FFCP PHASE1:Hg19::chr5:140013191..140013202,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1628 | |||
|TSSclassifier=strong | |||
|UniProt=D6RFL4 | |||
|association_with_transcript=33bp_to_ENST00000498971_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_10_at_CD14_5end | |||
|id=chr5:140013191..140013202,- | |||
|ontology_enrichment_celltype=CL:0002057!4.12e-51!42;CL:0000766!6.00e-51!76;CL:0002194!8.72e-51!63;CL:0000576!8.72e-51!63;CL:0000040!8.72e-51!63;CL:0000559!8.72e-51!63;CL:0002009!8.78e-49!65;CL:0000860!7.11e-47!45;CL:0000839!2.82e-44!70;CL:0000557!1.89e-43!71;CL:0000763!1.64e-29!112;CL:0000049!1.64e-29!112;CL:0002087!7.79e-28!119;CL:0000738!1.19e-27!140;CL:0002031!2.86e-22!124;CL:0000037!2.02e-19!172;CL:0000566!2.02e-19!172;CL:0002032!6.56e-18!165;CL:0000837!6.56e-18!165;CL:0000988!1.81e-17!182;CL:0002393!1.11e-09!9;CL:0002397!1.11e-09!9;CL:0002619!2.66e-07!3;CL:0000235!7.07e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.24e-47;39!CL:0000234;6.24e-47;39!CL:0000860;2.96e-45;33!CL:0002057;2.96e-45;33!CL:0000576;1.72e-43;48!CL:0000766;1.27e-33;69!CL:0000763;1.96e-19;100!CL:0002619;2.12e-19;3!CL:0000235;6.42e-17;6!CL:0000738;2.05e-10;136!CL:0002087;2.17e-10;104!CL:0002393;2.83e-09;6!CL:0002397;2.83e-09;6!CL:0000094;4.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.09e-68,72;CL:0002194,2.49e-67,59;CL:0000576,2.49e-67,59;CL:0000040,2.49e-67,59;CL:0000559,2.49e-67,59;CL:0000473,2.10e-66,48;CL:0000234,2.10e-66,48;CL:0002009,5.45e-65,61;CL:0000839,9.41e-60,66;CL:0000557,8.49e-59,67;CL:0000860,8.60e-52,42;CL:0002057,8.60e-52,42;CL:0000763,1.07e-43,108;CL:0000049,1.07e-43,108;CL:0000738,3.86e-36,136;CL:0002087,6.31e-35,115;CL:0002031,9.82e-31,120;CL:0000037,3.16e-28,168;CL:0002032,1.41e-27,161;CL:0000837,1.41e-27,161;CL:0000988,1.64e-26,177;CL:0002619,2.12e-19,3;CL:0000235,5.93e-17,6;CL:0000134,2.31e-11,354;CL:0002320,5.00e-11,361;CL:0000219,7.66e-10,386;CL:0000048,2.17e-08,427;CL:0000723,3.45e-08,433;CL:0000034,6.27e-08,441;CL:0000094,4.28e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.95e-37;42!CL:0000049;4.92e-16;108!UBERON:0010115;4.74e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.46e-44!102;UBERON:0003061!5.46e-44!102;UBERON:0002193!8.80e-42!112;UBERON:0002371!5.93e-37!80;UBERON:0001474!2.21e-33!86;UBERON:0004765!9.87e-28!101;UBERON:0001434!9.87e-28!101;UBERON:0002405!1.45e-27!115;UBERON:0007023!2.29e-21!115;UBERON:0003081!3.22e-17!216;UBERON:0002204!1.28e-13!167;UBERON:0000062!1.37e-08!511;UBERON:0000467!4.59e-07!625;UBERON:0000480!5.17e-07!626;UBERON:0002298!8.24e-07!8;UBERON:0000178!9.25e-07!15;UBERON:0000179!9.25e-07!15;UBERON:0000463!9.25e-07!15;UBERON:0000923!9.93e-07!604;UBERON:0005291!9.93e-07!604;UBERON:0006598!9.93e-07!604;UBERON:0002532!9.93e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;4.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.58e-51,76;UBERON:0001474,3.16e-47,82;UBERON:0002390,3.66e-45,98;UBERON:0003061,3.66e-45,98;UBERON:0004765,1.30e-42,90;UBERON:0002405,4.38e-41,93;UBERON:0002193,1.61e-40,108;UBERON:0001434,7.17e-38,100;UBERON:0002204,1.23e-20,167;UBERON:0003081,4.57e-19,203;UBERON:0000926,2.62e-11,315;UBERON:0004120,2.62e-11,315;UBERON:0006603,2.62e-11,315;UBERON:0002384,1.44e-10,371;UBERON:0002363,4.89e-07,1;UBERON:0007645,4.89e-07,1;UBERON:0007647,4.89e-07,1;UBERON:0010115,4.89e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.868043482863407,8.73270349535705,5.18229865630367,3.8636335145128,1.01778767145695,0.755751887377619,1.4555043671269,5.34586784883075,2.46700732813095,0.619412741790207,1.1507695692886,0.256160706529101,0.945928919554341,2.41321976515633,0.645484683583826,0,3.20011977222428,1.36453075028923,4.26974620445661,3.67300670845083,1.60464513538047,3.83602275479425,0.659702600373432,0.797854630486527,0,0.290209238628584,0,0,0.75374599577023,0.521482918420201,1.08594422352558,1.81619850790011,0.368277635987565,0.632924774881769,1.26753171787165,1.4882300997553,2.93522103711726,4.4931452458598,3.75442232103766,1.76798145366788,0,0,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41677413392274,0.468008530278475,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,5.52482800575339,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,1.70894156152249,0.476463550915578,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0.706437835654626,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |||
|short_description=p10@CD14 | |||
}} |
Revision as of 07:50, 22 January 2014
Short description: | p10@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CD14_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 33bp_to_ENST00000498971_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | D6RFL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.09e-68 | 72 |
monopoietic cell | 2.49e-67 | 59 |
monocyte | 2.49e-67 | 59 |
monoblast | 2.49e-67 | 59 |
promonocyte | 2.49e-67 | 59 |
defensive cell | 2.10e-66 | 48 |
phagocyte | 2.10e-66 | 48 |
macrophage dendritic cell progenitor | 5.45e-65 | 61 |
myeloid lineage restricted progenitor cell | 9.41e-60 | 66 |
granulocyte monocyte progenitor cell | 8.49e-59 | 67 |
classical monocyte | 8.60e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.60e-52 | 42 |
myeloid cell | 1.07e-43 | 108 |
common myeloid progenitor | 1.07e-43 | 108 |
leukocyte | 3.86e-36 | 136 |
nongranular leukocyte | 6.31e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 9.82e-31 | 120 |
hematopoietic stem cell | 3.16e-28 | 168 |
hematopoietic oligopotent progenitor cell | 1.41e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-27 | 161 |
hematopoietic cell | 1.64e-26 | 177 |
adult endothelial progenitor cell | 2.12e-19 | 3 |
macrophage | 5.93e-17 | 6 |
mesenchymal cell | 2.31e-11 | 354 |
connective tissue cell | 5.00e-11 | 361 |
motile cell | 7.66e-10 | 386 |
multi fate stem cell | 2.17e-08 | 427 |
somatic stem cell | 3.45e-08 | 433 |
stem cell | 6.27e-08 | 441 |
granulocyte | 4.28e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.58e-51 | 76 |
bone element | 3.16e-47 | 82 |
hematopoietic system | 3.66e-45 | 98 |
blood island | 3.66e-45 | 98 |
skeletal element | 1.30e-42 | 90 |
immune system | 4.38e-41 | 93 |
hemolymphoid system | 1.61e-40 | 108 |
skeletal system | 7.17e-38 | 100 |
musculoskeletal system | 1.23e-20 | 167 |
lateral plate mesoderm | 4.57e-19 | 203 |
mesoderm | 2.62e-11 | 315 |
mesoderm-derived structure | 2.62e-11 | 315 |
presumptive mesoderm | 2.62e-11 | 315 |
connective tissue | 1.44e-10 | 371 |
dura mater | 4.89e-07 | 1 |
future meninx | 4.89e-07 | 1 |
ectomeninx | 4.89e-07 | 1 |
future dura mater | 4.89e-07 | 1 |