5.21e-1333
neuroblast5.21e-1333
electrically signaling cell5.21e-1333
ectodermal cell3.65e-0944
neurectodermal cell3.65e-0944
neural cell3.66e-0943
CNS neuron (sensu Vertebrata)4.78e-0923
neuroblast (sensu Vertebrata)4.78e-0923

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure6.45e-1795
ectoderm6.45e-1795
presumptive ectoderm6.45e-1795
ecto-epithelium3.93e-1273
nervous system6.35e-1275
central nervous system7.15e-1173
neurectoderm6.81e-0964
neural plate6.81e-0964
presumptive neural plate6.81e-0964
regional part of nervous system2.25e-0754
pre-chordal neural plate7.09e-0749
neural tube8.75e-0752
neural rod8.75e-0752
future spinal cord8.75e-0752
neural keel8.75e-0752
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