FFCP PHASE1:Hg19::chr5:145439397..145439432,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26299 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_uc011dbo.1_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_SH3RF2_5end | |||
|id=chr5:145439397..145439432,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.51e-24;4!UBERON:0007284;1.51e-24;4!UBERON:0010226;2.93e-12;1!UBERON:0010227;3.65e-12;1!UBERON:0004140;4.06e-12;1!UBERON:0000358;6.26e-12;1!UBERON:0006603;8.93e-08;65!UBERON:0004872;6.11e-07;7 | |||
|ontology_enrichment_disease=DOID:114!6.48e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.56e-22;2!DOID:178;5.05e-12;1!DOID:326;5.05e-12;1!DOID:3978;5.05e-12;1!DOID:3394;5.05e-12;1!DOID:5844;5.05e-12;1!DOID:1287;1.19e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.56e-22,2;DOID:178,5.05e-12,1;DOID:326,5.05e-12,1;DOID:3978,5.05e-12,1;DOID:3394,5.05e-12,1;DOID:5844,5.05e-12,1;DOID:1287,1.19e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.77e-15!115;UBERON:0004151!4.34e-11!3;UBERON:0003978!5.11e-11!3;UBERON:0009751!5.11e-11!3;UBERON:0000946!5.11e-11!3;UBERON:0002523!5.11e-11!3;UBERON:0005983!5.11e-11!3;UBERON:0002165!5.11e-11!3;UBERON:0002062!5.11e-11!3;UBERON:0007280!5.11e-11!3;UBERON:0007100!1.20e-08!27;UBERON:0002081!6.69e-08!2;UBERON:0002133!7.63e-08!2;UBERON:0000341!2.66e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.67e-33;25!UBERON:0004151;1.02e-32;3!UBERON:0003978;1.75e-32;3!UBERON:0000946;1.75e-32;3!UBERON:0002081;2.85e-22;2!UBERON:0002133;4.37e-22;2!UBERON:0000948;3.66e-17;22!UBERON:0002084;2.93e-12;1!UBERON:0002082;2.93e-12;1!UBERON:0002146;3.27e-12;1!UBERON:0005623;3.27e-12;1!UBERON:0002079;3.65e-12;1!UBERON:0002135;5.62e-12;1!UBERON:0002134;6.97e-12;1!UBERON:0005208;6.97e-12;1!UBERON:0004145;6.97e-12;1!UBERON:0005946;6.97e-12;1!UBERON:0005965;6.97e-12;1!UBERON:0002078;6.97e-12;1!UBERON:0007029;7.76e-12;1!UBERON:0010313;3.52e-10;10!UBERON:0003103;1.19e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.02e-32,3;UBERON:0003978,1.75e-32,3;UBERON:0009751,1.75e-32,3;UBERON:0000946,1.75e-32,3;UBERON:0002523,1.75e-32,3;UBERON:0005983,1.75e-32,3;UBERON:0002165,1.75e-32,3;UBERON:0002062,1.75e-32,3;UBERON:0007280,1.75e-32,3;UBERON:0007100,6.04e-31,27;UBERON:0002081,2.85e-22,2;UBERON:0010227,2.85e-22,2;UBERON:0002133,4.37e-22,2;UBERON:0000948,1.05e-15,24;UBERON:0005498,1.05e-15,24;UBERON:0004140,1.05e-15,24;UBERON:0009881,1.05e-15,24;UBERON:0004141,1.05e-15,24;UBERON:0003084,1.05e-15,24;UBERON:0007005,1.05e-15,24;UBERON:0004139,1.05e-15,24;UBERON:0004291,1.05e-15,24;UBERON:0003103,2.50e-14,68;UBERON:0004797,2.65e-14,7;UBERON:0002084,2.93e-12,1;UBERON:0002082,2.93e-12,1;UBERON:0010226,2.93e-12,1;UBERON:0002146,3.27e-12,1;UBERON:0005623,3.27e-12,1;UBERON:0002079,3.65e-12,1;UBERON:0002135,5.62e-12,1;UBERON:0002134,6.97e-12,1;UBERON:0005208,6.97e-12,1;UBERON:0005946,6.97e-12,1;UBERON:0005965,6.97e-12,1;UBERON:0002078,6.97e-12,1;UBERON:0007029,7.76e-12,1;UBERON:0010313,3.52e-10,10;UBERON:0002342,3.52e-10,10;UBERON:0005062,3.52e-10,10;UBERON:0001009,3.84e-08,112;UBERON:0007023,6.26e-08,114 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784250137270958,1.1747511088309,0.189753732724185,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,120.929279750886,457.404206327321,43.7902544991857,147.363102368255,387.161895419187,651.437484272826,428.227453630393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.104909176269996,0,0,0,432.390672455887,557.481439047693,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,8.11870101936739,9.71421986118279,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.437119121007915,0,0,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,1.1903221573187,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,3.99192427855216,0,0,0,0,61.0066450248981,0.122241444182866,0,0,2.61655931668334,0 | |||
|short_description=p2@SH3RF2 | |||
}} |
Revision as of 08:05, 22 January 2014
Short description: | p2@SH3RF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SH3RF2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 45bp_to_uc011dbo.1_5end |
EntrezGene: | SH3RF2 |
HGNC: | 26299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.56e-22 | 2 |
vascular disease | 5.05e-12 | 1 |
ischemia | 5.05e-12 | 1 |
extrinsic cardiomyopathy | 5.05e-12 | 1 |
myocardial ischemia | 5.05e-12 | 1 |
myocardial infarction | 5.05e-12 | 1 |
cardiovascular system disease | 1.19e-11 | 4 |