Personal tools

FFCP PHASE1:Mm9::chr17:74738246..74738278,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=50850|HGNC=|MCL_coexpression_id=0|UniProt=Q9QYY8|association_with_transcript=-48bp_to_ENSMUST00000024869,NM_001162870,NM_016962,uc008dnz.2,uc008doa.2_5end|description=CAGE_peak_3_at_Spast_5end|id=chr17:74738246..74738278,+|ontology_enrichment_celltype=CL:0000540!9.35e-10!33;CL:0000047!9.35e-10!33;CL:0000031!9.35e-10!33;CL:0000404!9.35e-10!33;CL:0000117!1.03e-07!23;CL:0000337!1.03e-07!23;CL:0000393!8.17e-07!39;CL:0000211!8.17e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-11,33;CL:0000047,1.10e-11,33;CL:0000031,1.10e-11,33;CL:0000404,1.10e-11,33;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0000393,6.34e-09,39;CL:0000211,6.34e-09,39;CL:0000221,4.70e-08,44;CL:0000133,4.70e-08,44;CL:0002319,1.53e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005085,3.38e-09,13;UBERON:0004121,7.68e-08,95;UBERON:0000924,7.68e-08,95;UBERON:0006601,7.68e-08,95;UBERON:0010371,5.07e-07,73|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,1.34303417529512,0,0.258246646883153,2.25261955442667,1.17032263160997,0.513653904676515,0.159544317990673,0.171200729931206,0.262261207256992,0,0.809901069559304,0,0.473193248037357,0,0,7.56885282344521,0.297872853602656,0.522399578277871,0.47997726838022,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0,0.756090389279792,0.886922042621219,0.635030673459631,0,0,0.866554859253824,1.16364251750945,1.42918549383658,0,0,0.523523743973798,0,0,0.971020706062307,0.251793635951155,0.304130793658544,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0.515672092277442,2.42779753031517,3.70293685490423,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.829516898467821,2.02508907497536,0.630974884054146,0.571301968807607,0.883474163806454,1.71487118900936,1.91690942036473,0.919218786610021,2.20231761998777,0.638436690425939,0.614426133024974,3.03338461779446,2.37867873366265,2.6045668527838,1.11673199600552,0,1.06958773443767,2.06240009831567,1.99320353118744,2.23679334990361,0.227178579999552,0.0755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,1.54488862144927,0.170430322578058,0.259786004602869,0,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,1.37020655662872,0,0.29688427812965,0.867426633830679,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.628332956648377,0,0.433798070759735,0.884610551949874,0.970601099684455,1.98757366614354,0.484875253135222,0,0.585561594023094,1.25668024088073,0.255457055208591,0.359445373517761,0.599902730993408,0,0.599162557619291,0,0.753926112677186,0.347648640384553,0.255715457330331,0.83115217823824,1.29793010454206,0.916554274652847,0.622034853050465,0,1.05220927943237,0.520481771850815,1.60931473103431,1.44049703844279,1.9591626318643,2.58538696775046,1.92170580427275,2.71735001223214,0.517406741478031,1.29340795759705,0.945530400839096,1.40760899331159,0.43839146485515,0,1.0447564995665,0.411564272815887,1.39323986772945,0.702213187313235,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0.930135779001631,0.536546802799238,0.817357396570186,0.329119699826961,0.164167464079095,0.56748166682099,0.584799949701329,0.878200461164203,0.805238512562231,0.630869845692382,0.92614151141356,0,0,0,0.928946687441754,0.902072229254653,0.201683524623343,0,0.951128130562796,0,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0.569003702859245,1.37098215131675,2.25415471346161,0.610953983535943,0.387904974335251,0.841629838683823,0.442655759869801,0.147610147979602,0.31399745568275,0.123397163921801,0.889357881261447,0.166845105716094,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0,0.575392274901621,0.162135226775035,0.823684239564244,0,0.372140947668503,0.312037673114561,0,0.538192240565737,2.41221760681684,0,0.947457058852424,0.814824882210129,0.678980343100753,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,1.47529281905711,1.65562047782839,1.60550589987792,1.87538698547525,0.819674726883377,2.52470927204373,0.94652465824877,1.17131623288992,2.15423397732799,1.67278158566786,0.891194696329576,0.283076530788832,0.404810701674894,1.46127928955656,1.58115111178609,0.642642632843614,0,0.178065603667255,0.651547837414304,0,0,0.728341908464944,0.604647113929502,0.754420319023592,1.47650946440386,1.53717573971964,1.29214146584111,1.45413491791002,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.776152102696527,2.14337035031592,1.24138163549592,0.891844088010353,0.493647061806363,0.608929898229199,0,0,0.441056796109924,0.8244312647074,0.645857706783622,0.422190474497091,0.596861720015682,0.492422699235184,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.740778109478847,0.376736914009382,0.410082683163076,0.457556346413045,0.509935289981566,0.979660166265606,0.967399816630967,0,1.58167996790568,0.406638934253697,0.432021363287205,0.836353184057875,0.436725127492355,0.404593039154462,0.743881101528023,1.57053565190418,0.259229946583586,0.621339313086926,41.1495845239459,0.448549638131936,0,0.972255941720238,0.645799117388655,0.844780627453891,0.938857909166032,0.911430693907651,1.04859344425711,10.3881171955183,25.3466405506922,0.632022241256357,0.202725215290164,0.513554785824136,1.03936658382236,0.895133478337407,1.19208812868759,1.56254084375959,1.62458479892035,0.908698049533329,0.914481679859998,0.705783295957884,0.682205165178267,1.25075394132428,0.233753804363138,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.549454872801795,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,1.66059756134683,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,1.47074806760011,0.44449345560323,0.206035057238894,1.60459604795908,0.252697211763798,1.2673964994512,1.13175804831646,1.03005658216871,0.448176066834085,1.20614484806788,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,0.238436189947321,0.872078499793971,0.658765662907314,0.846146078916765,0.365855945745545,0,1.22223702461276,0.561142271657738,1.06771516311757,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,0.999242311751784,0.233931608445408,1.07435527024149,0.382576664137687,0.220591419119515,0.695603506861264|short_description=p3@Spast}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:50850
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:Q9QYY8
|association_with_transcript=-48bp_to_ENSMUST00000024869,NM_001162870,NM_016962,uc008dnz.2,uc008doa.2_5end
|cluster_id=chr17:74738246..74738278,+
|description=CAGE_peak_3_at_Spast_5end
|id=chr17:74738246..74738278,+
|ontology_enrichment_celltype=CL:0000540!9.35e-10!33;CL:0000047!9.35e-10!33;CL:0000031!9.35e-10!33;CL:0000404!9.35e-10!33;CL:0000117!1.03e-07!23;CL:0000337!1.03e-07!23;CL:0000393!8.17e-07!39;CL:0000211!8.17e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-11,33;CL:0000047,1.10e-11,33;CL:0000031,1.10e-11,33;CL:0000404,1.10e-11,33;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0000393,6.34e-09,39;CL:0000211,6.34e-09,39;CL:0000221,4.70e-08,44;CL:0000133,4.70e-08,44;CL:0002319,1.53e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0005085,3.38e-09,13;UBERON:0004121,7.68e-08,95;UBERON:0000924,7.68e-08,95;UBERON:0006601,7.68e-08,95;UBERON:0010371,5.07e-07,73
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,1.34303417529512,0,0.258246646883153,2.25261955442667,1.17032263160997,0.513653904676515,0.159544317990673,0.171200729931206,0.262261207256992,0,0.809901069559304,0,0.473193248037357,0,0,7.56885282344521,0.297872853602656,0.522399578277871,0.47997726838022,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0,0.756090389279792,0.886922042621219,0.635030673459631,0,0,0.866554859253824,1.16364251750945,1.42918549383658,0,0,0.523523743973798,0,0,0.971020706062307,0.251793635951155,0.304130793658544,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0.515672092277442,2.42779753031517,3.70293685490423,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.829516898467821,2.02508907497536,0.630974884054146,0.571301968807607,0.883474163806454,1.71487118900936,1.91690942036473,0.919218786610021,2.20231761998777,0.638436690425939,0.614426133024974,3.03338461779446,2.37867873366265,2.6045668527838,1.11673199600552,0,1.06958773443767,2.06240009831567,1.99320353118744,2.23679334990361,0.227178579999552,0.0755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,1.54488862144927,0.170430322578058,0.259786004602869,0,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,1.37020655662872,0,0.29688427812965,0.867426633830679,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.628332956648377,0,0.433798070759735,0.884610551949874,0.970601099684455,1.98757366614354,0.484875253135222,0,0.585561594023094,1.25668024088073,0.255457055208591,0.359445373517761,0.599902730993408,0,0.599162557619291,0,0.753926112677186,0.347648640384553,0.255715457330331,0.83115217823824,1.29793010454206,0.916554274652847,0.622034853050465,0,1.05220927943237,0.520481771850815,1.60931473103431,1.44049703844279,1.9591626318643,2.58538696775046,1.92170580427275,2.71735001223214,0.517406741478031,1.29340795759705,0.945530400839096,1.40760899331159,0.43839146485515,0,1.0447564995665,0.411564272815887,1.39323986772945,0.702213187313235,0.257347907114715,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0.196764231747404,0.462801338662135,0.930135779001631,0.536546802799238,0.817357396570186,0.329119699826961,0.164167464079095,0.56748166682099,0.584799949701329,0.878200461164203,0.805238512562231,0.630869845692382,0.92614151141356,0,0,0,0.928946687441754,0.902072229254653,0.201683524623343,0,0.951128130562796,0,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,0.569003702859245,1.37098215131675,2.25415471346161,0.610953983535943,0.387904974335251,0.841629838683823,0.442655759869801,0.147610147979602,0.31399745568275,0.123397163921801,0.889357881261447,0.166845105716094,0.196558995113203,0.674586337154561,0.405720242777006,0.241177159752417,0,0.575392274901621,0.162135226775035,0.823684239564244,0,0.372140947668503,0.312037673114561,0,0.538192240565737,2.41221760681684,0,0.947457058852424,0.814824882210129,0.678980343100753,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,1.47529281905711,1.65562047782839,1.60550589987792,1.87538698547525,0.819674726883377,2.52470927204373,0.94652465824877,1.17131623288992,2.15423397732799,1.67278158566786,0.891194696329576,0.283076530788832,0.404810701674894,1.46127928955656,1.58115111178609,0.642642632843614,0,0.178065603667255,0.651547837414304,0,0,0.728341908464944,0.604647113929502,0.754420319023592,1.47650946440386,1.53717573971964,1.29214146584111,1.45413491791002,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.776152102696527,2.14337035031592,1.24138163549592,0.891844088010353,0.493647061806363,0.608929898229199,0,0,0.441056796109924,0.8244312647074,0.645857706783622,0.422190474497091,0.596861720015682,0.492422699235184,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.740778109478847,0.376736914009382,0.410082683163076,0.457556346413045,0.509935289981566,0.979660166265606,0.967399816630967,0,1.58167996790568,0.406638934253697,0.432021363287205,0.836353184057875,0.436725127492355,0.404593039154462,0.743881101528023,1.57053565190418,0.259229946583586,0.621339313086926,41.1495845239459,0.448549638131936,0,0.972255941720238,0.645799117388655,0.844780627453891,0.938857909166032,0.911430693907651,1.04859344425711,10.3881171955183,25.3466405506922,0.632022241256357,0.202725215290164,0.513554785824136,1.03936658382236,0.895133478337407,1.19208812868759,1.56254084375959,1.62458479892035,0.908698049533329,0.914481679859998,0.705783295957884,0.682205165178267,1.25075394132428,0.233753804363138,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.549454872801795,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,1.66059756134683,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,1.47074806760011,0.44449345560323,0.206035057238894,1.60459604795908,0.252697211763798,1.2673964994512,1.13175804831646,1.03005658216871,0.448176066834085,1.20614484806788,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,0.238436189947321,0.872078499793971,0.658765662907314,0.846146078916765,0.365855945745545,0,1.22223702461276,0.561142271657738,1.06771516311757,0.788035859004508,0.818462086339379,0.929621047115796,0.385813221962283,0.999242311751784,0.233931608445408,1.07435527024149,0.382576664137687,0.220591419119515,0.695603506861264
|short_description=p3@Spast
}}

Revision as of 08:13, 5 August 2015

Short description:p3@Spast
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Spast_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: -48bp_to_ENSMUST00000024869, NM_001162870, NM_016962, uc008dnz.2, uc008doa.2_5end
EntrezGene:50850
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Spast

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G541.15
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H310.39
testis, neonate N30.CNhs11130.1391-42E225.35
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.10e-1133
neuronal stem cell1.10e-1133
neuroblast1.10e-1133
electrically signaling cell1.10e-1133
CNS neuron (sensu Vertebrata)1.91e-0923
neuroblast (sensu Vertebrata)1.91e-0923
electrically responsive cell6.34e-0939
electrically active cell6.34e-0939
ectodermal cell4.70e-0844
neurectodermal cell4.70e-0844
neural cell1.53e-0743

Uber anatomy
Ontology termp-valuen
ectodermal placode3.38e-0913
ectoderm-derived structure7.68e-0895
ectoderm7.68e-0895
presumptive ectoderm7.68e-0895
ecto-epithelium5.07e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:74738246..74738278,%2B&oldid=3877823"