FFCP PHASE1:Mm9::chr17:24844562..24844606,-: Difference between revisions
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{{FFCP|EntrezGene=213773|HGNC=|MCL_coexpression_id=301|UniProt=Q8C4J7,Q8CE86|association_with_transcript=0bp_to_ENSMUST00000046534,ENSMUST00000126319,ENSMUST00000167702,NM_145396,uc008axv.1,uc012amp.1_5end|description=CAGE_peak_1_at_Tbl3_5end|id=chr17:24844562..24844606,-|ontology_enrichment_celltype=CL:0000034!6.54e-18!97;CL:0000723!2.06e-17!91;CL:0000048!2.06e-17!91;CL:0000548!4.08e-17!115;CL:0000004!4.08e-17!115;CL:0000255!4.08e-17!115;CL:0002371!3.57e-15!118;CL:0000144!1.10e-14!121;CL:0000012!1.10e-14!121;CL:0000219!1.96e-14!54;CL:0002319!8.93e-13!43;CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0000055!1.71e-11!50;CL:0002320!1.94e-11!46;CL:0000134!1.94e-11!46;CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000988!5.80e-09!32;CL:0002032!5.80e-09!32;CL:0000037!5.80e-09!32;CL:0000566!5.80e-09!32;CL:0000837!5.80e-09!32;CL:0000393!6.32e-08!39;CL:0000211!6.32e-08!39;CL:0002321!1.74e-07!70;CL:0000220!1.74e-07!70;CL:0000049!3.46e-07!19|ontology_enrichment_celltype_v019_2=CL:0000034,6.54e-18,97;CL:0000723,2.06e-17,91;CL:0000048,2.06e-17,91;CL:0000219,1.96e-14,54;CL:0002319,8.93e-13,43;CL:0000221,2.30e-12,44;CL:0000133,2.30e-12,44;CL:0002320,1.94e-11,46;CL:0000134,1.94e-11,46;CL:0000117,9.50e-10,23;CL:0000337,9.50e-10,23;CL:0000540,5.22e-09,33;CL:0000047,5.22e-09,33;CL:0000031,5.22e-09,33;CL:0000404,5.22e-09,33;CL:0000988,5.80e-09,32;CL:0002032,5.80e-09,32;CL:0000037,5.80e-09,32;CL:0000837,5.80e-09,32;CL:0000393,6.32e-08,39;CL:0000211,6.32e-08,39;CL:0002321,1.74e-07,70;CL:0000049,3.46e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.56e-12!75;UBERON:0001016!7.56e-12!75;UBERON:0001017!9.84e-12!73;UBERON:0005743!9.84e-12!73;UBERON:0002384!1.94e-11!46;UBERON:0002020!1.08e-09!34;UBERON:0002791!3.88e-08!29;UBERON:0003528!3.88e-08!29;UBERON:0001893!3.88e-08!29;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0002616!1.81e-07!49;UBERON:0000955!2.66e-07!50;UBERON:0006238!2.66e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.56e-12,75;UBERON:0001017,9.84e-12,73;UBERON:0002384,1.94e-11,46;UBERON:0002020,1.08e-09,34;UBERON:0000073,6.37e-09,54;UBERON:0004121,1.91e-08,95;UBERON:0000924,1.91e-08,95;UBERON:0006601,1.91e-08,95;UBERON:0003528,3.88e-08,29;UBERON:0002791,3.88e-08,29;UBERON:0001893,3.88e-08,29;UBERON:0001049,4.00e-08,52;UBERON:0005068,4.00e-08,52;UBERON:0006241,4.00e-08,52;UBERON:0007135,4.00e-08,52;UBERON:0002346,4.57e-07,64;UBERON:0003075,4.57e-07,64;UBERON:0007284,4.57e-07,64;UBERON:0002616,5.42e-07,46;UBERON:0000955,7.92e-07,47;UBERON:0006238,7.92e-07,47|phase1_expression=14.8938427807458,5.93258192986914,3.63999391511629,9.37639055051173,4.50806156951712,8.05820505177071,11.6806320297763,11.6210991097419,29.8472090961533,36.514066106231,79.1027013201833,69.5613226439334,13.5248576645653,14.0746847894586,21.9852442798337,19.8425762042029,26.5833513688696,18.7699988388151,15.4939309974485,18.2487550273153,14.7975324862861,20.2553540449806,33.1723732206448,16.7992043933077,12.8469197397615,6.31655160526522,6.46142994238612,7.75696437669201,15.2018735565099,11.3413558391969,13.5255611499736,68.5833127336402,79.3433575984096,79.2408405077194,16.1756907060714,21.942973187321,16.7418872135143,3.34825304589526,2.3440060335714,12.5645698553712,2.94115744015507,4.09827290975067,5.82612423637384,17.6255545165808,16.0175551326833,21.1078764985934,28.9484797408774,34.665999864491,24.3851662835264,27.8034755676225,29.6771213845769,46.0008205967909,22.1473039996212,17.4086914082723,19.8295341494054,16.7218633423366,13.7536051170603,12.3761302146586,25.0872411465901,33.8554226734101,32.9592329823213,30.834852418291,40.9075606211124,25.6471419425199,30.6548572395762,44.7602472416043,25.4660093940644,28.8163728991166,26.5445407509703,34.5615202129128,29.2351696278421,27.9937964715728,27.6085676189517,30.6226998037385,32.9708420302733,37.6879702510109,17.6185409599022,22.7283461791634,19.8152427900554,27.5642341356105,28.1781942295422,23.962015045611,22.0554569211091,24.7615548413939,19.8637722109853,23.2756582524197,19.2201769078789,21.8087351615602,23.020762773288,15.1898835814639,11.8844440367688,17.2084775396277,17.6792546764015,24.2866436237018,22.7421746106684,16.5769948226014,14.6062196937022,16.3613109674935,19.2241643406123,20.8470348961101,14.7885590765515,17.9657068380045,10.1922095882658,7.11066703153331,31.391200946626,29.8964641260616,37.408808931094,8.90634261808668,11.1343289968284,16.0317510190011,22.9000631331299,19.485790611977,15.912469310668,13.4143150091834,9.7598626922635,11.6869929936598,11.3709685157812,12.8693427658721,15.9229899350977,11.3236794963186,8.39197770149496,8.727754556434,14.9113408974498,12.8823550685081,14.4518227701284,17.8819938646014,22.7648736561249,37.1939693215913,21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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:213773 | |||
|HGNC= | |||
|MCL_coexpression_id=301 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C4J7,uniprot:Q8CE86 | |||
|association_with_transcript=0bp_to_ENSMUST00000046534,ENSMUST00000126319,ENSMUST00000167702,NM_145396,uc008axv.1,uc012amp.1_5end | |||
|cluster_id=chr17:24844562..24844606,- | |||
|description=CAGE_peak_1_at_Tbl3_5end | |||
|id=chr17:24844562..24844606,- | |||
|ontology_enrichment_celltype=CL:0000034!6.54e-18!97;CL:0000723!2.06e-17!91;CL:0000048!2.06e-17!91;CL:0000548!4.08e-17!115;CL:0000004!4.08e-17!115;CL:0000255!4.08e-17!115;CL:0002371!3.57e-15!118;CL:0000144!1.10e-14!121;CL:0000012!1.10e-14!121;CL:0000219!1.96e-14!54;CL:0002319!8.93e-13!43;CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0000055!1.71e-11!50;CL:0002320!1.94e-11!46;CL:0000134!1.94e-11!46;CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000988!5.80e-09!32;CL:0002032!5.80e-09!32;CL:0000037!5.80e-09!32;CL:0000566!5.80e-09!32;CL:0000837!5.80e-09!32;CL:0000393!6.32e-08!39;CL:0000211!6.32e-08!39;CL:0002321!1.74e-07!70;CL:0000220!1.74e-07!70;CL:0000049!3.46e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.54e-18,97;CL:0000723,2.06e-17,91;CL:0000048,2.06e-17,91;CL:0000219,1.96e-14,54;CL:0002319,8.93e-13,43;CL:0000221,2.30e-12,44;CL:0000133,2.30e-12,44;CL:0002320,1.94e-11,46;CL:0000134,1.94e-11,46;CL:0000117,9.50e-10,23;CL:0000337,9.50e-10,23;CL:0000540,5.22e-09,33;CL:0000047,5.22e-09,33;CL:0000031,5.22e-09,33;CL:0000404,5.22e-09,33;CL:0000988,5.80e-09,32;CL:0002032,5.80e-09,32;CL:0000037,5.80e-09,32;CL:0000837,5.80e-09,32;CL:0000393,6.32e-08,39;CL:0000211,6.32e-08,39;CL:0002321,1.74e-07,70;CL:0000049,3.46e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.56e-12!75;UBERON:0001016!7.56e-12!75;UBERON:0001017!9.84e-12!73;UBERON:0005743!9.84e-12!73;UBERON:0002384!1.94e-11!46;UBERON:0002020!1.08e-09!34;UBERON:0002791!3.88e-08!29;UBERON:0003528!3.88e-08!29;UBERON:0001893!3.88e-08!29;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0002616!1.81e-07!49;UBERON:0000955!2.66e-07!50;UBERON:0006238!2.66e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.56e-12,75;UBERON:0001017,9.84e-12,73;UBERON:0002384,1.94e-11,46;UBERON:0002020,1.08e-09,34;UBERON:0000073,6.37e-09,54;UBERON:0004121,1.91e-08,95;UBERON:0000924,1.91e-08,95;UBERON:0006601,1.91e-08,95;UBERON:0003528,3.88e-08,29;UBERON:0002791,3.88e-08,29;UBERON:0001893,3.88e-08,29;UBERON:0001049,4.00e-08,52;UBERON:0005068,4.00e-08,52;UBERON:0006241,4.00e-08,52;UBERON:0007135,4.00e-08,52;UBERON:0002346,4.57e-07,64;UBERON:0003075,4.57e-07,64;UBERON:0007284,4.57e-07,64;UBERON:0002616,5.42e-07,46;UBERON:0000955,7.92e-07,47;UBERON:0006238,7.92e-07,47 | |||
|phase1_expression=14.8938427807458,5.93258192986914,3.63999391511629,9.37639055051173,4.50806156951712,8.05820505177071,11.6806320297763,11.6210991097419,29.8472090961533,36.514066106231,79.1027013201833,69.5613226439334,13.5248576645653,14.0746847894586,21.9852442798337,19.8425762042029,26.5833513688696,18.7699988388151,15.4939309974485,18.2487550273153,14.7975324862861,20.2553540449806,33.1723732206448,16.7992043933077,12.8469197397615,6.31655160526522,6.46142994238612,7.75696437669201,15.2018735565099,11.3413558391969,13.5255611499736,68.5833127336402,79.3433575984096,79.2408405077194,16.1756907060714,21.942973187321,16.7418872135143,3.34825304589526,2.3440060335714,12.5645698553712,2.94115744015507,4.09827290975067,5.82612423637384,17.6255545165808,16.0175551326833,21.1078764985934,28.9484797408774,34.665999864491,24.3851662835264,27.8034755676225,29.6771213845769,46.0008205967909,22.1473039996212,17.4086914082723,19.8295341494054,16.7218633423366,13.7536051170603,12.3761302146586,25.0872411465901,33.8554226734101,32.9592329823213,30.834852418291,40.9075606211124,25.6471419425199,30.6548572395762,44.7602472416043,25.4660093940644,28.8163728991166,26.5445407509703,34.5615202129128,29.2351696278421,27.9937964715728,27.6085676189517,30.6226998037385,32.9708420302733,37.6879702510109,17.6185409599022,22.7283461791634,19.8152427900554,27.5642341356105,28.1781942295422,23.962015045611,22.0554569211091,24.7615548413939,19.8637722109853,23.2756582524197,19.2201769078789,21.8087351615602,23.020762773288,15.1898835814639,11.8844440367688,17.2084775396277,17.6792546764015,24.2866436237018,22.7421746106684,16.5769948226014,14.6062196937022,16.3613109674935,19.2241643406123,20.8470348961101,14.7885590765515,17.9657068380045,10.1922095882658,7.11066703153331,31.391200946626,29.8964641260616,37.408808931094,8.90634261808668,11.1343289968284,16.0317510190011,22.9000631331299,19.485790611977,15.912469310668,13.4143150091834,9.7598626922635,11.6869929936598,11.3709685157812,12.8693427658721,15.9229899350977,11.3236794963186,8.39197770149496,8.727754556434,14.9113408974498,12.8823550685081,14.4518227701284,17.8819938646014,22.7648736561249,37.1939693215913,21.7290088294941,17.5255048103643,16.9275223042892,18.0942267042525,16.8609590586508,13.8086346958378,15.7918913865266,15.5751612545047,13.4427960282417,11.0722203842983,14.4051972307195,11.1534183619831,20.9493913169953,20.921091503446,14.945156773844,15.0704817835715,13.7433728285682,16.0142150356062,14.6174690313177,10.8655415710387,36.2154228127175,20.9907748986279,19.1786725338704,21.4811817779023,12.5121262151519,8.70630416305416,9.87754254758129,18.1121182804829,34.4084461783485,38.0874902529778,27.2796959419769,17.6056906655177,11.9608290590359,15.3052752241863,15.1516630774535,9.24791889212798,10.4901636763417,13.2544348507732,9.65784245038629,10.8591768401468,11.8483091937706,9.52171291658752,8.10688095458557,14.0351987928319,14.4903076092093,10.3338942445486,20.6084149592845,17.5966887168576,10.9038198384653,18.7759902331116,25.5945900642281,21.5980104830208,17.0105048945163,19.5633018884642,16.0112191568307,12.7451169495415,13.2868137232463,16.4698954724011,14.5774421104156,12.5342577385925,11.6978452271472,18.8752075817387,14.9135254413539,13.3424653080426,25.605166628666,20.5647322697512,15.7790829942313,13.2373363099454,14.7403890247396,11.9932252012445,10.560501699751,11.513591542409,13.3448918665169,13.5736880313981,15.1190839814446,24.5262305402658,25.15955137449,19.7878658898671,17.0402501966342,17.364755502174,16.8053062175737,13.5217184601881,13.619359049103,14.8263163121564,7.18841032636773,14.8856379067401,14.3537329632698,17.1753637004036,14.7105879087968,15.4381926836277,9.05290631816363,28.0447289420317,25.7484662778401,16.6350184059684,15.2548661387526,18.0906758037161,13.5684875305028,11.9031525193257,7.72412206120336,12.6234873099802,12.756381492599,11.3065687153859,12.6060036762104,13.8863096238251,19.6028669121054,17.4049818821987,21.1458637398186,19.0396354950265,23.922037908181,16.8784828692773,18.8525187183177,16.6630811954886,20.1925260426404,22.2550084249084,18.0955654095551,20.0733790280144,17.8238939265915,15.5692091933858,19.4309136803949,16.9508397588561,14.2303600060748,15.4234231882467,12.3487874131194,18.8749539887291,13.845391545054,13.0326397148303,11.9470624505967,27.4342118855129,23.5812374432506,16.2200368590072,19.1946230372502,21.213025208131,15.247269296925,14.5413491791002,16.0423820273125,13.2735438333043,18.9753495434998,12.3762651897824,14.6389030474129,15.8453762747553,22.2496936106338,18.8616590827801,17.0246624296583,14.0911365905636,12.176627524557,17.3545020995322,13.6109590676952,7.62595455109753,16.3191014560672,9.56340267060584,9.52640117505843,10.8563264870681,18.1445962884767,17.2347944732314,16.9058885245313,14.2777482548092,16.9162171989874,15.6854019652049,16.4823129359043,20.5321618135113,13.8061169998235,16.0144721244566,16.1479508494163,12.8755336137765,16.307596908922,23.8667654503778,27.9957354319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| |||
|short_description=p1@Tbl3 | |||
}} |
Revision as of 10:29, 4 August 2015
Short description: | p1@Tbl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 0bp_to_ENSMUST00000046534, ENSMUST00000126319, ENSMUST00000167702, NM_145396, uc008axv.1, uc012amp.1_5end |
EntrezGene: | 213773 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.54e-18 | 97 |
somatic stem cell | 2.06e-17 | 91 |
multi fate stem cell | 2.06e-17 | 91 |
motile cell | 1.96e-14 | 54 |
neural cell | 8.93e-13 | 43 |
ectodermal cell | 2.30e-12 | 44 |
neurectodermal cell | 2.30e-12 | 44 |
connective tissue cell | 1.94e-11 | 46 |
mesenchymal cell | 1.94e-11 | 46 |
CNS neuron (sensu Vertebrata) | 9.50e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.50e-10 | 23 |
neuron | 5.22e-09 | 33 |
neuronal stem cell | 5.22e-09 | 33 |
neuroblast | 5.22e-09 | 33 |
electrically signaling cell | 5.22e-09 | 33 |
hematopoietic cell | 5.80e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.80e-09 | 32 |
hematopoietic stem cell | 5.80e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.80e-09 | 32 |
electrically responsive cell | 6.32e-08 | 39 |
electrically active cell | 6.32e-08 | 39 |
embryonic cell | 1.74e-07 | 70 |
common myeloid progenitor | 3.46e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.56e-12 | 75 |
central nervous system | 9.84e-12 | 73 |
connective tissue | 1.94e-11 | 46 |
gray matter | 1.08e-09 | 34 |
regional part of nervous system | 6.37e-09 | 54 |
ectoderm-derived structure | 1.91e-08 | 95 |
ectoderm | 1.91e-08 | 95 |
presumptive ectoderm | 1.91e-08 | 95 |
brain grey matter | 3.88e-08 | 29 |
regional part of telencephalon | 3.88e-08 | 29 |
telencephalon | 3.88e-08 | 29 |
neural tube | 4.00e-08 | 52 |
neural rod | 4.00e-08 | 52 |
future spinal cord | 4.00e-08 | 52 |
neural keel | 4.00e-08 | 52 |
neurectoderm | 4.57e-07 | 64 |
neural plate | 4.57e-07 | 64 |
presumptive neural plate | 4.57e-07 | 64 |
regional part of brain | 5.42e-07 | 46 |
brain | 7.92e-07 | 47 |
future brain | 7.92e-07 | 47 |