FFCP PHASE1:Mm9::chr16:38362291..38362316,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=64082|HGNC=|MCL_coexpression_id=19|UniProt=Q6P3F7,Q9ES82|association_with_transcript=0bp_to_ENSMUST00000023494,NM_022318_5end|description=CAGE_peak_1_at_Popdc2_5end|id=chr16:38362291..38362316,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.94e-13!18;UBERON:0000948!2.94e-13!18;UBERON:0005498!2.94e-13!18;UBERON:0004140!2.94e-13!18;UBERON:0009881!2.94e-13!18;UBERON:0004141!2.94e-13!18;UBERON:0003084!2.94e-13!18;UBERON:0007005!2.94e-13!18;UBERON:0004139!2.94e-13!18;UBERON:0004291!2.94e-13!18;UBERON:0004535!8.28e-12!23;UBERON:0001009!8.28e-12!23;UBERON:0004872!2.78e-09!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.67e-15,18;UBERON:0000948,2.67e-15,18;UBERON:0005498,2.67e-15,18;UBERON:0004140,2.67e-15,18;UBERON:0009881,2.67e-15,18;UBERON:0004141,2.67e-15,18;UBERON:0003084,2.67e-15,18;UBERON:0007005,2.67e-15,18;UBERON:0004139,2.67e-15,18;UBERON:0004291,2.67e-15,18;UBERON:0004535,1.43e-11,23;UBERON:0001009,1.43e-11,23;UBERON:0004872,5.05e-08,33|phase1_expression=1.28119077683835,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,4.88792928468299,10.3152038377952,49.5045208586345,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,12.6399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,1.55362730188303,0.29688427812965,0.173485326766136,0.913396434936424,1.15307748628029,0.150722640552623,0.823120949949934,0.879666139307728,3.46072954828123,12.4355446951124,7.07688441559899,16.1766849947409,13.471332626084,11.6370060752453,11.1835056730873,0,0,4.08731288333746,0,0,0,0,0,0,0,0.255715457330331,0,0,1.52759045775474,6.09594155989456,2.0217820674694,1.68353484709179,0,0.689706313300419,0.180062129805349,0.753524089178575,1.15662048557257,1.2811372028485,1.3118241438362,1.81092359517311,0,1.13463648100692,0.703804496655795,2.41115305670332,1.39023624612799,1.39300866608867,0.205782136407943,0,0,0,0,140.43127377907,157.366986247316,142.429090615663,139.916138730859,190.861304794982,184.657734126192,272.529783247478,303.14894358157,425.609672928333,423.083374127558,392.031904220879,397.966786060606,376.318767632805,334.37482558827,311.224685105302,0,0,0,4.49565963328025,1.49301775374664,3.94802342162745,5.54130083685001,4.23535401709019,4.44756087689741,10.0819581839656,12.3377556001573,8.56434564564857,7.28872105520782,8.95304124185179,11.5028811400281,7.19055526923377,9.29393614461185,6.77080329064848,0.189667900953082,0.456994050438915,0,3.86937522906097,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0.246794327843601,0.296452627087149,4.33797274861845,0.589676985339609,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0.717589654087649,0,8.12914036733061,10.2325362356062,3.7481944581666,4.75286240170527,0.938760993154008,5.69521275302174,5.2369600994923,3.70753930929818,4.72905432318573,4.20782910332672,5.89982644032702,7.53771247692395,10.3610989119537,7.5217510462386,0,0,1.96705709207614,2.48343071674259,0,0,0,56.3010167665752,0,0,0,0,0,0,0,0,0,0,4.82596289708113,1.24645922567079,1.62886959353576,11.5479086080775,0,0.728341908464944,0.906970670894253,0,0.590603785761546,0,2.06742634534577,0.363533729477506,1.06949213515416,5.37262488490887,0,0,0,0.18006109403131,0,0,0,0.535106452806212,0,0,2.11204537257339,2.1183207086382,2.42581237860458,4.45192882941996,4.52100394748536,2.35220407219808,1.90995750405018,1.80554989719567,8.45294426226567,0.370850604021019,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0.457556346413045,0,0,0,9.54670618015114,0.474503990371703,1.62655573701479,3.34816556547584,3.3454127362315,4.80397640241591,11.3286050963249,7.27350410382956,8.37619014348895,14.5168770086808,3.72803587852155,1.69107881605257,0,0,0,0,0.168956125490778,0.58678619322877,0.911430693907651,1.04859344425711,0.966336483304024,8.92893019399383,0.632022241256357,1.01362607645082,0,1.81889152168913,0,2.18549490259391,0.360586348559907,0.147689527174577,0.504832249740738,0.15241361331,0,0.194915761479505,0,0.233753804363138,11.1097887971454,0,0,0,85.9693693443247,15.5776454624481,5.86085197655248,3.42989406526505,5.517293144389,0,0,0,0,0,0,0,0,0,0,1.14166082342594,2.79317411380722,2.90247129782028,4.86213434136588,1.88651846365184,2.75765262675021,10.0011027510727,8.65347240403356,11.5530915453053,13.8983466470089,9.88569269571935,11.5062068245506,9.64507526939789,11.0123262136375,10.395819880966,10.4784612082276,9.85016770531272,11.767462448286,6.1812885120496,9.86232764900462,8.57173130963539,10.8260241757196,5.24559617884106,9.73820991436601,8.09340671571843,10.8306698101346,12.2561741824758,8.41823076601097,11.0001332215148,9.53941861818155,8.18581625056802,10.7369885789364,10.2307760792422,8.2116525828562,7.71626443924566,7.99393849401427,12.1644436391612,11.8179079726564,14.9204899013698,12.1325280515734,17.1582198359112|short_description=p1@Popdc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64082 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6P3F7,uniprot:Q9ES82 | |||
|association_with_transcript=0bp_to_ENSMUST00000023494,NM_022318_5end | |||
|cluster_id=chr16:38362291..38362316,+ | |||
|description=CAGE_peak_1_at_Popdc2_5end | |||
|id=chr16:38362291..38362316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.94e-13!18;UBERON:0000948!2.94e-13!18;UBERON:0005498!2.94e-13!18;UBERON:0004140!2.94e-13!18;UBERON:0009881!2.94e-13!18;UBERON:0004141!2.94e-13!18;UBERON:0003084!2.94e-13!18;UBERON:0007005!2.94e-13!18;UBERON:0004139!2.94e-13!18;UBERON:0004291!2.94e-13!18;UBERON:0004535!8.28e-12!23;UBERON:0001009!8.28e-12!23;UBERON:0004872!2.78e-09!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.67e-15,18;UBERON:0000948,2.67e-15,18;UBERON:0005498,2.67e-15,18;UBERON:0004140,2.67e-15,18;UBERON:0009881,2.67e-15,18;UBERON:0004141,2.67e-15,18;UBERON:0003084,2.67e-15,18;UBERON:0007005,2.67e-15,18;UBERON:0004139,2.67e-15,18;UBERON:0004291,2.67e-15,18;UBERON:0004535,1.43e-11,23;UBERON:0001009,1.43e-11,23;UBERON:0004872,5.05e-08,33 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,4.88792928468299,10.3152038377952,49.5045208586345,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,12.6399978118577,0,0,0,0,0,0,0,0,0,0,1.7127581957859,1.55362730188303,0.29688427812965,0.173485326766136,0.913396434936424,1.15307748628029,0.150722640552623,0.823120949949934,0.879666139307728,3.46072954828123,12.4355446951124,7.07688441559899,16.1766849947409,13.471332626084,11.6370060752453,11.1835056730873,0,0,4.08731288333746,0,0,0,0,0,0,0,0.255715457330331,0,0,1.52759045775474,6.09594155989456,2.0217820674694,1.68353484709179,0,0.689706313300419,0.180062129805349,0.753524089178575,1.15662048557257,1.2811372028485,1.3118241438362,1.81092359517311,0,1.13463648100692,0.703804496655795,2.41115305670332,1.39023624612799,1.39300866608867,0.205782136407943,0,0,0,0,140.43127377907,157.366986247316,142.429090615663,139.916138730859,190.861304794982,184.657734126192,272.529783247478,303.14894358157,425.609672928333,423.083374127558,392.031904220879,397.966786060606,376.318767632805,334.37482558827,311.224685105302,0,0,0,4.49565963328025,1.49301775374664,3.94802342162745,5.54130083685001,4.23535401709019,4.44756087689741,10.0819581839656,12.3377556001573,8.56434564564857,7.28872105520782,8.95304124185179,11.5028811400281,7.19055526923377,9.29393614461185,6.77080329064848,0.189667900953082,0.456994050438915,0,3.86937522906097,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0.246794327843601,0.296452627087149,4.33797274861845,0.589676985339609,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.252578877947112,0.717589654087649,0,8.12914036733061,10.2325362356062,3.7481944581666,4.75286240170527,0.938760993154008,5.69521275302174,5.2369600994923,3.70753930929818,4.72905432318573,4.20782910332672,5.89982644032702,7.53771247692395,10.3610989119537,7.5217510462386,0,0,1.96705709207614,2.48343071674259,0,0,0,56.3010167665752,0,0,0,0,0,0,0,0,0,0,4.82596289708113,1.24645922567079,1.62886959353576,11.5479086080775,0,0.728341908464944,0.906970670894253,0,0.590603785761546,0,2.06742634534577,0.363533729477506,1.06949213515416,5.37262488490887,0,0,0,0.18006109403131,0,0,0,0.535106452806212,0,0,2.11204537257339,2.1183207086382,2.42581237860458,4.45192882941996,4.52100394748536,2.35220407219808,1.90995750405018,1.80554989719567,8.45294426226567,0.370850604021019,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0.457556346413045,0,0,0,9.54670618015114,0.474503990371703,1.62655573701479,3.34816556547584,3.3454127362315,4.80397640241591,11.3286050963249,7.27350410382956,8.37619014348895,14.5168770086808,3.72803587852155,1.69107881605257,0,0,0,0,0.168956125490778,0.58678619322877,0.911430693907651,1.04859344425711,0.966336483304024,8.92893019399383,0.632022241256357,1.01362607645082,0,1.81889152168913,0,2.18549490259391,0.360586348559907,0.147689527174577,0.504832249740738,0.15241361331,0,0.194915761479505,0,0.233753804363138,11.1097887971454,0,0,0,85.9693693443247,15.5776454624481,5.86085197655248,3.42989406526505,5.517293144389,0,0,0,0,0,0,0,0,0,0,1.14166082342594,2.79317411380722,2.90247129782028,4.86213434136588,1.88651846365184,2.75765262675021,10.0011027510727,8.65347240403356,11.5530915453053,13.8983466470089,9.88569269571935,11.5062068245506,9.64507526939789,11.0123262136375,10.395819880966,10.4784612082276,9.85016770531272,11.767462448286,6.1812885120496,9.86232764900462,8.57173130963539,10.8260241757196,5.24559617884106,9.73820991436601,8.09340671571843,10.8306698101346,12.2561741824758,8.41823076601097,11.0001332215148,9.53941861818155,8.18581625056802,10.7369885789364,10.2307760792422,8.2116525828562,7.71626443924566,7.99393849401427,12.1644436391612,11.8179079726564,14.9204899013698,12.1325280515734,17.1582198359112 | |||
|short_description=p1@Popdc2 | |||
}} |
Revision as of 10:22, 6 August 2015
Short description: | p1@Popdc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Popdc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 0bp_to_ENSMUST00000023494, NM_022318_5end |
EntrezGene: | 64082 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.67e-15 | 18 |
heart | 2.67e-15 | 18 |
primitive heart tube | 2.67e-15 | 18 |
primary heart field | 2.67e-15 | 18 |
anterior lateral plate mesoderm | 2.67e-15 | 18 |
heart tube | 2.67e-15 | 18 |
heart primordium | 2.67e-15 | 18 |
cardiac mesoderm | 2.67e-15 | 18 |
cardiogenic plate | 2.67e-15 | 18 |
heart rudiment | 2.67e-15 | 18 |
cardiovascular system | 1.43e-11 | 23 |
circulatory system | 1.43e-11 | 23 |
splanchnic layer of lateral plate mesoderm | 5.05e-08 | 33 |