FFCP PHASE1:Hg19::chr5:140013224..140013235,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1628 | |||
|TSSclassifier=strong | |||
|UniProt=D6RFL4 | |||
|association_with_transcript=0bp_to_ENST00000498971_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_12_at_CD14_5end | |||
|id=chr5:140013224..140013235,- | |||
|ontology_enrichment_celltype=CL:0000766!5.62e-38!76;CL:0002194!2.79e-36!63;CL:0000576!2.79e-36!63;CL:0000040!2.79e-36!63;CL:0000559!2.79e-36!63;CL:0002009!8.38e-35!65;CL:0002057!6.44e-33!42;CL:0000839!1.77e-31!70;CL:0000557!7.19e-31!71;CL:0000860!4.33e-30!45;CL:0000763!1.00e-22!112;CL:0000049!1.00e-22!112;CL:0000738!5.83e-22!140;CL:0002087!2.03e-21!119;CL:0002031!1.09e-16!124;CL:0000037!4.79e-16!172;CL:0000566!4.79e-16!172;CL:0002032!1.41e-14!165;CL:0000837!1.41e-14!165;CL:0000988!2.16e-14!182;CL:0002393!1.18e-07!9;CL:0002397!1.18e-07!9;CL:0002619!1.56e-07!3;CL:0000235!2.39e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.37e-34;39!CL:0000234;8.37e-34;39!CL:0000235;9.47e-34;6!CL:0002619;3.72e-25;3!CL:0000576;3.78e-25;48!CL:0000860;7.28e-20;33!CL:0002057;7.28e-20;33!CL:0000766;2.07e-18;69!CL:0000771;2.99e-17;2!CL:0000763;1.23e-13;100!CL:0000738;4.45e-10;136!CL:0002087;8.69e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.78e-50,59;CL:0000576,5.78e-50,59;CL:0000040,5.78e-50,59;CL:0000559,5.78e-50,59;CL:0000766,1.28e-49,72;CL:0002009,3.01e-48,61;CL:0000473,5.14e-45,48;CL:0000234,5.14e-45,48;CL:0000839,2.11e-44,66;CL:0000557,1.06e-43,67;CL:0000235,9.81e-34,6;CL:0000763,4.43e-32,108;CL:0000049,4.43e-32,108;CL:0002619,3.57e-25,3;CL:0000860,3.75e-25,42;CL:0002057,3.75e-25,42;CL:0000738,8.54e-25,136;CL:0002087,3.16e-24,115;CL:0002031,4.38e-23,120;CL:0002032,2.07e-20,161;CL:0000837,2.07e-20,161;CL:0000037,2.06e-19,168;CL:0000988,3.02e-18,177;CL:0000771,2.07e-17,2;CL:0000134,2.98e-07,354;CL:0002320,4.90e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-19;42!CL:0000049;7.76e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.73e-36!102;UBERON:0003061!5.73e-36!102;UBERON:0002193!9.14e-33!112;UBERON:0002371!4.38e-26!80;UBERON:0007023!2.93e-25!115;UBERON:0001474!1.85e-23!86;UBERON:0004765!1.98e-19!101;UBERON:0001434!1.98e-19!101;UBERON:0002405!9.06e-18!115;UBERON:0003081!1.29e-17!216;UBERON:0002204!1.32e-11!167;UBERON:0000178!1.33e-11!15;UBERON:0000179!1.33e-11!15;UBERON:0000463!1.33e-11!15;UBERON:0000926!2.24e-07!448;UBERON:0004120!2.24e-07!448;UBERON:0006603!2.24e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.16e-39,98;UBERON:0003061,5.16e-39,98;UBERON:0002371,3.31e-38,76;UBERON:0001474,3.33e-35,82;UBERON:0002193,4.14e-35,108;UBERON:0004765,8.17e-32,90;UBERON:0002405,1.08e-30,93;UBERON:0001434,2.49e-28,100;UBERON:0003081,4.72e-17,203;UBERON:0002204,1.17e-15,167;UBERON:0000926,1.20e-09,315;UBERON:0004120,1.20e-09,315;UBERON:0006603,1.20e-09,315;UBERON:0002384,9.68e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.77408061658038,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,9.40444991807682,1.29557466407592,4.63636021741536,2.03557534291391,1.13362783106643,0.242584061187816,2.09186133215116,0.411167888021826,0.929119112685311,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,2.44715041405386,0.545812300115692,3.37085226667627,1.53041946185451,0,0.639337125799041,0,0,0,1.45104619314292,0,0,0.502497330513487,1.0429658368404,0.65156653411535,0,0.368277635987565,0.316462387440884,0.211255286311942,2.12604299965044,2.09658645508376,3.36985893439485,4.05477610672067,0.803627933485401,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,0.468008530278475,1.18904929830983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,4.01805673145701,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.476463550915578,0.822724546172388,0.648473311192717,1.62009431171434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0.281951753939561,0.45120521581504,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p12@CD14 | |||
}} |
Revision as of 07:50, 22 January 2014
Short description: | p12@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CD14_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000498971_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | D6RFL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.78e-50 | 59 |
monocyte | 5.78e-50 | 59 |
monoblast | 5.78e-50 | 59 |
promonocyte | 5.78e-50 | 59 |
myeloid leukocyte | 1.28e-49 | 72 |
macrophage dendritic cell progenitor | 3.01e-48 | 61 |
defensive cell | 5.14e-45 | 48 |
phagocyte | 5.14e-45 | 48 |
myeloid lineage restricted progenitor cell | 2.11e-44 | 66 |
granulocyte monocyte progenitor cell | 1.06e-43 | 67 |
macrophage | 9.81e-34 | 6 |
myeloid cell | 4.43e-32 | 108 |
common myeloid progenitor | 4.43e-32 | 108 |
adult endothelial progenitor cell | 3.57e-25 | 3 |
classical monocyte | 3.75e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.75e-25 | 42 |
leukocyte | 8.54e-25 | 136 |
nongranular leukocyte | 3.16e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 4.38e-23 | 120 |
hematopoietic oligopotent progenitor cell | 2.07e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-20 | 161 |
hematopoietic stem cell | 2.06e-19 | 168 |
hematopoietic cell | 3.02e-18 | 177 |
eosinophil | 2.07e-17 | 2 |
mesenchymal cell | 2.98e-07 | 354 |
connective tissue cell | 4.90e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.16e-39 | 98 |
blood island | 5.16e-39 | 98 |
bone marrow | 3.31e-38 | 76 |
bone element | 3.33e-35 | 82 |
hemolymphoid system | 4.14e-35 | 108 |
skeletal element | 8.17e-32 | 90 |
immune system | 1.08e-30 | 93 |
skeletal system | 2.49e-28 | 100 |
lateral plate mesoderm | 4.72e-17 | 203 |
musculoskeletal system | 1.17e-15 | 167 |
mesoderm | 1.20e-09 | 315 |
mesoderm-derived structure | 1.20e-09 | 315 |
presumptive mesoderm | 1.20e-09 | 315 |
connective tissue | 9.68e-07 | 371 |