FFCP PHASE1:Hg19::chr5:49962784..49962805,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79668 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26124 | |||
|TSSclassifier=strong | |||
|UniProt=D6RCN2,D6RF37,D6RC81 | |||
|association_with_transcript=0bp_to_ENST00000503665,ENST00000503707,ENST00000506369,ENST00000513738_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_PARP8_5end | |||
|id=chr5:49962784..49962805,+ | |||
|ontology_enrichment_celltype=CL:0002087!9.05e-26!119;CL:0000738!1.05e-25!140;CL:0000037!5.21e-22!172;CL:0000566!5.21e-22!172;CL:0002032!1.27e-20!165;CL:0000837!1.27e-20!165;CL:0000766!3.41e-20!76;CL:0002031!1.93e-19!124;CL:0002194!9.32e-19!63;CL:0000576!9.32e-19!63;CL:0000040!9.32e-19!63;CL:0000559!9.32e-19!63;CL:0000988!4.94e-18!182;CL:0002009!4.40e-17!65;CL:0002057!7.94e-16!42;CL:0000557!9.68e-15!71;CL:0000839!1.51e-14!70;CL:0000763!6.60e-14!112;CL:0000049!6.60e-14!112;CL:0000860!2.76e-13!45;CL:0000791!2.08e-08!18;CL:0000789!2.08e-08!18;CL:0002420!2.08e-08!18;CL:0002419!2.08e-08!18;CL:0000790!2.08e-08!18;CL:0000838!6.92e-07!52;CL:0000542!8.53e-07!53;CL:0000051!8.53e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-20;33!CL:0002057;3.42e-20;33!CL:0000473;2.33e-19;39!CL:0000234;2.33e-19;39!CL:0000576;1.47e-16;48!CL:0000766;1.67e-12;69!CL:0002087;2.57e-10;104!CL:0000791;5.19e-10;18!CL:0000789;5.19e-10;18!CL:0002419;5.19e-10;18!CL:0000625;1.74e-08;11!CL:0000763;1.82e-08;100!CL:0000738;3.92e-08;136!CL:0000094;5.50e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.03e-34,136;CL:0002087,9.67e-34,115;CL:0000037,9.02e-32,168;CL:0000766,3.02e-31,72;CL:0002032,1.14e-29,161;CL:0000837,1.14e-29,161;CL:0002194,5.77e-29,59;CL:0000576,5.77e-29,59;CL:0000040,5.77e-29,59;CL:0000559,5.77e-29,59;CL:0000988,4.10e-28,177;CL:0002009,2.63e-27,61;CL:0002031,3.52e-27,120;CL:0000473,7.70e-25,48;CL:0000234,7.70e-25,48;CL:0000557,6.66e-24,67;CL:0000763,1.14e-23,108;CL:0000049,1.14e-23,108;CL:0000839,1.24e-23,66;CL:0000860,1.68e-21,42;CL:0002057,1.68e-21,42;CL:0000791,7.33e-10,18;CL:0000789,7.33e-10,18;CL:0002420,7.33e-10,18;CL:0002419,7.33e-10,18;CL:0000790,7.33e-10,18;CL:0000625,2.04e-08,11;CL:0000094,5.03e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.12e-15;42!CL:0000790;5.19e-10;18!CL:0000049;9.58e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.96e-19!102;UBERON:0003061!9.96e-19!102;UBERON:0002193!3.00e-14!112;UBERON:0002371!2.54e-12!80;UBERON:0001474!1.11e-10!86;UBERON:0004765!2.91e-08!101;UBERON:0001434!2.91e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.38e-09;15!UBERON:0000179;5.38e-09;15!UBERON:0000463;5.38e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.02e-29,98;UBERON:0003061,8.02e-29,98;UBERON:0002193,2.87e-24,108;UBERON:0002371,3.06e-20,76;UBERON:0001474,4.26e-18,82;UBERON:0002405,2.71e-17,93;UBERON:0004765,3.50e-16,90;UBERON:0001434,1.37e-12,100;UBERON:0000178,5.65e-09,15;UBERON:0000179,5.65e-09,15;UBERON:0000463,5.65e-09,15;UBERON:0003081,1.09e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.845726424575827,0,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0.527533956456907,0.495065411840187,0,3.36162573225888,1.20538905604795,2.19093027116212,0.975865597581014,0,0,0.626909442956176,0,0.136874425072884,0,0.840547463227464,1.14940825229924,0.393553906568396,1.57345710739562,5.37361157336098,3.2511385896376,0,0.90361775633475,1.10926203050036,0.619737604642413,0.710846162437108,0,4.43196326825502,5.61524452916397,3.03815219002193,2.68698569087909,4.53451132426571,2.57575567634187,5.52513307362346,3.40088349319928,1.21292030593908,2.55671940596253,1.23350366406548,3.71647645074124,3.45230870786581,4.09857130446561,1.6553756092201,8.27389633767885,3.87290810150296,1.35426486594342,3.9530891303947,3.547779950752,1.57306439111559,7.34601341690166,3.53021929783703,3.83602275479425,3.29851300186716,4.3882004676759,2.13112375266347,4.35313857942876,3.97169657283798,2.4912889959823,3.76872997885115,6.25779502104242,2.38907729175628,5.44859552370032,4.05105399586321,1.58231193720442,1.05627643155971,3.18906449947565,0,6.29040334420373,7.95937532059983,3.69668849403284,0.285012743741249,0.59675003159727,0.182664153764634,0,1.09227722252426,1.77901850772711,0.426730222566507,0,1.72425731986345,0.661044872784862,1.90810750907073,4.55370375287559,3.52342313622563,4.96955196562797,1.32171328579026,1.12101712596307,1.05353633910031,6.09800287352883,2.35806457649499,7.40165396398233,0.83593247695339,0.651844533267181,0.473447805734733,1.94826728407911,2.78526142212934,2.06224135232386,2.43687284041983,2.97884250141517,1.0247305578054,1.30059347559878,4.27538551969558,2.21080014228679,4.34704628602579,5.04174314751005,4.0131124213457,7.31748666634838,4.64568305060021,4.21542542962113,2.40539211837841,6.83153168452658,1.27426165729639,1.30216690771284,3.8018081777935,4.9689789295665,5.37543766848557,1.24930726552346,3.78843603270427,3.28451198768419,9.87873041801189,13.1045695933919,8.25499102131954,0,0.670700859703636,0.511450247374121,0,0,0.144846518960824,0,0.973269740605272,0.378139268656271,0.665188192387692,0.43917392846563,0.654895377488563,0,0,1.62273696827342,1.56716763569341,2.12732736830184,1.19245312152671,1.14398982156026,3.34311751196608,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,7.75560528296651,0.436094052142534,0.496971951695318,0.506522046658319,3.17782033951725,3.72887606973458,0.354668382198357,0,0,0.24666754841716,0.311211035399766,1.21239604862719,0.163461903113459,0.605429710579726,0,0.468642863667593,0,0,0.298897361103602,0.469737994575059,0.323745888736263,0.421352420106746,0.204154171254893,1.10550885580591,0.723280468230358,1.18800285728205,1.23633464639278,0,0.718618141816238,0.841680569770331,0.375355559615893,0.554128230968366,0,0.30648779579902,0.300476117813194,0.453728732640084,0,0.213557388818567,0,0,0.206105058476878,1.28820270022815,0.18611685633159,0.337552664482532,0,0,0,0,0,0,0,1.15956511897978,0.545492241181669,2.29443676311203,0.243947412259191,0.927708378250397,0.580969714347592,1.24393266018445,0.504641701751257,2.91981887260664,1.56449532329816,0.643240938192885,0,0,0,0.709840800239063,0.337169380156203,0.482022059766964,0.661763836394364,0.653638332277218,0.949082476444386,0.269662616320329,0.588664395376038,0,0,0,0,0,0,0,0,0.441463099414651,0,0.686271241194102,1.31700342490351,1.1240175325762,0.301586917234893,1.75918045801206,0,0,0,0.34779121492523,0.70445216541493,0,0,0,0.790204397959275,0,2.70838706696137,1.8720341211139,1.78357394746474,0,1.51183915378974,1.70130116690864,1.52249488594842,0.871901815541886,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0.063497894292169,0.381988425558278,0,0,1.13110241973656,0,2.28661146104463,0,0,0.1466765716419,0.904902010304444,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0,0,0.325736184293735,0,0,0.602878754119172,0,0.399891964728228,2.43247561282381,2.00902836572851,4.21667878966063,0,0,0,1.15825045334063,0.821905290201534,0.179060963239896,0.784596007954691,9.65450724989443,10.9970063178354,6.16046574142792,1.27047312111232,1.30139853857622,0.773288812777695,0.167516265334349,0,29.2112739339401,26.9245313283622,48.9010305854522,0.12269149171914,0,0.542530047399471,0,0.356857977594324,0.315404830067869,0,0.601892199455438,0,2.0694614258501,1.32845119707087,0.553107505625109,0.260650843404249,0.195801157462741,0.343143423810856,6.6165768359324,7.76571122947021,5.87001567918944,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0,0.896974044789907,0.511707249066704,0.482561763430822,0,0.925258162815933,0.177561725313127,0.246381468041427,2.07701771673448,0.116210378459959,0,1.20303882181971,0.368323955743585,0.918515585316854,0.364182336013434,0.262248829918848,0,0.847168708148562,0,0,1.89992932007176,0,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,1.13345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| |||
|short_description=p2@PARP8 | |||
}} |
Revision as of 05:20, 22 January 2014
Short description: | p2@PARP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PARP8_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000503665, ENST00000503707, ENST00000506369, ENST00000513738_5end |
EntrezGene: | PARP8 |
HGNC: | 26124 |
UniProt: | D6RCN2D6RF37D6RC81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.03e-34 | 136 |
nongranular leukocyte | 9.67e-34 | 115 |
hematopoietic stem cell | 9.02e-32 | 168 |
myeloid leukocyte | 3.02e-31 | 72 |
hematopoietic oligopotent progenitor cell | 1.14e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-29 | 161 |
monopoietic cell | 5.77e-29 | 59 |
monocyte | 5.77e-29 | 59 |
monoblast | 5.77e-29 | 59 |
promonocyte | 5.77e-29 | 59 |
hematopoietic cell | 4.10e-28 | 177 |
macrophage dendritic cell progenitor | 2.63e-27 | 61 |
hematopoietic lineage restricted progenitor cell | 3.52e-27 | 120 |
defensive cell | 7.70e-25 | 48 |
phagocyte | 7.70e-25 | 48 |
granulocyte monocyte progenitor cell | 6.66e-24 | 67 |
myeloid cell | 1.14e-23 | 108 |
common myeloid progenitor | 1.14e-23 | 108 |
myeloid lineage restricted progenitor cell | 1.24e-23 | 66 |
classical monocyte | 1.68e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-21 | 42 |
mature alpha-beta T cell | 7.33e-10 | 18 |
alpha-beta T cell | 7.33e-10 | 18 |
immature T cell | 7.33e-10 | 18 |
mature T cell | 7.33e-10 | 18 |
immature alpha-beta T cell | 7.33e-10 | 18 |
CD8-positive, alpha-beta T cell | 2.04e-08 | 11 |
granulocyte | 5.03e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.02e-29 | 98 |
blood island | 8.02e-29 | 98 |
hemolymphoid system | 2.87e-24 | 108 |
bone marrow | 3.06e-20 | 76 |
bone element | 4.26e-18 | 82 |
immune system | 2.71e-17 | 93 |
skeletal element | 3.50e-16 | 90 |
skeletal system | 1.37e-12 | 100 |
blood | 5.65e-09 | 15 |
haemolymphatic fluid | 5.65e-09 | 15 |
organism substance | 5.65e-09 | 15 |
lateral plate mesoderm | 1.09e-07 | 203 |