FFCP PHASE1:Hg19::chr5:139944196..139944219,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20708 | |||
|TSSclassifier=strong | |||
|UniProt=O95704,Q59EH2,Q96DX9,Q54A46 | |||
|association_with_transcript=-7bp_to_NM_006051,NM_133172,NM_133173,NM_133174,uc003lgd.1,uc003lge.1,uc003lgf.1,uc010jfp.1,uc010jfr.1,uc011czi.1_5end | |||
|description=CAGE_peak_4_at_APBB3_5end | |||
|id=chr5:139944196..139944219,- | |||
|ontology_enrichment_celltype=CL:0000838!2.15e-09!52;CL:0000542!7.23e-09!53;CL:0000051!7.23e-09!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.22e-07,52;CL:0000542,6.63e-07,53;CL:0000051,6.63e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.76e-08;3 | |||
|ontology_enrichment_disease=DOID:162!4.49e-12!235;DOID:14566!8.64e-12!239;DOID:0050687!1.15e-07!143;DOID:0050686!7.98e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:171;2.05e-11;10!DOID:3095;2.63e-09;22!DOID:2994;2.63e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.62e-11,10;DOID:3095,4.10e-09,22;DOID:2994,4.10e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.08e-07!94;UBERON:0001016!2.08e-07!94;UBERON:0001049!9.81e-07!57;UBERON:0005068!9.81e-07!57;UBERON:0006241!9.81e-07!57;UBERON:0007135!9.81e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.64e-10;4!UBERON:0000923;1.64e-10;4!UBERON:0010316;1.64e-10;4!UBERON:0005291;1.64e-10;4!UBERON:0002050;2.11e-08;5!UBERON:0005423;2.11e-08;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.783556884599516,0,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,0,0.273748850145768,0.376627918784408,0.993374274723366,0.985207073399349,0.944529375764151,0.786728553697808,0,0,0,0.90361775633475,0.369754010166788,1.16200800870452,0.568676929949686,0.880801318004542,0,0.200544447470142,0.868043482863407,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,1.72372840368309,1.29096936716765,0,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0.852449501065388,0.290209238628584,0,0,1.50749199154046,1.5644487552606,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0.561643155732475,0.450530678524519,0,0,0,0.547992461293902,0,0.546138611262131,0.889509253863555,0.426730222566507,1.20118796110804,0.574752439954483,1.32208974556972,0,0.569212969109448,0,1.14681968437569,0,0,0,0.983548850569165,0,1.64481199199607,0.668745981562712,0,0.946895611469467,0,0.222820913770347,0.589211814949674,0.443067789167242,1.08321545506006,0.25618263945135,0.260118695119756,0.822189523018381,1.10540007114339,0,0.444859689486181,0.802622484269139,2.09071047609954,0.113309342697566,0,0,1.01207876807801,0.318565414324097,1.30216690771284,0,0.602300476311091,0.76791966692651,2.49861453104692,0.473554504088034,0.821127996921047,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0.472674085820339,0.221729397462564,0.527008714158756,0.654895377488563,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,1.72101972449288,0,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0.70296429550139,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.717558542755448,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0.184099797284599,0,0,0.403008392910561,0.169560592310488,0,0,0,0.853815942907168,0.927708378250397,0.116193942869518,0.725627385107593,0.252320850875628,0.72995471815166,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0.441175890929576,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,2.6487785964879,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.144366447761074,0.462985512576611,0,0,1.71697232418975,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.264145302039678,0.207328115540772,1.29707958075265,0.88369703398466,0.253991577168676,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0,0,0.845302752556,0,0,0,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0.448340575974109,0.591092280605782,0.215627574859517,0.256686072559497,0.254094624222463,0,0,1.84267891867784,0,0,0,0,0.613457458595699,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.587403472388222,0.343143423810856,1.24060815673732,0,0.213455115606889,0.303127571446259,0,0.907170879989041,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0.40101294060657,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.103041011647722,0.27470839445503,0.577566499444116,0,0.650060246036521,0,0.580024309752732,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0.178064071293475,0,0.192190067365106,0.510450849978337,0,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,1.34060455107157,0,0,0,0,0,0,0,0,2.27858874869665,0.476463550915578,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0.995985806877798,1.75368900001705,0.199579371432817,0.191505370132367,0.423347165447766,0,0.842391534340376,0.228234679033192,2.19351854082233,0,0,0.802940375518498,0.403599414382095,1.27753871307098,1.03051603426729,0.307240764308458,0.223676107892416,0.500547425135725,0,0.278406173895242,0,0.540911356951966,1.33228787199128,0,0,0,0.242721043499027,1.22587722705226,0.568272293612826,0.47748896947538,0.296964680832639,0.307160702099232,0.994147647766298,0.703347082052564,1.33570446027487,1.15362711958732,2.11125408127993,0,0.276283915531148,1.51159648712566,0.511343412510774,1.10776324914963,0,0.718946809178615,1.07412704805365,1.02314474045374,0.493217028184668,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,1.04951999995435,0,0.455173793141999,0,0,0.344743373241465,1.16641845353302,2.08349993919951,0.885741385813839,0.60298219312704,4.5774520895125,1.3269511191747,1.47773809476774,0.219385397153973,0.32681539055697,0.278847488557207,0.0769502585037971,0.569710279235006,0.23056390438806,1.25660702173681,0.760531603454056,0,0.0915975934018623,0.533034776018635,1.02193298195737,0.156980256395025,0,0.676786981851542,0.784250137270958,0.167821586975843,0,0.317873157960757,1.26598838716816,0.326465616318295,0.565412285735763,0.649165919226273,0.995261931078505,0.353830258013357,0,0.889563386041866,0.617819694732514,0.208843899010911,0.539209063845416,0.802577647298789,0.234264445725339,0.547364367646998,0.19566461893209,0.242780379534093,0,0,1.83643656978294,0.189559738885464,8.26778806779709,0.207376382794494,0,0,0.941798755221676,1.19472429772959,0,0,0.347119476670262,0.195984794828755,0.435296032902013,0.17472666824203,0.51595809741485,0.483781656445426,0.803982487948041,0.328461828212837,0.387956065953678,0.264768380074501,0.225980740780532,0.548167698587004,0.19871461170299,0.50648636764703,0.195551382734803,0,0.426905989478705,0.599428828746391,0.288180834308212,0.572682980829578,1.37275998289572,0.288109595976299,0.745515213392595,0.235694034616795,0.543616824294456,0.209205692624666,0,0,1.20084057741958,0.410716136675979,0,0,2.10309883423452,0.279282401272254,0,0,0.599037001496973,0,0,0.335917362433631,0,0,0,0,0,0.393709926058995,0.338693328263138,0,0.272406812223151,0.964518890790115,0.550157746388935,0.415440338029185,0,0,0.425246896606173,0.670869375198532,0.157611414598396,0.209818352539992,0.211200673038813,0.717149357331379,0.575745591958336,0,0.662091970365432,1.017074150619,0,0,0,0,0.246277562248017,0.340776043570843,0.339936274560377,0,0,0.904980694530854,0.52893040697076,0.342173675768659,0,0.106787412567695,0.471612915298998,0.414239055347196,0.496166021811951,0.197611631897944,0.365377795142688,0.638341257770182,0,0,0,0.655745261419609,0.628216385000937,0.886068179966986,0.732157589411779,0,0.573409195690071,0.332787154610557,0.434674820589684,1.38348634936231,0.499921631848426,0.606596470166591,0.285465333544967,0,0.468334905806882,0.869526171664951,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.336749488765919,0,1.15571898244382,0.643324774124777,0.782982875895635,0.453411851024545,0,0.244736704506468,0.71635536432595,0.617602894321944,0,0.176689145945881,0.192914038270915,0.168942440653073,0.512483037175893,0.690860683462397,0.911579868532147,0.138258436151731,0.194860308839388,0,0.327130788511688,0.982829546539238,0.245772908753719,0,1.39991177098451,0.533458648470704,0.172214979660816,0,0.184105950251841,0.279759015438889,0,0.895260599125562,0.215649622793364,1.88719130227076,1.52893493468819,1.01839517972415,2.55089904122019,1.98297222814403,1.11728983594649,0.318004350653419,0.630893960010027,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.159633859057151,0.205116364240755,1.26035848110859,0.345786262321089,0,0,0.490738592505128,0.353909170043221,0.550285795565037,0,0,0,0.397832444232549,0.752103283492572,0.20170506870352,0,0.523813388962845,0.49131575253029,0.295712172434091,0.135075169236789,0.781078098613847,0.206686796501184,0.19024743058172,2.18789923607288,0,0.496211178389294,1.05522746615772,0.383287282918786,2.67850917939143,0.336283722218824,0,0.682986574053893,0.0887023701626388,1.38280785066935,0.342976018874837,0.611727596791485,0.197318320688547,0.354581522651905,0.222462803784138,0.39246546425257,0.314231179832004,0,0.913158720509496,0.215927591218621,0,0.428859265059938,0.47404083519818,0.23248285073625,0.347716544605159,0.801711364730253,1.03608082081518,0.3414369541879,0.691259661814092,0,0.946656005844523,0.681707238073262,0,0.68732060563215,0.62041277132864,0,1.56597604516909,0.588901401691458,0.121917924982269,0,0,0,0.485710993059139,1.63757624423474,0.795803100645473,0.356760272332706,0.90356865631168,2.96839395212659,1.05673990496671,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0.8453114551668,0,0.281951753939561,0.515663103788617,0.299823467774787,0,0.705789743431384,0,0,0.458729283404541,0.286679166302903,0.157771562193185,0.271965960763659,1.30905207102113,1.0580536810308,0,0,0,0.504665699340316,0.546327859818478,1.0135880080915,0.407955318967927,1.06886962106224,0.275684698604535,0,0.606229585745915,1.87574891109325,1.65833887891756,0.620597975171371,0.426467963801962,0.23806443146374,0.322944549180031,0.744896571550295,0.897054900644907,0.12729431655633,1.41482032270754,0.217716747896961,0,0.202056159043763,0,0.332660356546013,0.488419611665847,0,0,0.359300808426348,0,0.244482888365733,0,0,0.402547587182052,0.961705476909699 | |||
|short_description=p4@APBB3 | |||
}} |
Revision as of 07:49, 22 January 2014
Short description: | p4@APBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APBB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_006051, NM_133172, NM_133173, NM_133174, uc003lgd.1, uc003lge.1, uc003lgf.1, uc010jfp.1, uc010jfr.1, uc011czi.1_5end |
EntrezGene: | APBB3 |
HGNC: | 20708 |
UniProt: | O95704Q59EH2Q96DX9Q54A46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.22e-07 | 52 |
lymphocyte | 6.63e-07 | 53 |
common lymphoid progenitor | 6.63e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.62e-11 | 10 |
germ cell and embryonal cancer | 4.10e-09 | 22 |
germ cell cancer | 4.10e-09 | 22 |