FFCP PHASE1:Mm9::chr17:74738040..74738089,+: Difference between revisions
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{{FFCP|EntrezGene=50850|HGNC=|MCL_coexpression_id=482|UniProt=Q9QYY8|association_with_transcript=-237bp_to_ENSMUST00000024869,NM_001162870,NM_016962,uc008dnz.2,uc008doa.2_5end|description=CAGE_peak_1_at_Spast_5end|id=chr17:74738040..74738089,+|ontology_enrichment_celltype=CL:0000117!7.33e-10!23;CL:0000337!7.33e-10!23;CL:0000540!4.92e-07!33;CL:0000047!4.92e-07!33;CL:0000031!4.92e-07!33;CL:0000404!4.92e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.32e-10,23;CL:0000337,7.32e-10,23;CL:0000540,4.92e-07,33;CL:0000047,4.92e-07,33;CL:0000031,4.92e-07,33;CL:0000404,4.92e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.39e-15!94;UBERON:0002020!1.28e-14!34;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0007811!4.35e-14!86;UBERON:0003056!2.60e-13!49;UBERON:0000955!4.44e-13!50;UBERON:0006238!4.44e-13!50;UBERON:0000033!4.96e-13!63;UBERON:0003080!9.06e-13!40;UBERON:0002791!1.20e-12!29;UBERON:0003528!1.20e-12!29;UBERON:0001893!1.20e-12!29;UBERON:0002616!1.46e-12!49;UBERON:0001017!1.86e-12!73;UBERON:0005743!1.86e-12!73;UBERON:0002780!2.72e-12!39;UBERON:0001890!2.72e-12!39;UBERON:0006240!2.72e-12!39;UBERON:0000073!3.05e-12!75;UBERON:0001016!3.05e-12!75;UBERON:0002346!8.31e-12!71;UBERON:0003075!8.31e-12!71;UBERON:0007284!8.31e-12!71;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0004121!3.57e-10!102;UBERON:0000924!3.57e-10!102;UBERON:0006601!3.57e-10!102;UBERON:0002619!7.39e-08!17;UBERON:0002021!5.88e-07!10;UBERON:0000411!5.88e-07!10;UBERON:0001950!5.88e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.30e-14,34;UBERON:0001049,1.44e-14,52;UBERON:0005068,1.44e-14,52;UBERON:0006241,1.44e-14,52;UBERON:0007135,1.44e-14,52;UBERON:0000073,1.51e-14,54;UBERON:0010371,3.37e-14,73;UBERON:0002346,3.60e-14,64;UBERON:0003075,3.60e-14,64;UBERON:0007284,3.60e-14,64;UBERON:0003056,2.63e-13,49;UBERON:0000955,5.43e-13,47;UBERON:0006238,5.43e-13,47;UBERON:0003080,9.15e-13,40;UBERON:0003528,1.22e-12,29;UBERON:0002791,1.22e-12,29;UBERON:0001893,1.22e-12,29;UBERON:0002616,1.80e-12,46;UBERON:0001017,1.87e-12,73;UBERON:0002780,2.75e-12,39;UBERON:0001890,2.75e-12,39;UBERON:0006240,2.75e-12,39;UBERON:0001016,3.08e-12,75;UBERON:0004121,9.41e-12,95;UBERON:0000924,9.41e-12,95;UBERON:0006601,9.41e-12,95;UBERON:0000956,2.99e-10,21;UBERON:0001869,2.99e-10,21;UBERON:0000203,2.99e-10,21;UBERON:0010314,3.18e-08,92;UBERON:0002619,7.48e-08,17;UBERON:0002021,5.88e-07,10;UBERON:0000411,5.88e-07,10;UBERON:0001950,5.88e-07,10|phase1_expression=17.6163731815273,1.39590163055744,1.81999695755814,1.81478526784098,3.00537437967808,3.52546471014969,3.27057696833736,3.74457637980571,5.06839399746,4.21316147379588,2.91070545983358,1.99430397488341,5.82082481766099,5.07038334030185,4.66353666541928,2.42970320867791,1.39912375625629,7.72882305127682,9.1866670515845,7.21462408056651,5.52781385981954,2.87943758482567,2.35079810225042,3.67982572424835,2.06468352960453,0.57423196411502,2.58457197695445,1.72376986148711,2.28028103347649,1.00812051903972,1.10865255327652,3.17515336729816,3.69038872550742,0,1.1554064790051,1.16364251750945,2.45003227514843,8.78916424547506,7.813353445238,7.32933241563318,4.70585190424811,11.6117732442936,8.73918635456076,2.01434908760924,2.93993100536592,3.85448179539531,6.25913075478431,2.8343270329458,0.659058548203415,4.27745777963423,5.17949760013841,1.43752564364972,10.9058693937529,6.5282592781021,9.41062637598899,3.60163210450326,5.15760191889762,2.57836046138721,27.1104057551861,24.8625760257855,19.0149421051854,3.38844532069132,0.889294796111139,3.5995988691256,3.9554654502679,3.5524005747305,2.39680088414724,3.07374644257244,34.2175720617976,34.9665380279079,26.5009451302741,11.1403883917483,12.589506834242,38.8295833511404,37.8589610522034,35.8495326777908,3.30347642998166,15.1947932321373,10.752457327937,26.6410301214992,32.5696011224578,38.0266760506435,6.70039197603314,8.4414391504752,8.40390362772456,10.9012576625257,19.0778052270798,20.3175395949578,6.6639050133202,6.04572480854284,2.31891590961342,5.16254326188832,0,2.15881276655127,0.649776417447669,0.448026887097336,3.5111105032938,3.06774580640504,3.63700406444016,1.06001872353102,9.85903938436764,3.84979432242953,7.64415719119937,7.11066703153331,0.865964164044856,0.760079596425296,0,2.2836775943812,1.29468941823586,2.82040064223167,5.20455980298408,5.1759131313064,5.99600292865752,4.52167921657868,5.87943535678524,2.76466500925286,4.44950941921873,1.01219549843938,3.5384422077995,7.117741397686,6.8460870722722,3.39412677194655,3.72783522436244,9.66176630138106,15.7085030110091,2.81002760729451,2.75574786363617,3.59941638596045,3.17675567682662,14.8292733010774,12.3525162761029,56.6701128029018,16.5133104182663,22.2472447877388,11.2205544062162,14.9261962022337,13.7483141197927,5.47390670684409,1.76905930903572,5.89237196482127,10.2795149940536,9.19608417733892,9.00310649026746,10.700042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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50850 | |||
|HGNC= | |||
|MCL_coexpression_id=482 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QYY8 | |||
|association_with_transcript=-237bp_to_ENSMUST00000024869,NM_001162870,NM_016962,uc008dnz.2,uc008doa.2_5end | |||
|cluster_id=chr17:74738040..74738089,+ | |||
|description=CAGE_peak_1_at_Spast_5end | |||
|id=chr17:74738040..74738089,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.33e-10!23;CL:0000337!7.33e-10!23;CL:0000540!4.92e-07!33;CL:0000047!4.92e-07!33;CL:0000031!4.92e-07!33;CL:0000404!4.92e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.32e-10,23;CL:0000337,7.32e-10,23;CL:0000540,4.92e-07,33;CL:0000047,4.92e-07,33;CL:0000031,4.92e-07,33;CL:0000404,4.92e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.39e-15!94;UBERON:0002020!1.28e-14!34;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0007811!4.35e-14!86;UBERON:0003056!2.60e-13!49;UBERON:0000955!4.44e-13!50;UBERON:0006238!4.44e-13!50;UBERON:0000033!4.96e-13!63;UBERON:0003080!9.06e-13!40;UBERON:0002791!1.20e-12!29;UBERON:0003528!1.20e-12!29;UBERON:0001893!1.20e-12!29;UBERON:0002616!1.46e-12!49;UBERON:0001017!1.86e-12!73;UBERON:0005743!1.86e-12!73;UBERON:0002780!2.72e-12!39;UBERON:0001890!2.72e-12!39;UBERON:0006240!2.72e-12!39;UBERON:0000073!3.05e-12!75;UBERON:0001016!3.05e-12!75;UBERON:0002346!8.31e-12!71;UBERON:0003075!8.31e-12!71;UBERON:0007284!8.31e-12!71;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0004121!3.57e-10!102;UBERON:0000924!3.57e-10!102;UBERON:0006601!3.57e-10!102;UBERON:0002619!7.39e-08!17;UBERON:0002021!5.88e-07!10;UBERON:0000411!5.88e-07!10;UBERON:0001950!5.88e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.30e-14,34;UBERON:0001049,1.44e-14,52;UBERON:0005068,1.44e-14,52;UBERON:0006241,1.44e-14,52;UBERON:0007135,1.44e-14,52;UBERON:0000073,1.51e-14,54;UBERON:0010371,3.37e-14,73;UBERON:0002346,3.60e-14,64;UBERON:0003075,3.60e-14,64;UBERON:0007284,3.60e-14,64;UBERON:0003056,2.63e-13,49;UBERON:0000955,5.43e-13,47;UBERON:0006238,5.43e-13,47;UBERON:0003080,9.15e-13,40;UBERON:0003528,1.22e-12,29;UBERON:0002791,1.22e-12,29;UBERON:0001893,1.22e-12,29;UBERON:0002616,1.80e-12,46;UBERON:0001017,1.87e-12,73;UBERON:0002780,2.75e-12,39;UBERON:0001890,2.75e-12,39;UBERON:0006240,2.75e-12,39;UBERON:0001016,3.08e-12,75;UBERON:0004121,9.41e-12,95;UBERON:0000924,9.41e-12,95;UBERON:0006601,9.41e-12,95;UBERON:0000956,2.99e-10,21;UBERON:0001869,2.99e-10,21;UBERON:0000203,2.99e-10,21;UBERON:0010314,3.18e-08,92;UBERON:0002619,7.48e-08,17;UBERON:0002021,5.88e-07,10;UBERON:0000411,5.88e-07,10;UBERON:0001950,5.88e-07,10 | |||
|phase1_expression=17.6163731815273,1.39590163055744,1.81999695755814,1.81478526784098,3.00537437967808,3.52546471014969,3.27057696833736,3.74457637980571,5.06839399746,4.21316147379588,2.91070545983358,1.99430397488341,5.82082481766099,5.07038334030185,4.66353666541928,2.42970320867791,1.39912375625629,7.72882305127682,9.1866670515845,7.21462408056651,5.52781385981954,2.87943758482567,2.35079810225042,3.67982572424835,2.06468352960453,0.57423196411502,2.58457197695445,1.72376986148711,2.28028103347649,1.00812051903972,1.10865255327652,3.17515336729816,3.69038872550742,0,1.1554064790051,1.16364251750945,2.45003227514843,8.78916424547506,7.813353445238,7.32933241563318,4.70585190424811,11.6117732442936,8.73918635456076,2.01434908760924,2.93993100536592,3.85448179539531,6.25913075478431,2.8343270329458,0.659058548203415,4.27745777963423,5.17949760013841,1.43752564364972,10.9058693937529,6.5282592781021,9.41062637598899,3.60163210450326,5.15760191889762,2.57836046138721,27.1104057551861,24.8625760257855,19.0149421051854,3.38844532069132,0.889294796111139,3.5995988691256,3.9554654502679,3.5524005747305,2.39680088414724,3.07374644257244,34.2175720617976,34.9665380279079,26.5009451302741,11.1403883917483,12.589506834242,38.8295833511404,37.8589610522034,35.8495326777908,3.30347642998166,15.1947932321373,10.752457327937,26.6410301214992,32.5696011224578,38.0266760506435,6.70039197603314,8.4414391504752,8.40390362772456,10.9012576625257,19.0778052270798,20.3175395949578,6.6639050133202,6.04572480854284,2.31891590961342,5.16254326188832,0,2.15881276655127,0.649776417447669,0.448026887097336,3.5111105032938,3.06774580640504,3.63700406444016,1.06001872353102,9.85903938436764,3.84979432242953,7.64415719119937,7.11066703153331,0.865964164044856,0.760079596425296,0,2.2836775943812,1.29468941823586,2.82040064223167,5.20455980298408,5.1759131313064,5.99600292865752,4.52167921657868,5.87943535678524,2.76466500925286,4.44950941921873,1.01219549843938,3.5384422077995,7.117741397686,6.8460870722722,3.39412677194655,3.72783522436244,9.66176630138106,15.7085030110091,2.81002760729451,2.75574786363617,3.59941638596045,3.17675567682662,14.8292733010774,12.3525162761029,56.6701128029018,16.5133104182663,22.2472447877388,11.2205544062162,14.9261962022337,13.7483141197927,5.47390670684409,1.76905930903572,5.89237196482127,10.2795149940536,9.19608417733892,9.00310649026746,10.7000420663358,9.66118287948856,8.71173297936978,13.6804517857204,6.20888089773638,10.7783996466421,15.3175924935934,16.5394056714112,13.8093311429372,10.8438427197983,10.0993128291428,8.64284972913362,12.7381930763836,2.1066395619397,3.60287069960601,2.84163499395593,5.79952163099405,5.15957331958412,6.66229627405755,5.44512891845984,5.70616272067471,5.24508183817086,6.74348439776183,4.82892122519315,5.83826711835847,5.26591519723137,3.61168420974009,3.64809642956351,4.67839959761063,5.26920276698522,2.95254121272818,16.4026159880019,48.2622632058844,1.98251269790279,2.3800550999719,10.6644125267617,11.6118335930219,6.82997545007095,5.24377164020691,4.89231696458715,3.61428689613862,1.89811624617805,5.10566759644434,6.28338022000674,6.96347652144028,4.48417400373976,4.49409704327111,1.72910439899755,3.38540164532424,4.93136542478012,6.51216521875454,7.88954149711563,7.94240178596726,6.59438456369928,6.66290288958026,5.75452487830741,2.36176236767363,3.92496819603437,1.23397163921801,1.48226313543574,3.17005700860579,3.53806191203765,3.37293168577281,3.44862206360455,1.92941727801933,3.05551022137704,1.72617682470486,4.70192157647603,1.92192989231657,15.814502718009,3.72140947668503,2.18426371180192,2.02063102357689,1.4351793081753,1.92977408545347,3.51031061316549,8.33762211790133,7.49638891633319,7.1292936025579,7.97946844180907,7.53778158488171,8.80761471278251,6.82967767502296,9.30047350226527,7.9727288273559,10.2051051940792,4.58817281204066,5.00786447411097,3.90552458170081,3.01582567878545,1.08781136763742,1.47529281905711,1.65562047782839,7.70642831941401,10.5490517932983,8.6885521049638,7.57412781613119,4.73262329124385,2.73307121007647,7.53981892064796,6.69112634267146,6.46116154838943,9.34152551603147,2.83367491172426,3.50707029493574,5.53402889125133,16.708708453934,5.96148357874728,12.2865266530406,14.1711654637611,6.59880491890142,1.32745138339963,10.4395673546642,4.83717691143602,3.58349651536206,4.13422650033082,6.7635732547664,5.94385074286909,5.45300594216258,1.78248689192361,4.10847785316561,1.05418608574999,4.12542172992747,2.38307724027652,11.1637878299412,8.14959707831353,8.78781843629528,10.1083933176096,9.27517851530767,9.87294123612726,4.87143918583359,3.28540391289194,6.99045833850607,0.661585194164886,7.74965388824956,10.6566521619298,9.16756458907969,11.340372680298,11.6540038818993,3.20628920292836,9.45669040253599,3.2465467351592,10.1129565301979,4.44466865687308,4.70921142511728,2.59719032669948,5.0331198105435,4.9293744698218,2.09927178485487,5.38979897837253,1.90934123603023,11.5462637657114,8.13277868507395,6.58832579012988,5.6453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| |||
|short_description=p1@Spast | |||
}} |
Revision as of 08:13, 5 August 2015
Short description: | p1@Spast |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spast_5end |
Coexpression cluster: | MCL_coexpression_mm9:482 |
Association with transcript: | -237bp_to_ENSMUST00000024869, NM_001162870, NM_016962, uc008dnz.2, uc008doa.2_5end |
EntrezGene: | 50850 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.32e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.32e-10 | 23 |
neuron | 4.92e-07 | 33 |
neuronal stem cell | 4.92e-07 | 33 |
neuroblast | 4.92e-07 | 33 |
electrically signaling cell | 4.92e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.30e-14 | 34 |
neural tube | 1.44e-14 | 52 |
neural rod | 1.44e-14 | 52 |
future spinal cord | 1.44e-14 | 52 |
neural keel | 1.44e-14 | 52 |
regional part of nervous system | 1.51e-14 | 54 |
ecto-epithelium | 3.37e-14 | 73 |
neurectoderm | 3.60e-14 | 64 |
neural plate | 3.60e-14 | 64 |
presumptive neural plate | 3.60e-14 | 64 |
pre-chordal neural plate | 2.63e-13 | 49 |
brain | 5.43e-13 | 47 |
future brain | 5.43e-13 | 47 |
anterior neural tube | 9.15e-13 | 40 |
brain grey matter | 1.22e-12 | 29 |
regional part of telencephalon | 1.22e-12 | 29 |
telencephalon | 1.22e-12 | 29 |
regional part of brain | 1.80e-12 | 46 |
central nervous system | 1.87e-12 | 73 |
regional part of forebrain | 2.75e-12 | 39 |
forebrain | 2.75e-12 | 39 |
future forebrain | 2.75e-12 | 39 |
nervous system | 3.08e-12 | 75 |
ectoderm-derived structure | 9.41e-12 | 95 |
ectoderm | 9.41e-12 | 95 |
presumptive ectoderm | 9.41e-12 | 95 |
cerebral cortex | 2.99e-10 | 21 |
cerebral hemisphere | 2.99e-10 | 21 |
pallium | 2.99e-10 | 21 |
structure with developmental contribution from neural crest | 3.18e-08 | 92 |
regional part of cerebral cortex | 7.48e-08 | 17 |
occipital lobe | 5.88e-07 | 10 |
visual cortex | 5.88e-07 | 10 |
neocortex | 5.88e-07 | 10 |