FFCP PHASE1:Hg19::chr5:118604403..118604434,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=strong | |||
|UniProt=O95379 | |||
|association_with_transcript=0bp_to_NM_001077654,uc003ksf.1,uc003ksg.2_5end | |||
|coexpression_cluster_id=C3020 | |||
|description=CAGE_peak_4_at_TNFAIP8_5end | |||
|id=chr5:118604403..118604434,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.96e-34!172;CL:0000566!3.96e-34!172;CL:0002032!1.58e-32!165;CL:0000837!1.58e-32!165;CL:0000738!4.04e-31!140;CL:0002087!4.17e-31!119;CL:0000988!2.99e-30!182;CL:0002031!1.47e-28!124;CL:0000542!2.48e-22!53;CL:0000051!2.48e-22!53;CL:0000838!8.41e-22!52;CL:0000084!8.22e-14!25;CL:0000827!8.22e-14!25;CL:0000763!1.63e-12!112;CL:0000049!1.63e-12!112;CL:0000791!3.60e-11!18;CL:0000789!3.60e-11!18;CL:0002420!3.60e-11!18;CL:0002419!3.60e-11!18;CL:0000790!3.60e-11!18;CL:0002194!2.23e-09!63;CL:0000576!2.23e-09!63;CL:0000040!2.23e-09!63;CL:0000559!2.23e-09!63;CL:0000839!2.40e-09!70;CL:0002009!2.89e-09!65;CL:0000766!4.50e-09!76;CL:0000557!4.93e-09!71;CL:0002057!1.34e-08!42;CL:0000236!1.77e-08!14;CL:0000860!2.62e-08!45;CL:0000945!2.91e-08!24;CL:0000826!2.91e-08!24;CL:0002320!8.19e-08!365;CL:0000625!1.06e-07!11;CL:0000134!1.39e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.24e-14;25!CL:0000542;1.42e-14;53!CL:0000791;9.12e-12;18!CL:0000789;9.12e-12;18!CL:0002419;9.12e-12;18!CL:0002087;3.19e-10;104!CL:0000236;1.32e-09;13!CL:0000945;1.18e-08;24!CL:0000625;4.26e-08;11!CL:0000738;1.43e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.55e-35,168;CL:0002032,1.14e-33,161;CL:0000837,1.14e-33,161;CL:0000738,3.11e-32,136;CL:0002087,9.34e-32,115;CL:0000988,1.95e-31,177;CL:0002031,4.26e-29,120;CL:0000542,1.79e-23,53;CL:0000051,1.79e-23,53;CL:0000838,6.50e-23,52;CL:0000084,1.75e-14,25;CL:0000827,1.75e-14,25;CL:0000763,1.21e-12,108;CL:0000049,1.21e-12,108;CL:0000791,1.07e-11,18;CL:0000789,1.07e-11,18;CL:0002420,1.07e-11,18;CL:0002419,1.07e-11,18;CL:0000790,1.07e-11,18;CL:0000766,4.64e-09,72;CL:0002194,5.16e-09,59;CL:0000576,5.16e-09,59;CL:0000040,5.16e-09,59;CL:0000559,5.16e-09,59;CL:0000839,5.19e-09,66;CL:0002009,6.73e-09,61;CL:0000236,7.39e-09,14;CL:0000473,9.75e-09,48;CL:0000234,9.75e-09,48;CL:0000557,1.09e-08,67;CL:0000945,1.25e-08,24;CL:0000826,1.25e-08,24;CL:0000860,1.34e-08,42;CL:0002057,1.34e-08,42;CL:0000625,4.85e-08,11;CL:0002320,7.82e-08,361;CL:0000134,1.51e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.42e-14;53!CL:0000790;9.12e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!2.62e-08!51;DOID:0060083!2.62e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.15e-08,51;DOID:0060083,1.15e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.90e-14!102;UBERON:0003061!2.90e-14!102;UBERON:0002193!6.44e-13!112;UBERON:0002371!6.34e-08!80;UBERON:0002384!1.04e-07!375;UBERON:0004765!5.23e-07!101;UBERON:0001434!5.23e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.46e-14,98;UBERON:0003061,4.46e-14,98;UBERON:0002193,7.69e-13,108;UBERON:0002405,3.33e-09,93;UBERON:0002384,9.71e-08,371;UBERON:0002371,1.18e-07,76;UBERON:0004765,1.61e-07,90 | |||
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| |||
|short_description=p4@TNFAIP8 | |||
}} |
Revision as of 07:01, 22 January 2014
Short description: | p4@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFAIP8_5end |
Coexpression cluster: | C3020_thymus_CD19_CD8_CD4_lymph_blood_vein |
Association with transcript: | 0bp_to_NM_001077654, uc003ksf.1, uc003ksg.2_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.46e-14 | 98 |
blood island | 4.46e-14 | 98 |
hemolymphoid system | 7.69e-13 | 108 |
immune system | 3.33e-09 | 93 |
connective tissue | 9.71e-08 | 371 |
bone marrow | 1.18e-07 | 76 |
skeletal element | 1.61e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.15e-08 | 51 |
immune system cancer | 1.15e-08 | 51 |