FFCP PHASE1:Mm9::chr17:23723181..23723236,-: Difference between revisions
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{{FFCP|EntrezGene=22654|HGNC=|MCL_coexpression_id=1392|UniProt=D7F2B3|association_with_transcript=0bp_to_uc008ash.2_5end|description=CAGE_peak_1_at_Zfp13_5end|id=chr17:23723181..23723236,-|ontology_enrichment_celltype=CL:0000540!3.21e-13!33;CL:0000047!3.21e-13!33;CL:0000031!3.21e-13!33;CL:0000404!3.21e-13!33;CL:0000117!7.72e-13!23;CL:0000337!7.72e-13!23;CL:0000221!1.89e-11!44;CL:0000133!1.89e-11!44;CL:0002319!2.49e-11!43;CL:0000393!4.94e-11!39;CL:0000211!4.94e-11!39;CL:0000055!3.38e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.89e-13,33;CL:0000047,2.89e-13,33;CL:0000031,2.89e-13,33;CL:0000404,2.89e-13,33;CL:0000117,6.98e-13,23;CL:0000337,6.98e-13,23;CL:0000221,2.25e-11,44;CL:0000133,2.25e-11,44;CL:0002319,2.98e-11,43;CL:0000393,4.54e-11,39;CL:0000211,4.54e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.82e-28!73;UBERON:0005743!2.82e-28!73;UBERON:0000073!8.65e-27!75;UBERON:0001016!8.65e-27!75;UBERON:0002346!1.26e-26!71;UBERON:0003075!1.26e-26!71;UBERON:0007284!1.26e-26!71;UBERON:0000033!7.80e-25!63;UBERON:0004121!8.37e-25!102;UBERON:0000924!8.37e-25!102;UBERON:0006601!8.37e-25!102;UBERON:0001049!4.68e-24!52;UBERON:0005068!4.68e-24!52;UBERON:0006241!4.68e-24!52;UBERON:0007135!4.68e-24!52;UBERON:0000955!4.41e-23!50;UBERON:0006238!4.41e-23!50;UBERON:0002616!1.15e-22!49;UBERON:0003056!2.18e-22!49;UBERON:0003080!1.20e-19!40;UBERON:0002780!3.95e-19!39;UBERON:0001890!3.95e-19!39;UBERON:0006240!3.95e-19!39;UBERON:0002020!8.84e-17!34;UBERON:0002791!1.11e-14!29;UBERON:0003528!1.11e-14!29;UBERON:0001893!1.11e-14!29;UBERON:0000153!6.85e-11!94;UBERON:0000956!1.07e-10!21;UBERON:0001869!1.07e-10!21;UBERON:0000203!1.07e-10!21;UBERON:0000025!2.02e-10!114;UBERON:0000468!2.70e-10!333;UBERON:0007811!6.33e-10!86;UBERON:0004111!7.93e-10!122;UBERON:0002619!2.20e-08!17;UBERON:0000922!2.22e-08!328;UBERON:0000479!1.10e-07!349;UBERON:0000475!3.55e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.22e-28,73;UBERON:0002346,9.39e-28,64;UBERON:0003075,9.39e-28,64;UBERON:0007284,9.39e-28,64;UBERON:0001016,9.67e-27,75;UBERON:0000073,4.25e-25,54;UBERON:0004121,7.46e-25,95;UBERON:0000924,7.46e-25,95;UBERON:0006601,7.46e-25,95;UBERON:0001049,3.82e-24,52;UBERON:0005068,3.82e-24,52;UBERON:0006241,3.82e-24,52;UBERON:0007135,3.82e-24,52;UBERON:0010371,4.19e-24,73;UBERON:0003056,1.81e-22,49;UBERON:0010314,3.49e-22,92;UBERON:0000955,5.31e-22,47;UBERON:0006238,5.31e-22,47;UBERON:0002616,1.37e-21,46;UBERON:0003080,1.02e-19,40;UBERON:0002780,3.37e-19,39;UBERON:0001890,3.37e-19,39;UBERON:0006240,3.37e-19,39;UBERON:0002020,7.71e-17,34;UBERON:0003528,9.87e-15,29;UBERON:0002791,9.87e-15,29;UBERON:0001893,9.87e-15,29;UBERON:0000956,9.84e-11,21;UBERON:0001869,9.84e-11,21;UBERON:0000203,9.84e-11,21;UBERON:0000025,2.30e-10,114;UBERON:0004111,8.98e-10,122;UBERON:0002619,2.07e-08,17;UBERON:0000479,2.55e-07,349|phase1_expression=11.5307169915452,0,0,0,0,1.84667199103079,3.03696432774183,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,9.09963204616447,0.0992909512008853,0,1.27993938234725,2.06468352960453,0,0.86152399231815,1.07735616342945,1.90023419456374,1.51218077855958,2.43903561720835,0.635030673459631,4.30545351309199,0,5.48818077527422,5.98444723290572,2.6542016314108,0,0,0,0,0,0,9.31636453019272,6.9950082541465,7.89251034295231,10.9534788208725,11.9913836009246,8.34807494390993,9.72149495371417,8.25919887589639,5.75010257459886,0,0,0,5.14518872071894,4.29800159908135,6.18806510732931,22.8617600771345,26.4495489636016,25.3532561402472,7.79342423759004,6.22506357277798,0.449949858640699,1.97773272513395,0.7104801149461,7.49000276296012,12.6792040756113,19.4936471139938,23.2210213930508,22.7150958259493,15.7108041422092,13.0312439161452,19.8435094728226,21.8527673921579,22.0612508786405,12.1127469099328,16.4716666129892,15.5142598588806,24.9265083810066,28.0867065859398,22.3992749339407,11.725685958058,18.5711661310454,13.9046405476897,18.8562294703147,13.6676813567139,21.4359362699096,0.757261933331841,5.66786700800891,4.34796733052517,0.860423876981386,0,1.61910957491345,2.59910566979068,0.448026887097336,2.66844398250329,5.45377032249785,9.09251016110041,5.3000936176551,10.9857867425811,11.5493829672886,2.54805239706646,0,0.865964164044856,2.28023878927589,1.01104889002957,2.62622923353838,1.03575153458869,6.23456984072264,9.71517829890361,6.39377504455497,10.6083128737787,8.89263579260473,11.4061045921634,8.04266184509923,0.741584903203122,3.03658649531814,0,7.44127509758082,2.87093973998512,1.93950101254089,0,14.0534782565543,19.2690970268379,1.53274233125155,0.239630249011841,0.599902730993408,0,16.6267609739353,15.0975198930147,24.6282530141214,16.5133104182663,22.7586757023994,15.9996794310861,16.8730913590468,21.5899451362671,8.21086006026614,20.217820674694,5.47148825304832,19.1277051155174,14.9436367881757,14.945156773844,15.6733010549144,16.3287597963187,17.4234659587396,14.3363638576385,11.9003550539947,13.1496475689034,15.8849107340968,15.48369892642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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22654 | |||
|HGNC= | |||
|MCL_coexpression_id=1392 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D7F2B3 | |||
|association_with_transcript=0bp_to_uc008ash.2_5end | |||
|cluster_id=chr17:23723181..23723236,- | |||
|description=CAGE_peak_1_at_Zfp13_5end | |||
|id=chr17:23723181..23723236,- | |||
|ontology_enrichment_celltype=CL:0000540!3.21e-13!33;CL:0000047!3.21e-13!33;CL:0000031!3.21e-13!33;CL:0000404!3.21e-13!33;CL:0000117!7.72e-13!23;CL:0000337!7.72e-13!23;CL:0000221!1.89e-11!44;CL:0000133!1.89e-11!44;CL:0002319!2.49e-11!43;CL:0000393!4.94e-11!39;CL:0000211!4.94e-11!39;CL:0000055!3.38e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.89e-13,33;CL:0000047,2.89e-13,33;CL:0000031,2.89e-13,33;CL:0000404,2.89e-13,33;CL:0000117,6.98e-13,23;CL:0000337,6.98e-13,23;CL:0000221,2.25e-11,44;CL:0000133,2.25e-11,44;CL:0002319,2.98e-11,43;CL:0000393,4.54e-11,39;CL:0000211,4.54e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.82e-28!73;UBERON:0005743!2.82e-28!73;UBERON:0000073!8.65e-27!75;UBERON:0001016!8.65e-27!75;UBERON:0002346!1.26e-26!71;UBERON:0003075!1.26e-26!71;UBERON:0007284!1.26e-26!71;UBERON:0000033!7.80e-25!63;UBERON:0004121!8.37e-25!102;UBERON:0000924!8.37e-25!102;UBERON:0006601!8.37e-25!102;UBERON:0001049!4.68e-24!52;UBERON:0005068!4.68e-24!52;UBERON:0006241!4.68e-24!52;UBERON:0007135!4.68e-24!52;UBERON:0000955!4.41e-23!50;UBERON:0006238!4.41e-23!50;UBERON:0002616!1.15e-22!49;UBERON:0003056!2.18e-22!49;UBERON:0003080!1.20e-19!40;UBERON:0002780!3.95e-19!39;UBERON:0001890!3.95e-19!39;UBERON:0006240!3.95e-19!39;UBERON:0002020!8.84e-17!34;UBERON:0002791!1.11e-14!29;UBERON:0003528!1.11e-14!29;UBERON:0001893!1.11e-14!29;UBERON:0000153!6.85e-11!94;UBERON:0000956!1.07e-10!21;UBERON:0001869!1.07e-10!21;UBERON:0000203!1.07e-10!21;UBERON:0000025!2.02e-10!114;UBERON:0000468!2.70e-10!333;UBERON:0007811!6.33e-10!86;UBERON:0004111!7.93e-10!122;UBERON:0002619!2.20e-08!17;UBERON:0000922!2.22e-08!328;UBERON:0000479!1.10e-07!349;UBERON:0000475!3.55e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.22e-28,73;UBERON:0002346,9.39e-28,64;UBERON:0003075,9.39e-28,64;UBERON:0007284,9.39e-28,64;UBERON:0001016,9.67e-27,75;UBERON:0000073,4.25e-25,54;UBERON:0004121,7.46e-25,95;UBERON:0000924,7.46e-25,95;UBERON:0006601,7.46e-25,95;UBERON:0001049,3.82e-24,52;UBERON:0005068,3.82e-24,52;UBERON:0006241,3.82e-24,52;UBERON:0007135,3.82e-24,52;UBERON:0010371,4.19e-24,73;UBERON:0003056,1.81e-22,49;UBERON:0010314,3.49e-22,92;UBERON:0000955,5.31e-22,47;UBERON:0006238,5.31e-22,47;UBERON:0002616,1.37e-21,46;UBERON:0003080,1.02e-19,40;UBERON:0002780,3.37e-19,39;UBERON:0001890,3.37e-19,39;UBERON:0006240,3.37e-19,39;UBERON:0002020,7.71e-17,34;UBERON:0003528,9.87e-15,29;UBERON:0002791,9.87e-15,29;UBERON:0001893,9.87e-15,29;UBERON:0000956,9.84e-11,21;UBERON:0001869,9.84e-11,21;UBERON:0000203,9.84e-11,21;UBERON:0000025,2.30e-10,114;UBERON:0004111,8.98e-10,122;UBERON:0002619,2.07e-08,17;UBERON:0000479,2.55e-07,349 | |||
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| |||
|short_description=p1@Zfp13 | |||
}} |
Revision as of 09:18, 4 August 2015
Short description: | p1@Zfp13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1392 |
Association with transcript: | 0bp_to_uc008ash.2_5end |
EntrezGene: | 22654 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.89e-13 | 33 |
neuronal stem cell | 2.89e-13 | 33 |
neuroblast | 2.89e-13 | 33 |
electrically signaling cell | 2.89e-13 | 33 |
CNS neuron (sensu Vertebrata) | 6.98e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.98e-13 | 23 |
ectodermal cell | 2.25e-11 | 44 |
neurectodermal cell | 2.25e-11 | 44 |
neural cell | 2.98e-11 | 43 |
electrically responsive cell | 4.54e-11 | 39 |
electrically active cell | 4.54e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.22e-28 | 73 |
neurectoderm | 9.39e-28 | 64 |
neural plate | 9.39e-28 | 64 |
presumptive neural plate | 9.39e-28 | 64 |
nervous system | 9.67e-27 | 75 |
regional part of nervous system | 4.25e-25 | 54 |
ectoderm-derived structure | 7.46e-25 | 95 |
ectoderm | 7.46e-25 | 95 |
presumptive ectoderm | 7.46e-25 | 95 |
neural tube | 3.82e-24 | 52 |
neural rod | 3.82e-24 | 52 |
future spinal cord | 3.82e-24 | 52 |
neural keel | 3.82e-24 | 52 |
ecto-epithelium | 4.19e-24 | 73 |
pre-chordal neural plate | 1.81e-22 | 49 |
structure with developmental contribution from neural crest | 3.49e-22 | 92 |
brain | 5.31e-22 | 47 |
future brain | 5.31e-22 | 47 |
regional part of brain | 1.37e-21 | 46 |
anterior neural tube | 1.02e-19 | 40 |
regional part of forebrain | 3.37e-19 | 39 |
forebrain | 3.37e-19 | 39 |
future forebrain | 3.37e-19 | 39 |
gray matter | 7.71e-17 | 34 |
brain grey matter | 9.87e-15 | 29 |
regional part of telencephalon | 9.87e-15 | 29 |
telencephalon | 9.87e-15 | 29 |
cerebral cortex | 9.84e-11 | 21 |
cerebral hemisphere | 9.84e-11 | 21 |
pallium | 9.84e-11 | 21 |
tube | 2.30e-10 | 114 |
anatomical conduit | 8.98e-10 | 122 |
regional part of cerebral cortex | 2.07e-08 | 17 |
tissue | 2.55e-07 | 349 |