FFCP PHASE1:Mm9::chr16:91406066..91406089,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16155|HGNC=|MCL_coexpression_id=440|UniProt=E9Q294,Q3TU35|association_with_transcript=-319bp_to_ENSMUST00000156133,ENSMUST00000169076_5end|description=CAGE_peak_9_at_Il10rb_5end|id=chr16:91406066..91406089,+|ontology_enrichment_celltype=CL:0000988!1.84e-20!32;CL:0002032!1.84e-20!32;CL:0000037!1.84e-20!32;CL:0000566!1.84e-20!32;CL:0000837!1.84e-20!32;CL:0002320!2.22e-15!46;CL:0000134!2.22e-15!46;CL:0000838!2.41e-13!12;CL:0002031!5.16e-13!25;CL:0000219!3.56e-12!54;CL:0000542!3.87e-12!13;CL:0000051!3.87e-12!13;CL:0000063!4.80e-12!66;CL:0000791!1.20e-11!9;CL:0000789!1.20e-11!9;CL:0002420!1.20e-11!9;CL:0002419!1.20e-11!9;CL:0000790!1.20e-11!9;CL:0000084!1.33e-11!11;CL:0000827!1.33e-11!11;CL:0000624!5.22e-10!8;CL:0000893!6.80e-10!6;CL:0002489!6.80e-10!6;CL:0000898!6.80e-10!6;CL:0000809!6.80e-10!6;CL:0000810!6.80e-10!6;CL:0000895!6.80e-10!6;CL:0000808!6.80e-10!6;CL:0000894!6.80e-10!6;CL:0000806!6.80e-10!6;CL:0000807!6.80e-10!6;CL:0000805!6.80e-10!6;CL:0002425!6.80e-10!6;CL:0002436!6.80e-10!6;CL:0002427!6.80e-10!6;CL:0002428!6.80e-10!6;CL:0002429!6.80e-10!6;CL:0002433!6.80e-10!6;CL:0002431!6.80e-10!6;CL:0002432!6.80e-10!6;CL:0000049!8.94e-10!19;CL:0000738!9.55e-09!17;CL:0002087!9.55e-09!17;CL:0000034!7.34e-08!97;CL:0000144!8.30e-07!121;CL:0000012!8.30e-07!121|ontology_enrichment_celltype_v019_2=CL:0000838,1.19e-16,12;CL:0000988,1.90e-15,32;CL:0002032,1.90e-15,32;CL:0000037,1.90e-15,32;CL:0000837,1.90e-15,32;CL:0000542,2.22e-15,13;CL:0000051,2.22e-15,13;CL:0000791,2.72e-14,9;CL:0000789,2.72e-14,9;CL:0002420,2.72e-14,9;CL:0002419,2.72e-14,9;CL:0000790,2.72e-14,9;CL:0000738,8.77e-12,17;CL:0002087,8.77e-12,17;CL:0000084,9.30e-12,11;CL:0000827,9.30e-12,11;CL:0002320,1.35e-10,46;CL:0000134,1.35e-10,46;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000624,1.51e-09,8;CL:0000815,4.39e-09,1;CL:0000792,4.39e-09,1;CL:0000219,6.07e-09,54;CL:0000625,6.33e-09,1;CL:0002031,5.06e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.78e-16!48;UBERON:0002390!4.61e-16!45;UBERON:0003061!4.61e-16!45;UBERON:0002384!2.22e-15!46;UBERON:0004177!1.16e-10!29;UBERON:0002405!4.16e-10!70;UBERON:0003081!2.76e-08!88;UBERON:0002370!1.30e-07!23;UBERON:0000974!1.30e-07!23;UBERON:0004807!1.30e-07!23;UBERON:0005058!1.30e-07!23;UBERON:0003351!1.30e-07!23;UBERON:0009113!1.30e-07!23;UBERON:0003295!1.30e-07!23;UBERON:0009722!1.30e-07!23;UBERON:0005562!1.30e-07!23;UBERON:0007690!1.30e-07!23;UBERON:0000072!2.80e-07!27;UBERON:0006562!3.43e-07!24;UBERON:0003408!3.43e-07!24;UBERON:0001557!3.43e-07!24;UBERON:0001042!3.43e-07!24;UBERON:0008814!3.43e-07!24;UBERON:0009145!3.43e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.35e-10,46|phase1_expression=0,0.348975407639361,0,0,0,0,0,1.16210991097419,1.83025338797167,2.80877431586392,0.171217968225505,0.239316476986009,0.171200729931206,0.262261207256992,0,0.404950534779652,0,0.946386496074713,0.685572168028694,0.84877930359606,0.0850432901510698,0.297872853602656,0,0,0,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0.7813353445238,0,2.94115744015507,3.41522742479223,0,0,0,0,0,0,0,0,0,0,9.56360854529097,0,1.00828139742739,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,2.99951365496704,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0.686334519619568,1.5298058699447,0.979660166265606,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@Il10rb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16155 | |||
|HGNC= | |||
|MCL_coexpression_id=440 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q294,uniprot:Q3TU35 | |||
|association_with_transcript=-319bp_to_ENSMUST00000156133,ENSMUST00000169076_5end | |||
|cluster_id=chr16:91406066..91406089,+ | |||
|description=CAGE_peak_9_at_Il10rb_5end | |||
|id=chr16:91406066..91406089,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.84e-20!32;CL:0002032!1.84e-20!32;CL:0000037!1.84e-20!32;CL:0000566!1.84e-20!32;CL:0000837!1.84e-20!32;CL:0002320!2.22e-15!46;CL:0000134!2.22e-15!46;CL:0000838!2.41e-13!12;CL:0002031!5.16e-13!25;CL:0000219!3.56e-12!54;CL:0000542!3.87e-12!13;CL:0000051!3.87e-12!13;CL:0000063!4.80e-12!66;CL:0000791!1.20e-11!9;CL:0000789!1.20e-11!9;CL:0002420!1.20e-11!9;CL:0002419!1.20e-11!9;CL:0000790!1.20e-11!9;CL:0000084!1.33e-11!11;CL:0000827!1.33e-11!11;CL:0000624!5.22e-10!8;CL:0000893!6.80e-10!6;CL:0002489!6.80e-10!6;CL:0000898!6.80e-10!6;CL:0000809!6.80e-10!6;CL:0000810!6.80e-10!6;CL:0000895!6.80e-10!6;CL:0000808!6.80e-10!6;CL:0000894!6.80e-10!6;CL:0000806!6.80e-10!6;CL:0000807!6.80e-10!6;CL:0000805!6.80e-10!6;CL:0002425!6.80e-10!6;CL:0002436!6.80e-10!6;CL:0002427!6.80e-10!6;CL:0002428!6.80e-10!6;CL:0002429!6.80e-10!6;CL:0002433!6.80e-10!6;CL:0002431!6.80e-10!6;CL:0002432!6.80e-10!6;CL:0000049!8.94e-10!19;CL:0000738!9.55e-09!17;CL:0002087!9.55e-09!17;CL:0000034!7.34e-08!97;CL:0000144!8.30e-07!121;CL:0000012!8.30e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.19e-16,12;CL:0000988,1.90e-15,32;CL:0002032,1.90e-15,32;CL:0000037,1.90e-15,32;CL:0000837,1.90e-15,32;CL:0000542,2.22e-15,13;CL:0000051,2.22e-15,13;CL:0000791,2.72e-14,9;CL:0000789,2.72e-14,9;CL:0002420,2.72e-14,9;CL:0002419,2.72e-14,9;CL:0000790,2.72e-14,9;CL:0000738,8.77e-12,17;CL:0002087,8.77e-12,17;CL:0000084,9.30e-12,11;CL:0000827,9.30e-12,11;CL:0002320,1.35e-10,46;CL:0000134,1.35e-10,46;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000624,1.51e-09,8;CL:0000815,4.39e-09,1;CL:0000792,4.39e-09,1;CL:0000219,6.07e-09,54;CL:0000625,6.33e-09,1;CL:0002031,5.06e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.78e-16!48;UBERON:0002390!4.61e-16!45;UBERON:0003061!4.61e-16!45;UBERON:0002384!2.22e-15!46;UBERON:0004177!1.16e-10!29;UBERON:0002405!4.16e-10!70;UBERON:0003081!2.76e-08!88;UBERON:0002370!1.30e-07!23;UBERON:0000974!1.30e-07!23;UBERON:0004807!1.30e-07!23;UBERON:0005058!1.30e-07!23;UBERON:0003351!1.30e-07!23;UBERON:0009113!1.30e-07!23;UBERON:0003295!1.30e-07!23;UBERON:0009722!1.30e-07!23;UBERON:0005562!1.30e-07!23;UBERON:0007690!1.30e-07!23;UBERON:0000072!2.80e-07!27;UBERON:0006562!3.43e-07!24;UBERON:0003408!3.43e-07!24;UBERON:0001557!3.43e-07!24;UBERON:0001042!3.43e-07!24;UBERON:0008814!3.43e-07!24;UBERON:0009145!3.43e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.35e-10,46 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,1.16210991097419,1.83025338797167,2.80877431586392,0.171217968225505,0.239316476986009,0.171200729931206,0.262261207256992,0,0.404950534779652,0,0.946386496074713,0.685572168028694,0.84877930359606,0.0850432901510698,0.297872853602656,0,0,0,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0.7813353445238,0,2.94115744015507,3.41522742479223,0,0,0,0,0,0,0,0,0,0,9.56360854529097,0,1.00828139742739,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,2.99951365496704,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0.686334519619568,1.5298058699447,0.979660166265606,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.25984164595559,0.358053391334963,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@Il10rb | |||
}} |
Revision as of 04:37, 4 August 2015
Short description: | p9@Il10rb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Il10rb_5end |
Coexpression cluster: | MCL_coexpression_mm9:440 |
Association with transcript: | -319bp_to_ENSMUST00000156133, ENSMUST00000169076_5end |
EntrezGene: | 16155 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.19e-16 | 12 |
hematopoietic cell | 1.90e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.90e-15 | 32 |
hematopoietic stem cell | 1.90e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.90e-15 | 32 |
lymphocyte | 2.22e-15 | 13 |
common lymphoid progenitor | 2.22e-15 | 13 |
mature alpha-beta T cell | 2.72e-14 | 9 |
alpha-beta T cell | 2.72e-14 | 9 |
immature T cell | 2.72e-14 | 9 |
mature T cell | 2.72e-14 | 9 |
immature alpha-beta T cell | 2.72e-14 | 9 |
leukocyte | 8.77e-12 | 17 |
nongranular leukocyte | 8.77e-12 | 17 |
T cell | 9.30e-12 | 11 |
pro-T cell | 9.30e-12 | 11 |
connective tissue cell | 1.35e-10 | 46 |
mesenchymal cell | 1.35e-10 | 46 |
lymphocyte of B lineage | 9.82e-10 | 1 |
B cell | 9.82e-10 | 1 |
pro-B cell | 9.82e-10 | 1 |
CD4-positive, alpha-beta T cell | 1.51e-09 | 8 |
regulatory T cell | 4.39e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.39e-09 | 1 |
motile cell | 6.07e-09 | 54 |
CD8-positive, alpha-beta T cell | 6.33e-09 | 1 |
hematopoietic lineage restricted progenitor cell | 5.06e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.35e-10 | 46 |