FFCP PHASE1:Hg19::chr4:88928893..88928902,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9009 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-481bp_to_ENST00000506727_5end | |||
|description=CAGE_peak_4_at_PKD2_5end | |||
|id=chr4:88928893..88928902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.57e-25;3!CL:0002615;4.03e-25;3!CL:0002334;4.11e-17;12!CL:0000136;1.71e-15;13!CL:0002581;1.32e-09;1!CL:0002616;1.32e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.03e-25,3;CL:0002579,3.03e-25,3;CL:0002334,3.86e-17,12;CL:0000136,1.56e-13,15;CL:0002581,9.44e-10,1;CL:0002616,1.21e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.77e-08!6;UBERON:0002358!6.77e-08!6;UBERON:0003684!6.77e-08!6;UBERON:0001178!6.77e-08!6;UBERON:0001049!1.56e-07!57;UBERON:0005068!1.56e-07!57;UBERON:0006241!1.56e-07!57;UBERON:0007135!1.56e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.28e-48;6!UBERON:0002358;1.28e-48;6!UBERON:0003684;1.28e-48;6!UBERON:0001178;1.28e-48;6!UBERON:0004457;2.61e-32;9!UBERON:0000042;2.61e-32;9!UBERON:0005406;1.75e-17;2!UBERON:0002021;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-48,6;UBERON:0002358,1.14e-48,6;UBERON:0003684,1.14e-48,6;UBERON:0001178,1.14e-48,6;UBERON:0004457,3.65e-24,12;UBERON:0000042,3.65e-24,12;UBERON:0005406,1.16e-17,2;UBERON:0002323,6.71e-08,46;UBERON:0002021,1.95e-07,5;UBERON:0004458,2.29e-07,49 | |||
|phase1_expression=1.81678379270557,0.214100523890983,2.39622486963151,5.00366491765652,1.78784437770915,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0.572471974262113,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.458426764241994,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.379891534993739,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.538168907066586,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0.558350568994769,0.506328996723799,0.487185025805993,0,0,0.161646056818812,1.06502877754984,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,1.14330573052231,0.112131084345361,0,0,0.387815147273333,0,0,2.12750493267896,0,0,0,0,0.428933980974443,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0.868687840005475,0,0.537182889719687,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,1.24782516918484,2.14114786556594,0.788512075169673,0.585707074963566,0.300946099727719,0,0,0,0.368738337083406,0.434418072340414,0,0.343143423810856,0,0,0,0,0,0,3.2254015016441,0.920771839728375,0.841980283299221,2.56278298511402,2.04682899626681,2.73451665944133,2.96836132889982,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0,0,0.262248829918848,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,1.3940745403212,0.308033580176089,0,0,0,0.143124886741991,0,0,0.762520775695299,0,0.42793898803392,0,0,0,0.54907405947211,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.294747123039363,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.28853842595289,0.0711418433484141,0,0,0.383010740264733,0.211673582723883,0,0.561594356226918,0.456469358066384,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,1.79323189425963,0,0,0,0,0.933118762985422,0,0,0.511572370226872,0,0,0,0.969332746095218,0.371072392647405,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.0769502585037971,0.455768223388005,0,0,0,0,0.274792780205587,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0.2249738915515,0.77380195455795,0.242998226632099,0,0.315222829196793,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0,0,0,1.72844298240254,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0.886068179966986,0,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0,0,0.302461847526478,0,0.295710299979268,0.159296767163702,0.449803112163605,0.155262956876259,0,0,0,0,1.14241563650639,1.22061219961398,0.181848659202559,0.107410557042488,0,0.796191777397232,1.20008329398946,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0.327130788511688,0,0,0.211312123358627,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0,0.109209638192014,0,0,0,0,0.954013051960256,0.0788617450012534,0,0,0.3062454773532,0.385375350578757,2.8339315265117,0,0,1.51243017733031,0.138314504928436,0.3229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| |||
|short_description=p4@PKD2 | |||
}} |
Revision as of 02:11, 22 January 2014
Short description: | p4@PKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PKD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -481bp_to_ENST00000506727_5end |
EntrezGene: | PKD2 |
HGNC: | 9009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.03e-25 | 3 |
omentum preadipocyte | 3.03e-25 | 3 |
preadipocyte | 3.86e-17 | 12 |
fat cell | 1.56e-13 | 15 |
perirenal preadipocyte | 9.44e-10 | 1 |
perirenal adipocyte cell | 1.21e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.14e-48 | 6 |
peritoneum | 1.14e-48 | 6 |
abdominal cavity | 1.14e-48 | 6 |
visceral peritoneum | 1.14e-48 | 6 |
cavity lining | 3.65e-24 | 12 |
serous membrane | 3.65e-24 | 12 |
perirenal fat | 1.16e-17 | 2 |
body cavity | 6.71e-08 | 46 |
occipital lobe | 1.95e-07 | 5 |
body cavity or lining | 2.29e-07 | 49 |