FFCP PHASE1:Mm9::chr16:81200909..81200925,+: Difference between revisions
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{{FFCP|EntrezGene=17968|HGNC=|MCL_coexpression_id=1|UniProt=O35136,Q71VC5|association_with_transcript=-16bp_to_ENSMUST00000037785,ENSMUST00000067602,NM_001113208,NM_010954,uc007zta.2,uc007ztb.2_5end|description=CAGE_peak_2_at_Ncam2_5end|id=chr16:81200909..81200925,+|ontology_enrichment_celltype=CL:0000540!2.79e-13!33;CL:0000047!2.79e-13!33;CL:0000031!2.79e-13!33;CL:0000404!2.79e-13!33;CL:0000221!2.15e-12!44;CL:0000133!2.15e-12!44;CL:0002319!7.73e-12!43;CL:0000117!3.75e-10!23;CL:0000337!3.75e-10!23;CL:0000393!7.36e-10!39;CL:0000211!7.36e-10!39;CL:0000055!1.02e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.39e-11,23;CL:0000337,3.39e-11,23;CL:0000540,9.47e-11,33;CL:0000047,9.47e-11,33;CL:0000031,9.47e-11,33;CL:0000404,9.47e-11,33;CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0000393,2.94e-08,39;CL:0000211,2.94e-08,39;CL:0002319,7.24e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.24e-30!102;UBERON:0000924!1.24e-30!102;UBERON:0006601!1.24e-30!102;UBERON:0000073!3.91e-30!75;UBERON:0001016!3.91e-30!75;UBERON:0001017!4.12e-30!73;UBERON:0005743!4.12e-30!73;UBERON:0002346!7.37e-25!71;UBERON:0003075!7.37e-25!71;UBERON:0007284!7.37e-25!71;UBERON:0000033!1.67e-21!63;UBERON:0001049!5.98e-21!52;UBERON:0005068!5.98e-21!52;UBERON:0006241!5.98e-21!52;UBERON:0007135!5.98e-21!52;UBERON:0000955!1.97e-19!50;UBERON:0006238!1.97e-19!50;UBERON:0002616!8.92e-19!49;UBERON:0003056!1.31e-17!49;UBERON:0002020!1.18e-16!34;UBERON:0003080!6.07e-16!40;UBERON:0002780!3.24e-15!39;UBERON:0001890!3.24e-15!39;UBERON:0006240!3.24e-15!39;UBERON:0002791!2.21e-13!29;UBERON:0003528!2.21e-13!29;UBERON:0001893!2.21e-13!29;UBERON:0007811!5.08e-10!86;UBERON:0000153!1.19e-09!94;UBERON:0002619!3.93e-09!17;UBERON:0002021!4.80e-09!10;UBERON:0000411!4.80e-09!10;UBERON:0001950!4.80e-09!10;UBERON:0000956!6.61e-09!21;UBERON:0001869!6.61e-09!21;UBERON:0000203!6.61e-09!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.07e-36,73;UBERON:0001016,7.13e-35,75;UBERON:0000073,1.87e-34,54;UBERON:0001049,2.76e-32,52;UBERON:0005068,2.76e-32,52;UBERON:0006241,2.76e-32,52;UBERON:0007135,2.76e-32,52;UBERON:0002346,1.85e-28,64;UBERON:0003075,1.85e-28,64;UBERON:0007284,1.85e-28,64;UBERON:0004121,4.18e-27,95;UBERON:0000924,4.18e-27,95;UBERON:0006601,4.18e-27,95;UBERON:0000955,2.63e-26,47;UBERON:0006238,2.63e-26,47;UBERON:0002616,3.36e-25,46;UBERON:0010371,7.76e-25,73;UBERON:0002020,3.98e-23,34;UBERON:0003080,2.16e-22,40;UBERON:0002780,3.67e-21,39;UBERON:0001890,3.67e-21,39;UBERON:0006240,3.67e-21,39;UBERON:0003056,5.96e-18,49;UBERON:0003528,1.50e-17,29;UBERON:0002791,1.50e-17,29;UBERON:0001893,1.50e-17,29;UBERON:0010314,5.01e-17,92;UBERON:0002021,4.95e-15,10;UBERON:0000411,4.95e-15,10;UBERON:0001950,4.95e-15,10;UBERON:0002619,3.66e-11,17;UBERON:0003076,3.01e-10,12;UBERON:0003057,3.01e-10,12;UBERON:0000956,4.43e-10,21;UBERON:0001869,4.43e-10,21;UBERON:0000203,4.43e-10,21;UBERON:0002420,2.16e-09,8;UBERON:0007245,2.16e-09,8;UBERON:0010009,2.16e-09,8;UBERON:0010011,2.16e-09,8;UBERON:0000454,2.16e-09,8;UBERON:0000025,4.92e-09,114;UBERON:0002240,1.89e-08,6;UBERON:0005174,1.89e-08,6;UBERON:0001137,1.89e-08,6;UBERON:0004111,2.03e-08,122;UBERON:0001948,3.53e-07,5;UBERON:0002315,3.53e-07,5|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,2.22548106945558,0.528990979272033,5.70448263155561,0,0,0,0,0,0.898800331555214,0.384218305321555,0.622137673850866,0.135005938331691,0,4.28476476605705,4.19650227808066,0.734944795289724,0.191690942036473,0.919218786610021,2.20231761998777,7.66124028511126,6.75868746327471,1.97829431595291,1.09785172322892,2.08365348222704,2.51264699101243,6.75315132038016,7.63991238884051,9.72274332063103,9.39653093274079,2.98239113320481,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,1.29955283489534,0,0.421333260395256,0,0,0,3.23939865486365,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.904335843315735,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0,0,0,0,2.34224637609238,4.1889341362691,0,0,0,0,11.0845073159569,9.60751265919116,2.63874139437015,15.1227158567281,17.9000820131231,9.3504620051802,10.058958310201,0.407357455401265,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,0.680364991513279,0.2562274405697,0.562210347358373,1.81092359517311,0,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,11.7762371195911,2.77842453424068,0,0,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,8.50918126935297,8.32202974804643,0,0,1.26203287766503,0.390438744296638,2.80050417052639,0.238968797952552,0.445597348164788,0.849229592366497,2.02405350837447,0.876767573733936,1.18586333383957,4.81981974632711,0.141940085208269,0,0.651547837414304,0,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0,0,0,1.02131881726136,0,0,1.07168517515796,1.59606210278046,1.07021290561242,1.64549020602121,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0.328281799490123,0,10.5692422145991,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.216010681643603,0,0.87345025498471,0,0.247960367176008,0.26175594198403,0,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,14.1187960654267,8.28585425712918,14.3223878359849,18.2164373284309,10.9613203163303,11.3309084608455,14.1754725048679,11.7083512838297,14.0474146785103,10.8729665467882,0.103787347584177,0,0.170733605754134,1.45864030240976,0.628839487883947,0.367687016900028,0.44449345560323,2.26638562962784,0.64183841918363,0.758091635291392,0.760437899670719,1.13175804831646,1.03005658216871,1.21647789569252,1.09127391015665,1.42888107384922,1.39061191133827,1.15745532278223,0.824171801606613,0.883193520806384,0.342869252385415,1.77475806159337,1.43061713968393,1.16277133305863,1.12931256498397,1.26921911837515,0.548783918618318,1.31534855718921,0.814824683075171,0,1.18635018124174,1.0835493061312,0.818462086339379,1.85924209423159,0.385813221962283,0.249810577937946,0.467863216890817,1.50409737833809,0.382576664137687,0.441182838239031,0.927471342481686|short_description=p2@Ncam2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17968 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35136,uniprot:Q71VC5 | |||
|association_with_transcript=-16bp_to_ENSMUST00000037785,ENSMUST00000067602,NM_001113208,NM_010954,uc007zta.2,uc007ztb.2_5end | |||
|cluster_id=chr16:81200909..81200925,+ | |||
|description=CAGE_peak_2_at_Ncam2_5end | |||
|id=chr16:81200909..81200925,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.79e-13!33;CL:0000047!2.79e-13!33;CL:0000031!2.79e-13!33;CL:0000404!2.79e-13!33;CL:0000221!2.15e-12!44;CL:0000133!2.15e-12!44;CL:0002319!7.73e-12!43;CL:0000117!3.75e-10!23;CL:0000337!3.75e-10!23;CL:0000393!7.36e-10!39;CL:0000211!7.36e-10!39;CL:0000055!1.02e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.39e-11,23;CL:0000337,3.39e-11,23;CL:0000540,9.47e-11,33;CL:0000047,9.47e-11,33;CL:0000031,9.47e-11,33;CL:0000404,9.47e-11,33;CL:0000221,1.47e-08,44;CL:0000133,1.47e-08,44;CL:0000393,2.94e-08,39;CL:0000211,2.94e-08,39;CL:0002319,7.24e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.24e-30!102;UBERON:0000924!1.24e-30!102;UBERON:0006601!1.24e-30!102;UBERON:0000073!3.91e-30!75;UBERON:0001016!3.91e-30!75;UBERON:0001017!4.12e-30!73;UBERON:0005743!4.12e-30!73;UBERON:0002346!7.37e-25!71;UBERON:0003075!7.37e-25!71;UBERON:0007284!7.37e-25!71;UBERON:0000033!1.67e-21!63;UBERON:0001049!5.98e-21!52;UBERON:0005068!5.98e-21!52;UBERON:0006241!5.98e-21!52;UBERON:0007135!5.98e-21!52;UBERON:0000955!1.97e-19!50;UBERON:0006238!1.97e-19!50;UBERON:0002616!8.92e-19!49;UBERON:0003056!1.31e-17!49;UBERON:0002020!1.18e-16!34;UBERON:0003080!6.07e-16!40;UBERON:0002780!3.24e-15!39;UBERON:0001890!3.24e-15!39;UBERON:0006240!3.24e-15!39;UBERON:0002791!2.21e-13!29;UBERON:0003528!2.21e-13!29;UBERON:0001893!2.21e-13!29;UBERON:0007811!5.08e-10!86;UBERON:0000153!1.19e-09!94;UBERON:0002619!3.93e-09!17;UBERON:0002021!4.80e-09!10;UBERON:0000411!4.80e-09!10;UBERON:0001950!4.80e-09!10;UBERON:0000956!6.61e-09!21;UBERON:0001869!6.61e-09!21;UBERON:0000203!6.61e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.07e-36,73;UBERON:0001016,7.13e-35,75;UBERON:0000073,1.87e-34,54;UBERON:0001049,2.76e-32,52;UBERON:0005068,2.76e-32,52;UBERON:0006241,2.76e-32,52;UBERON:0007135,2.76e-32,52;UBERON:0002346,1.85e-28,64;UBERON:0003075,1.85e-28,64;UBERON:0007284,1.85e-28,64;UBERON:0004121,4.18e-27,95;UBERON:0000924,4.18e-27,95;UBERON:0006601,4.18e-27,95;UBERON:0000955,2.63e-26,47;UBERON:0006238,2.63e-26,47;UBERON:0002616,3.36e-25,46;UBERON:0010371,7.76e-25,73;UBERON:0002020,3.98e-23,34;UBERON:0003080,2.16e-22,40;UBERON:0002780,3.67e-21,39;UBERON:0001890,3.67e-21,39;UBERON:0006240,3.67e-21,39;UBERON:0003056,5.96e-18,49;UBERON:0003528,1.50e-17,29;UBERON:0002791,1.50e-17,29;UBERON:0001893,1.50e-17,29;UBERON:0010314,5.01e-17,92;UBERON:0002021,4.95e-15,10;UBERON:0000411,4.95e-15,10;UBERON:0001950,4.95e-15,10;UBERON:0002619,3.66e-11,17;UBERON:0003076,3.01e-10,12;UBERON:0003057,3.01e-10,12;UBERON:0000956,4.43e-10,21;UBERON:0001869,4.43e-10,21;UBERON:0000203,4.43e-10,21;UBERON:0002420,2.16e-09,8;UBERON:0007245,2.16e-09,8;UBERON:0010009,2.16e-09,8;UBERON:0010011,2.16e-09,8;UBERON:0000454,2.16e-09,8;UBERON:0000025,4.92e-09,114;UBERON:0002240,1.89e-08,6;UBERON:0005174,1.89e-08,6;UBERON:0001137,1.89e-08,6;UBERON:0004111,2.03e-08,122;UBERON:0001948,3.53e-07,5;UBERON:0002315,3.53e-07,5 | |||
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|short_description=p2@Ncam2 | |||
}} |
Revision as of 02:34, 4 August 2015
Short description: | p2@Ncam2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ncam2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -16bp_to_ENSMUST00000037785, ENSMUST00000067602, NM_001113208, NM_010954, uc007zta.2, uc007ztb.2_5end |
EntrezGene: | 17968 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.39e-11 | 23 |
neuron | 9.47e-11 | 33 |
neuronal stem cell | 9.47e-11 | 33 |
neuroblast | 9.47e-11 | 33 |
electrically signaling cell | 9.47e-11 | 33 |
ectodermal cell | 1.47e-08 | 44 |
neurectodermal cell | 1.47e-08 | 44 |
electrically responsive cell | 2.94e-08 | 39 |
electrically active cell | 2.94e-08 | 39 |
neural cell | 7.24e-08 | 43 |