FFCP PHASE1:Mm9::chr16:91548406..91548440,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:91548406..91548440,-|id=chr16:91548406..91548440,-|ontology_enrichment_celltype=CL:0000988!8.96e-12!32;CL:0002032!8.96e-12!32;CL:0000037!8.96e-12!32;CL:0000566!8.96e-12!32;CL:0000837!8.96e-12!32;CL:0000063!1.97e-10!66;CL:0002320!5.07e-09!46;CL:0000134!5.07e-09!46;CL:0000791!1.28e-07!9;CL:0000789!1.28e-07!9;CL:0002420!1.28e-07!9;CL:0002419!1.28e-07!9;CL:0000790!1.28e-07!9;CL:0000838!1.94e-07!12;CL:0002031!2.21e-07!25;CL:0000084!5.14e-07!11;CL:0000827!5.14e-07!11;CL:0000738!5.61e-07!17;CL:0002087!5.61e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,4.24e-14,32;CL:0002032,4.24e-14,32;CL:0000037,4.24e-14,32;CL:0000837,4.24e-14,32;CL:0002563,2.08e-12,9;CL:0002251,2.08e-12,9;CL:0002320,2.30e-12,46;CL:0000134,2.30e-12,46;CL:0000791,2.89e-12,9;CL:0000789,2.89e-12,9;CL:0002420,2.89e-12,9;CL:0002419,2.89e-12,9;CL:0000790,2.89e-12,9;CL:0000723,1.37e-11,91;CL:0000048,1.37e-11,91;CL:0002250,7.66e-11,3;CL:0000034,1.30e-10,97;CL:0000219,4.28e-10,54;CL:0000624,5.02e-10,8;CL:0000084,6.23e-10,11;CL:0000827,6.23e-10,11;CL:0000838,4.68e-09,12;CL:0000738,2.49e-08,17;CL:0002087,2.49e-08,17;CL:0000542,2.58e-08,13;CL:0000051,2.58e-08,13;CL:0000557,2.26e-07,7;CL:0002076,3.29e-07,15;CL:0000049,3.34e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.63e-11,3;DOID:4045,2.63e-11,3|ontology_enrichment_uberon=UBERON:0002384!5.07e-09!46;UBERON:0002390!4.33e-07!45;UBERON:0003061!4.33e-07!45;UBERON:0002193!4.53e-07!48;UBERON:0002371!8.07e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.08e-12,9;UBERON:0004808,2.08e-12,9;UBERON:0001277,2.08e-12,9;UBERON:0002384,2.30e-12,46;UBERON:0000485,4.78e-10,11;UBERON:0001242,2.07e-08,13;UBERON:0001262,2.07e-08,13;UBERON:0004786,2.07e-08,13;UBERON:0002204,2.16e-08,32;UBERON:0000344,3.29e-07,15|phase1_expression=0,0,0,1.51232105653415,3.00537437967808,0.671517087647559,1.16806320297763,2.96983643915625,1.267098499365,0.468129052643987,0.171217968225505,0,4.79362043807376,3.4093956943409,0,0.202475267389826,0.699561878128147,0,0.411343300817216,0,0,0.0992909512008853,0,0,0.68822784320151,0,0.430761996159075,0,0.190023419456374,0,0,0,0.61506478758457,0,4.04392267651784,3.82339684324532,7.9626048942324,16.3227335987394,8.5946887897618,7.32933241563318,29.4115744015507,13.6609096991689,11.6522484727477,0,0,0,0,0,0,0,0,0,0.167782606057736,6.5282592781021,1.00828139742739,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,2.8419204597844,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0.484875253135222,0,0,0,0.255457055208591,1.31796636956512,2.39961092397363,2.1601938602421,0,0,0,0.173824320192276,0,0,0,0,0,0.505445516867349,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,2.1066395619397,3.86021860672073,1.70498099637356,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0.575392274901621,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.341741761595705,0.206386867963223,0.925972636848558,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0.299033092087958,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr16:91548406..91548440,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:91548406..91548440,- | |||
|description=CAGE_peak_at_chr16:91548406..91548440,- | |||
|id=chr16:91548406..91548440,- | |||
|ontology_enrichment_celltype=CL:0000988!8.96e-12!32;CL:0002032!8.96e-12!32;CL:0000037!8.96e-12!32;CL:0000566!8.96e-12!32;CL:0000837!8.96e-12!32;CL:0000063!1.97e-10!66;CL:0002320!5.07e-09!46;CL:0000134!5.07e-09!46;CL:0000791!1.28e-07!9;CL:0000789!1.28e-07!9;CL:0002420!1.28e-07!9;CL:0002419!1.28e-07!9;CL:0000790!1.28e-07!9;CL:0000838!1.94e-07!12;CL:0002031!2.21e-07!25;CL:0000084!5.14e-07!11;CL:0000827!5.14e-07!11;CL:0000738!5.61e-07!17;CL:0002087!5.61e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.24e-14,32;CL:0002032,4.24e-14,32;CL:0000037,4.24e-14,32;CL:0000837,4.24e-14,32;CL:0002563,2.08e-12,9;CL:0002251,2.08e-12,9;CL:0002320,2.30e-12,46;CL:0000134,2.30e-12,46;CL:0000791,2.89e-12,9;CL:0000789,2.89e-12,9;CL:0002420,2.89e-12,9;CL:0002419,2.89e-12,9;CL:0000790,2.89e-12,9;CL:0000723,1.37e-11,91;CL:0000048,1.37e-11,91;CL:0002250,7.66e-11,3;CL:0000034,1.30e-10,97;CL:0000219,4.28e-10,54;CL:0000624,5.02e-10,8;CL:0000084,6.23e-10,11;CL:0000827,6.23e-10,11;CL:0000838,4.68e-09,12;CL:0000738,2.49e-08,17;CL:0002087,2.49e-08,17;CL:0000542,2.58e-08,13;CL:0000051,2.58e-08,13;CL:0000557,2.26e-07,7;CL:0002076,3.29e-07,15;CL:0000049,3.34e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.63e-11,3;DOID:4045,2.63e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.07e-09!46;UBERON:0002390!4.33e-07!45;UBERON:0003061!4.33e-07!45;UBERON:0002193!4.53e-07!48;UBERON:0002371!8.07e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.08e-12,9;UBERON:0004808,2.08e-12,9;UBERON:0001277,2.08e-12,9;UBERON:0002384,2.30e-12,46;UBERON:0000485,4.78e-10,11;UBERON:0001242,2.07e-08,13;UBERON:0001262,2.07e-08,13;UBERON:0004786,2.07e-08,13;UBERON:0002204,2.16e-08,32;UBERON:0000344,3.29e-07,15 | |||
|phase1_expression=0,0,0,1.51232105653415,3.00537437967808,0.671517087647559,1.16806320297763,2.96983643915625,1.267098499365,0.468129052643987,0.171217968225505,0,4.79362043807376,3.4093956943409,0,0.202475267389826,0.699561878128147,0,0.411343300817216,0,0,0.0992909512008853,0,0,0.68822784320151,0,0.430761996159075,0,0.190023419456374,0,0,0,0.61506478758457,0,4.04392267651784,3.82339684324532,7.9626048942324,16.3227335987394,8.5946887897618,7.32933241563318,29.4115744015507,13.6609096991689,11.6522484727477,0,0,0,0,0,0,0,0,0,0.167782606057736,6.5282592781021,1.00828139742739,0,0,0,0,0,0,0,0,1.3498495759221,0.988866362566974,2.8419204597844,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0.484875253135222,0,0,0,0.255457055208591,1.31796636956512,2.39961092397363,2.1601938602421,0,0,0,0.173824320192276,0,0,0,0,0,0.505445516867349,0.210441855886474,0,0,0,0.30140963567143,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,2.1066395619397,3.86021860672073,1.70498099637356,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0.660837565967596,0.528901133327089,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0.575392274901621,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,0.341741761595705,0.206386867963223,0.925972636848558,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0.388844919875379,0,0,0.299033092087958,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr16:91548406..91548440,- | |||
}} |
Latest revision as of 04:51, 4 August 2015
Short description: | p@chr16:91548406..91548440, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:91548406..91548440, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.24e-14 | 32 |
hematopoietic oligopotent progenitor cell | 4.24e-14 | 32 |
hematopoietic stem cell | 4.24e-14 | 32 |
hematopoietic multipotent progenitor cell | 4.24e-14 | 32 |
intestinal epithelial cell | 2.08e-12 | 9 |
epithelial cell of alimentary canal | 2.08e-12 | 9 |
connective tissue cell | 2.30e-12 | 46 |
mesenchymal cell | 2.30e-12 | 46 |
mature alpha-beta T cell | 2.89e-12 | 9 |
alpha-beta T cell | 2.89e-12 | 9 |
immature T cell | 2.89e-12 | 9 |
mature T cell | 2.89e-12 | 9 |
immature alpha-beta T cell | 2.89e-12 | 9 |
somatic stem cell | 1.37e-11 | 91 |
multi fate stem cell | 1.37e-11 | 91 |
intestinal crypt stem cell | 7.66e-11 | 3 |
stem cell | 1.30e-10 | 97 |
motile cell | 4.28e-10 | 54 |
CD4-positive, alpha-beta T cell | 5.02e-10 | 8 |
T cell | 6.23e-10 | 11 |
pro-T cell | 6.23e-10 | 11 |
lymphoid lineage restricted progenitor cell | 4.68e-09 | 12 |
leukocyte | 2.49e-08 | 17 |
nongranular leukocyte | 2.49e-08 | 17 |
lymphocyte | 2.58e-08 | 13 |
common lymphoid progenitor | 2.58e-08 | 13 |
granulocyte monocyte progenitor cell | 2.26e-07 | 7 |
endo-epithelial cell | 3.29e-07 | 15 |
common myeloid progenitor | 3.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.08e-12 | 9 |
gastrointestinal system epithelium | 2.08e-12 | 9 |
intestinal epithelium | 2.08e-12 | 9 |
connective tissue | 2.30e-12 | 46 |
simple columnar epithelium | 4.78e-10 | 11 |
intestinal mucosa | 2.07e-08 | 13 |
wall of intestine | 2.07e-08 | 13 |
gastrointestinal system mucosa | 2.07e-08 | 13 |
musculoskeletal system | 2.16e-08 | 32 |
mucosa | 3.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.63e-11 | 3 |
muscle cancer | 2.63e-11 | 3 |