FFCP PHASE1:Hg19::chr5:140012540..140012567,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1628 | |||
|TSSclassifier=strong | |||
|UniProt=P08571 | |||
|association_with_transcript=0bp_to_AB446505,AB528100,AF097942,AY044269,BT007331_5end | |||
|coexpression_cluster_id=C803 | |||
|description=CAGE_peak_8_at_CD14_5end | |||
|id=chr5:140012540..140012567,- | |||
|ontology_enrichment_celltype=CL:0000766!2.21e-54!76;CL:0002057!4.67e-53!42;CL:0000860!1.89e-48!45;CL:0002194!6.60e-44!63;CL:0000576!6.60e-44!63;CL:0000040!6.60e-44!63;CL:0000559!6.60e-44!63;CL:0000839!5.18e-43!70;CL:0000557!3.77e-42!71;CL:0002009!5.02e-42!65;CL:0000763!2.73e-30!112;CL:0000049!2.73e-30!112;CL:0000738!1.08e-28!140;CL:0002087!1.86e-23!119;CL:0002031!1.73e-21!124;CL:0000037!2.19e-19!172;CL:0000566!2.19e-19!172;CL:0002032!2.29e-18!165;CL:0000837!2.29e-18!165;CL:0000988!5.32e-18!182;CL:0000094!5.12e-11!8;CL:0002393!1.48e-09!9;CL:0002397!1.48e-09!9;CL:0000081!1.75e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.91e-76;33!CL:0002057;4.91e-76;33!CL:0000473;2.69e-72;39!CL:0000234;2.69e-72;39!CL:0000576;1.73e-61;48!CL:0000766;1.97e-42;69!CL:0000763;3.45e-22;100!CL:0002393;7.32e-19;6!CL:0002397;7.32e-19;6!CL:0002087;2.88e-16;104!CL:0000738;1.81e-12;136!CL:0002619;1.24e-10;3!CL:0000094;7.22e-10;8!CL:0000235;1.40e-09;6!CL:0000771;1.83e-07;2!CL:0000081;4.33e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.64e-103,48;CL:0000234,3.64e-103,48;CL:0000766,1.70e-95,72;CL:0000860,5.68e-95,42;CL:0002057,5.68e-95,42;CL:0002194,5.93e-94,59;CL:0000576,5.93e-94,59;CL:0000040,5.93e-94,59;CL:0000559,5.93e-94,59;CL:0002009,1.41e-90,61;CL:0000839,5.14e-83,66;CL:0000557,1.23e-81,67;CL:0000763,3.51e-60,108;CL:0000049,3.51e-60,108;CL:0000738,5.52e-50,136;CL:0002087,4.55e-48,115;CL:0002031,2.00e-43,120;CL:0002032,1.25e-38,161;CL:0000837,1.25e-38,161;CL:0000037,2.63e-38,168;CL:0000988,8.89e-36,177;CL:0000134,8.99e-15,354;CL:0002320,2.97e-14,361;CL:0000219,1.99e-12,386;CL:0002393,2.01e-12,9;CL:0002397,2.01e-12,9;CL:0002619,1.47e-10,3;CL:0000048,3.36e-10,427;CL:0000094,4.43e-10,8;CL:0000723,6.80e-10,433;CL:0000235,1.32e-09,6;CL:0000034,1.69e-09,441;CL:0000771,1.66e-07,2;CL:0000081,3.07e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.74e-68;42!CL:0000049;2.21e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.92e-46!102;UBERON:0003061!5.92e-46!102;UBERON:0002193!1.13e-42!112;UBERON:0002371!2.21e-35!80;UBERON:0002405!2.18e-33!115;UBERON:0001474!1.13e-31!86;UBERON:0004765!1.94e-25!101;UBERON:0001434!1.94e-25!101;UBERON:0003081!8.57e-18!216;UBERON:0007023!2.22e-17!115;UBERON:0002204!1.06e-12!167;UBERON:0000178!1.38e-11!15;UBERON:0000179!1.38e-11!15;UBERON:0000463!1.38e-11!15;UBERON:0000923!1.11e-08!604;UBERON:0005291!1.11e-08!604;UBERON:0006598!1.11e-08!604;UBERON:0002532!1.11e-08!604;UBERON:0002050!1.31e-08!605;UBERON:0005423!1.31e-08!605;UBERON:0000926!3.13e-08!448;UBERON:0004120!3.13e-08!448;UBERON:0006603!3.13e-08!448;UBERON:0000922!4.03e-08!612;UBERON:0000062!9.08e-08!511;UBERON:0000467!1.10e-07!625;UBERON:0000480!1.28e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.34e-07;15!UBERON:0000179;3.34e-07;15!UBERON:0000463;3.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.72e-71,76;UBERON:0002390,2.73e-70,98;UBERON:0003061,2.73e-70,98;UBERON:0001474,6.10e-65,82;UBERON:0002193,8.78e-63,108;UBERON:0004765,2.75e-58,90;UBERON:0002405,4.39e-56,93;UBERON:0001434,1.88e-51,100;UBERON:0003081,1.34e-29,203;UBERON:0002204,1.13e-26,167;UBERON:0000926,7.14e-16,315;UBERON:0004120,7.14e-16,315;UBERON:0006603,7.14e-16,315;UBERON:0002384,1.51e-13,371;UBERON:0000178,4.41e-07,15;UBERON:0000179,4.41e-07,15;UBERON:0000463,4.41e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.383829398097213,0.619264493264304,0,0,0,0,0,0,3.87796785972314,2.4065333696417,2.82114131930607,3.13481663935894,2.26725566213286,2.83333124397605,3.34415949192999,1.51150377475524,1.4555043671269,6.97287110717054,0.411167888021826,1.85823822537062,5.17846306179871,3.33008918487831,4.02019790810595,3.44745680736619,2.5819387343353,1.35426486594342,4.70605848856512,0.818718450173537,5.16864014223695,6.12167784741805,3.20929027076094,3.19668562899521,4.28806690242731,3.59034583718937,3.40979800426155,1.16083695451434,0.56738522469114,1.86846674698672,5.52747063564835,3.65038042894141,2.17188844705117,1.21079900526674,1.47311054395026,2.21523671208619,1.47878700418359,1.06302149982522,2.72556239160889,6.8520464999362,8.10955221344134,4.17886525412408,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.127986611154418,2.49861453104692,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,3.9313088667105,1.77236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69325509131096,0,2.67536092119711,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,7.29742683847143,4.01805673145701,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,1.17400313583789,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,1.01489521846434,0.764637207142375,2.27858874869665,0.476463550915578,0.822724546172388,4.53931317834902,2.16012574895246,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0.173559738335131,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0,0.39669780522807,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0.171488009437418,0.0679697329768317,0.197318320688547,0,0,0.313972371402056,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.134704106029175,0.286888821570705,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p8@CD14 | |||
}} |
Revision as of 07:50, 22 January 2014
Short description: | p8@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CD14_5end |
Coexpression cluster: | C803_Macrophage_CD14_Monocytederived_Eosinophils_Basophils_CD14CD16_Dendritic |
Association with transcript: | 0bp_to_AB446505, AB528100, AF097942, AY044269, BT007331_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | P08571 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.72e-71 | 76 |
hematopoietic system | 2.73e-70 | 98 |
blood island | 2.73e-70 | 98 |
bone element | 6.10e-65 | 82 |
hemolymphoid system | 8.78e-63 | 108 |
skeletal element | 2.75e-58 | 90 |
immune system | 4.39e-56 | 93 |
skeletal system | 1.88e-51 | 100 |
lateral plate mesoderm | 1.34e-29 | 203 |
musculoskeletal system | 1.13e-26 | 167 |
mesoderm | 7.14e-16 | 315 |
mesoderm-derived structure | 7.14e-16 | 315 |
presumptive mesoderm | 7.14e-16 | 315 |
connective tissue | 1.51e-13 | 371 |
blood | 4.41e-07 | 15 |
haemolymphatic fluid | 4.41e-07 | 15 |
organism substance | 4.41e-07 | 15 |