FFCP PHASE1:Hg19::chr5:135385158..135385200,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11771 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000514554_5end | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_7_at_TGFBI_5end | |||
|id=chr5:135385158..135385200,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.17e-26!180;CL:0002371!3.47e-20!591;CL:0000144!1.43e-18!625;CL:0000680!2.57e-18!57;CL:0000056!2.57e-18!57;CL:0000355!2.57e-18!57;CL:0000187!1.35e-16!54;CL:0000048!3.15e-16!430;CL:0000548!1.04e-15!679;CL:0000004!1.04e-15!679;CL:0000255!1.04e-15!679;CL:0000723!1.29e-15!436;CL:0000183!1.78e-15!59;CL:0000012!5.42e-15!682;CL:0000034!3.96e-14!444;CL:0000057!6.03e-14!75;CL:0000393!1.28e-13!60;CL:0000211!1.28e-13!60;CL:0000192!1.80e-13!42;CL:0000514!1.80e-13!42;CL:0000359!2.73e-11!32;CL:0002194!4.58e-09!63;CL:0000576!4.58e-09!63;CL:0000040!4.58e-09!63;CL:0000559!4.58e-09!63;CL:0002009!5.49e-09!65;CL:0000222!7.82e-09!119;CL:0000003!9.85e-09!722;CL:0002334!6.43e-08!12;CL:0002057!1.76e-07!42;CL:0000860!7.29e-07!45;CL:0002320!8.37e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.92e-11;32!CL:0000187;7.00e-10;55!CL:0002334;7.73e-10;12!CL:0000192;2.85e-09;43!CL:0000393;2.09e-07;61!CL:0000211;2.09e-07;61!CL:0002620;9.57e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.52e-23,427;CL:0000723,3.14e-22,433;CL:0000034,1.10e-20,441;CL:0000680,6.20e-19,58;CL:0000056,6.20e-19,58;CL:0000355,6.20e-19,58;CL:0000187,7.58e-17,55;CL:0000057,3.33e-16,76;CL:0000393,1.26e-13,61;CL:0000211,1.26e-13,61;CL:0000192,7.89e-13,43;CL:0000514,7.89e-13,43;CL:0000359,2.61e-11,32;CL:0002320,5.12e-11,361;CL:0000134,1.85e-10,354;CL:0002334,7.63e-10,12;CL:0000219,1.12e-08,386;CL:0000222,2.53e-07,121;CL:0002620,8.84e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000355;2.52e-10;58!CL:0000514;2.85e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.97e-20!167;UBERON:0001134!1.74e-17!61;UBERON:0002036!1.74e-17!61;UBERON:0003082!1.74e-17!61;UBERON:0000486!3.12e-17!82;UBERON:0002385!1.68e-16!63;UBERON:0001015!1.68e-16!63;UBERON:0000383!1.68e-16!63;UBERON:0004290!1.18e-15!70;UBERON:0000914!9.10e-15!83;UBERON:0002329!9.10e-15!83;UBERON:0003077!9.10e-15!83;UBERON:0003059!9.10e-15!83;UBERON:0007282!9.10e-15!83;UBERON:0009618!9.10e-15!83;UBERON:0007285!9.10e-15!83;UBERON:0000926!1.53e-13!448;UBERON:0004120!1.53e-13!448;UBERON:0006603!1.53e-13!448;UBERON:0000468!1.41e-11!659;UBERON:0005256!2.02e-11!143;UBERON:0003081!9.05e-11!216;UBERON:0000490!3.36e-10!138;UBERON:0001637!7.80e-10!42;UBERON:0003509!7.80e-10!42;UBERON:0004572!7.80e-10!42;UBERON:0000467!9.69e-10!625;UBERON:0000480!1.49e-09!626;UBERON:0004573!3.83e-09!33;UBERON:0004571!3.83e-09!33;UBERON:0002100!1.19e-08!216;UBERON:0004872!1.06e-07!84;UBERON:0002384!4.27e-07!375;UBERON:0002050!4.32e-07!605;UBERON:0005423!4.32e-07!605;UBERON:0000923!4.75e-07!604;UBERON:0005291!4.75e-07!604;UBERON:0006598!4.75e-07!604;UBERON:0002532!4.75e-07!604;UBERON:0000922!9.37e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.19e-09;33!UBERON:0004571;2.19e-09;33!UBERON:0002385;6.10e-09;31!UBERON:0001015;6.10e-09;31!UBERON:0000383;6.10e-09;31!UBERON:0001637;3.72e-08;42!UBERON:0003509;3.72e-08;42!UBERON:0004572;3.72e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.25e-18,167;UBERON:0001134,1.58e-17,62;UBERON:0002036,1.58e-17,62;UBERON:0003082,1.58e-17,62;UBERON:0002385,2.00e-16,64;UBERON:0001015,2.00e-16,64;UBERON:0000383,2.00e-16,64;UBERON:0000486,4.34e-16,83;UBERON:0002329,1.13e-14,71;UBERON:0003059,1.13e-14,71;UBERON:0007282,1.13e-14,71;UBERON:0004290,1.13e-14,71;UBERON:0009618,1.13e-14,71;UBERON:0007524,1.86e-14,73;UBERON:0003077,3.15e-14,72;UBERON:0007285,3.15e-14,72;UBERON:0000926,6.00e-14,315;UBERON:0004120,6.00e-14,315;UBERON:0006603,6.00e-14,315;UBERON:0007503,1.85e-12,78;UBERON:0001637,1.16e-11,42;UBERON:0003509,1.16e-11,42;UBERON:0004572,1.16e-11,42;UBERON:0002384,2.57e-11,371;UBERON:0004573,1.11e-10,33;UBERON:0004571,1.11e-10,33;UBERON:0005256,8.31e-10,122;UBERON:0000490,1.74e-08,148;UBERON:0004872,4.64e-08,83;UBERON:0003081,5.46e-08,203;UBERON:0003104,6.78e-08,160;UBERON:0009142,6.78e-08,160;UBERON:0000479,4.37e-07,773 | |||
|phase1_expression=8.17552706717505,17.7703434829516,6.76581139660662,5.00366491765652,14.7497161161005,9.59572376510406,5.06599756336621,1.89515962028049,0,1.47440361900905,2.09340350391728,3.71350332621293,5.53910654279752,0.618831764800233,1.32558950291166,16.8081286612944,15.6700577286234,12.4152715365853,12.6862527685532,5.78668972960903,5.10001728110633,6.58254915103984,0.85870796139317,3.01123735160345,0.627713197974014,0,0,0,0,0,0.464448369948228,3.67768489791571,1.204823675113,0.739508020333575,0,0,0,0.553995408531877,2.00544447470142,1.73608696572681,0.895661896959697,0.647787332037959,1.03030227053675,6.25212426752128,4.91238726795452,3.15359279544161,3.71886459049095,2.05583944010913,1.85823822537062,6.04154023876516,5.12321413058201,2.12834006899727,2.06847408441971,1.93645405075148,0,3.57660445130949,5.18521685109907,4.26974620445661,5.20342617030534,2.24650318953266,2.55734850319616,3.62836430205388,3.19141852194611,5.96714650745772,0.580418477257168,0,1.24564449799115,5.02497330513487,1.5644487552606,1.73751075764093,1.81619850790011,1.84138817993782,0.949387162322653,0.845021145247767,0.850417199860174,0.628975936525128,0.898629049171961,0.450530678524519,0.48217676009124,0.285012743741249,0.39783335439818,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,1.24930726552346,0,0,0,0,0,2.43806866313962,4.69490601792545,1.02290049474824,4.3372698286148,18.048164782892,16.8021961994556,12.7245751528176,32.117901439974,3.30871860074237,8.86917589850256,4.91874799881506,0.0654895377488563,0,2.22470665670658,1.29818957461873,2.08955684759121,6.78085598646212,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,2.43042584364528,0,0,0,0,0,0,0,0,1.74437620857014,15.4061305025549,8.86413581652058,1.45650098894541,31.8388649031183,7.80270440836386,7.28880880184999,4.2699598291882,18.0067310344527,0.933633106199299,1.21239604862719,0.653847612453835,0.908144565869588,2.30470369792,0,5.61888138294577,0,0.597794722207204,0.23486899728753,0.647491777472526,0,0.204154171254893,0.368502951935304,0.206651562351531,2.37600571456411,2.47266929278557,0,2.15585442544872,0,0.125118519871964,0,1.31693286264251,2.75839016219118,5.10809400282429,2.04177929688038,14.5305604907978,4.91181994282705,4.66250182551036,22.2067411102458,6.59536187126009,17.5195567231028,6.70020682793723,13.5021065793013,14.3232397586962,14.8935926804028,2.57739716198438,3.71785930683267,46.1512470271599,11.6872433944063,3.05209066158878,3.09217365061275,1.63647672354501,0.573609190778008,0,0,0.232387885739037,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,1.39310378409594,1.44375896333917,0.473227200159376,1.01150814046861,0,0.330881918197182,0,0,0.404493924480493,0,0,0,5.60967095213783,2.8810180793198,4.41026134156626,0,0.982827216677626,0,0,0,3.43135620597051,1.53650399572076,0,0.100528972411631,0.277765335475589,0,3.11980435583874,2.88662684050547,0.695582429850461,1.29149563659404,0.144366447761074,0.925971025153221,0,0,0,1.72351904261178,0.234004265139238,3.26988557035202,0,9.57498130733499,1.13420077793909,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,3.92364061949952,0.4400297149257,1.93907573636667,3.57656445851882,5.071816515336,0.26593811658487,1.04007436911366,0.514414748524284,0,0.266422179016099,4.14636181608628,10.8524321078289,4.93944202068461,3.25736184293735,5.68627117988073,12.6712299669349,0.301439377059586,0.871533458600294,0.399891964728228,6.08118903205952,3.01354254859276,4.21667878966063,2.63587341040741,4.59447743336456,1.42636905040718,9.55556624006023,12.328579353023,12.5342674267927,0,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,1.59498939234882,4.00136416847742,0.542530047399471,6.86303843051664,3.39015078714607,0.946214490203608,0.702848489956279,0,2.27407504055985,2.0694614258501,3.98535359121262,6.82165923604302,0.60818530127658,1.17480694477644,1.02943027143257,0.206768026122887,0.862856803274467,0.320182673410333,1.5156378572313,1.66435439510497,7.86214762657169,14.6383606613078,7.98002261097925,28.0660094433074,16.1455328062183,6.65219423786715,19.1416166160893,11.8734453155993,6.01417805830357,8.16783936440384,1.23190734020714,11.9428518712233,3.95115286763861,0.241718899183244,10.6268429260741,0.368323955743585,3.78887678943202,3.64182336013434,11.6700729313887,0,0.462092022626489,0.784349769176855,0,1.05551628892876,0,0.170093705276516,0.863663664408557,0,0.270946437543853,0,0.254876273045038,0,1.34324852833307,0,0,0,0.656029291399411,0,0.515205058238611,0,0,0.574265537996172,2.60024098414608,19.2820715812991,1.64340221096607,3.08097234229289,6.60065801322357,1.92971201478343,5.15617175367713,3.91545073568417,2.47157219506693,2.04773681987496,3.30569830721956,3.0750410778417,0.382838137483752,2.12431339796655,3.71876439437829,30.2219852957414,2.7881490806424,1.84820148105653,2.12922412126809,0.869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| |||
|short_description=p7@TGFBI | |||
}} |
Revision as of 07:34, 22 January 2014
Short description: | p7@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_7_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | -4bp_to_ENST00000514554_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.52e-23 | 427 |
somatic stem cell | 3.14e-22 | 433 |
stem cell | 1.10e-20 | 441 |
muscle precursor cell | 6.20e-19 | 58 |
myoblast | 6.20e-19 | 58 |
multi-potent skeletal muscle stem cell | 6.20e-19 | 58 |
muscle cell | 7.58e-17 | 55 |
fibroblast | 3.33e-16 | 76 |
electrically responsive cell | 1.26e-13 | 61 |
electrically active cell | 1.26e-13 | 61 |
smooth muscle cell | 7.89e-13 | 43 |
smooth muscle myoblast | 7.89e-13 | 43 |
vascular associated smooth muscle cell | 2.61e-11 | 32 |
connective tissue cell | 5.12e-11 | 361 |
mesenchymal cell | 1.85e-10 | 354 |
preadipocyte | 7.63e-10 | 12 |
motile cell | 1.12e-08 | 386 |
mesodermal cell | 2.53e-07 | 121 |
skin fibroblast | 8.84e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.25e-18 | 167 |
skeletal muscle tissue | 1.58e-17 | 62 |
striated muscle tissue | 1.58e-17 | 62 |
myotome | 1.58e-17 | 62 |
muscle tissue | 2.00e-16 | 64 |
musculature | 2.00e-16 | 64 |
musculature of body | 2.00e-16 | 64 |
multilaminar epithelium | 4.34e-16 | 83 |
somite | 1.13e-14 | 71 |
presomitic mesoderm | 1.13e-14 | 71 |
presumptive segmental plate | 1.13e-14 | 71 |
dermomyotome | 1.13e-14 | 71 |
trunk paraxial mesoderm | 1.13e-14 | 71 |
dense mesenchyme tissue | 1.86e-14 | 73 |
paraxial mesoderm | 3.15e-14 | 72 |
presumptive paraxial mesoderm | 3.15e-14 | 72 |
mesoderm | 6.00e-14 | 315 |
mesoderm-derived structure | 6.00e-14 | 315 |
presumptive mesoderm | 6.00e-14 | 315 |
epithelial vesicle | 1.85e-12 | 78 |
artery | 1.16e-11 | 42 |
arterial blood vessel | 1.16e-11 | 42 |
arterial system | 1.16e-11 | 42 |
connective tissue | 2.57e-11 | 371 |
systemic artery | 1.11e-10 | 33 |
systemic arterial system | 1.11e-10 | 33 |
trunk mesenchyme | 8.31e-10 | 122 |
unilaminar epithelium | 1.74e-08 | 148 |
splanchnic layer of lateral plate mesoderm | 4.64e-08 | 83 |
lateral plate mesoderm | 5.46e-08 | 203 |
mesenchyme | 6.78e-08 | 160 |
entire embryonic mesenchyme | 6.78e-08 | 160 |
tissue | 4.37e-07 | 773 |