FFCP PHASE1:Mm9::chr17:29227828..29227839,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=230|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:29227828..29227839,-|id=chr17:29227828..29227839,-|ontology_enrichment_celltype=CL:0000107!1.11e-07!9;CL:0000192!1.85e-07!3;CL:0000359!1.85e-07!3;CL:0002539!1.85e-07!3;CL:0000514!1.85e-07!3|ontology_enrichment_celltype_v019_2=CL:0000192,4.90e-53,3;CL:0000359,4.90e-53,3;CL:0002539,4.90e-53,3;CL:0000514,4.90e-53,3;CL:0000680,4.62e-27,6;CL:0000187,4.62e-27,6;CL:0000056,4.62e-27,6;CL:0000222,2.44e-23,7;CL:0000355,2.30e-18,9;CL:0000393,8.01e-08,39;CL:0000211,8.01e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000947!1.54e-08!4;UBERON:0001637!1.54e-08!4;UBERON:0003509!1.54e-08!4;UBERON:0004573!1.54e-08!4;UBERON:0004571!1.54e-08!4;UBERON:0010191!1.54e-08!4;UBERON:0004572!1.54e-08!4;UBERON:0002410!1.11e-07!9;UBERON:0001135!1.85e-07!3;UBERON:0004237!1.85e-07!3;UBERON:0004695!1.85e-07!3;UBERON:0002111!1.85e-07!3;UBERON:0004178!1.85e-07!3;UBERON:0004535!2.84e-07!23;UBERON:0001009!2.84e-07!23;UBERON:0000055!8.57e-07!5;UBERON:0001981!8.57e-07!5;UBERON:0002049!8.57e-07!5;UBERON:0007500!8.57e-07!5;UBERON:0007798!8.57e-07!5;UBERON:0004537!8.57e-07!5;UBERON:0006965!8.57e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.90e-53,3;UBERON:0004237,4.90e-53,3;UBERON:0004695,4.90e-53,3;UBERON:0002111,4.90e-53,3;UBERON:0004178,4.90e-53,3;UBERON:0000947,4.62e-40,4;UBERON:0001637,4.62e-40,4;UBERON:0004573,4.62e-40,4;UBERON:0003509,4.62e-40,4;UBERON:0004571,4.62e-40,4;UBERON:0010191,4.62e-40,4;UBERON:0004572,4.62e-40,4;UBERON:0000055,2.89e-32,5;UBERON:0007500,2.89e-32,5;UBERON:0001981,2.89e-32,5;UBERON:0002049,2.89e-32,5;UBERON:0007798,2.89e-32,5;UBERON:0004537,2.89e-32,5;UBERON:0006965,2.89e-32,5;UBERON:0001134,2.30e-18,9;UBERON:0002036,2.30e-18,9;UBERON:0002385,2.30e-18,9;UBERON:0000486,2.30e-18,9;UBERON:0007503,2.30e-18,9;UBERON:0001015,2.30e-18,9;UBERON:0002329,2.30e-18,9;UBERON:0003082,2.30e-18,9;UBERON:0003059,2.30e-18,9;UBERON:0007282,2.30e-18,9;UBERON:0004290,2.30e-18,9;UBERON:0009618,2.30e-18,9;UBERON:0000383,1.28e-16,10;UBERON:0007524,3.43e-15,11;UBERON:0003077,3.43e-15,11;UBERON:0007285,3.43e-15,11;UBERON:0004535,1.12e-07,23;UBERON:0001009,1.12e-07,23;UBERON:0010313,5.46e-07,3;UBERON:0002342,5.46e-07,3;UBERON:0002005,5.46e-07,3;UBERON:0005428,5.46e-07,3;UBERON:0005062,5.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297872853602656,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,2.7697299954627,2.02753862439029,2.38610777810186,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,1.17131623288992,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0.876767573733936,0,0,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.8244312647074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0.269141569828427,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr17:29227828..29227839,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:29227828..29227839,- | |||
|description=CAGE_peak_at_chr17:29227828..29227839,- | |||
|id=chr17:29227828..29227839,- | |||
|ontology_enrichment_celltype=CL:0000107!1.11e-07!9;CL:0000192!1.85e-07!3;CL:0000359!1.85e-07!3;CL:0002539!1.85e-07!3;CL:0000514!1.85e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.90e-53,3;CL:0000359,4.90e-53,3;CL:0002539,4.90e-53,3;CL:0000514,4.90e-53,3;CL:0000680,4.62e-27,6;CL:0000187,4.62e-27,6;CL:0000056,4.62e-27,6;CL:0000222,2.44e-23,7;CL:0000355,2.30e-18,9;CL:0000393,8.01e-08,39;CL:0000211,8.01e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!1.54e-08!4;UBERON:0001637!1.54e-08!4;UBERON:0003509!1.54e-08!4;UBERON:0004573!1.54e-08!4;UBERON:0004571!1.54e-08!4;UBERON:0010191!1.54e-08!4;UBERON:0004572!1.54e-08!4;UBERON:0002410!1.11e-07!9;UBERON:0001135!1.85e-07!3;UBERON:0004237!1.85e-07!3;UBERON:0004695!1.85e-07!3;UBERON:0002111!1.85e-07!3;UBERON:0004178!1.85e-07!3;UBERON:0004535!2.84e-07!23;UBERON:0001009!2.84e-07!23;UBERON:0000055!8.57e-07!5;UBERON:0001981!8.57e-07!5;UBERON:0002049!8.57e-07!5;UBERON:0007500!8.57e-07!5;UBERON:0007798!8.57e-07!5;UBERON:0004537!8.57e-07!5;UBERON:0006965!8.57e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.90e-53,3;UBERON:0004237,4.90e-53,3;UBERON:0004695,4.90e-53,3;UBERON:0002111,4.90e-53,3;UBERON:0004178,4.90e-53,3;UBERON:0000947,4.62e-40,4;UBERON:0001637,4.62e-40,4;UBERON:0004573,4.62e-40,4;UBERON:0003509,4.62e-40,4;UBERON:0004571,4.62e-40,4;UBERON:0010191,4.62e-40,4;UBERON:0004572,4.62e-40,4;UBERON:0000055,2.89e-32,5;UBERON:0007500,2.89e-32,5;UBERON:0001981,2.89e-32,5;UBERON:0002049,2.89e-32,5;UBERON:0007798,2.89e-32,5;UBERON:0004537,2.89e-32,5;UBERON:0006965,2.89e-32,5;UBERON:0001134,2.30e-18,9;UBERON:0002036,2.30e-18,9;UBERON:0002385,2.30e-18,9;UBERON:0000486,2.30e-18,9;UBERON:0007503,2.30e-18,9;UBERON:0001015,2.30e-18,9;UBERON:0002329,2.30e-18,9;UBERON:0003082,2.30e-18,9;UBERON:0003059,2.30e-18,9;UBERON:0007282,2.30e-18,9;UBERON:0004290,2.30e-18,9;UBERON:0009618,2.30e-18,9;UBERON:0000383,1.28e-16,10;UBERON:0007524,3.43e-15,11;UBERON:0003077,3.43e-15,11;UBERON:0007285,3.43e-15,11;UBERON:0004535,1.12e-07,23;UBERON:0001009,1.12e-07,23;UBERON:0010313,5.46e-07,3;UBERON:0002342,5.46e-07,3;UBERON:0002005,5.46e-07,3;UBERON:0005428,5.46e-07,3;UBERON:0005062,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297872853602656,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,2.7697299954627,2.02753862439029,2.38610777810186,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,1.17131623288992,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0.876767573733936,0,0,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.8244312647074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0.269141569828427,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr17:29227828..29227839,- | |||
}} |
Latest revision as of 13:36, 4 August 2015
Short description: | p@chr17:29227828..29227839, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:29227828..29227839, - |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.90e-53 | 3 |
vascular associated smooth muscle cell | 4.90e-53 | 3 |
aortic smooth muscle cell | 4.90e-53 | 3 |
smooth muscle myoblast | 4.90e-53 | 3 |
muscle precursor cell | 4.62e-27 | 6 |
muscle cell | 4.62e-27 | 6 |
myoblast | 4.62e-27 | 6 |
mesodermal cell | 2.44e-23 | 7 |
multi-potent skeletal muscle stem cell | 2.30e-18 | 9 |
electrically responsive cell | 8.01e-08 | 39 |
electrically active cell | 8.01e-08 | 39 |