FFCP PHASE1:Hg19::chr4:2801321..2801334,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1047 | |||
|description=CAGE_peak_at_chr4:2801321..2801334,+ | |||
|id=chr4:2801321..2801334,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.42e-96!42;CL:0000860!4.43e-89!45;CL:0000766!2.56e-76!76;CL:0002194!1.30e-71!63;CL:0000576!1.30e-71!63;CL:0000040!1.30e-71!63;CL:0000559!1.30e-71!63;CL:0002009!4.88e-69!65;CL:0000839!3.11e-63!70;CL:0000557!3.60e-62!71;CL:0000763!4.23e-58!112;CL:0000049!4.23e-58!112;CL:0000738!1.44e-45!140;CL:0002087!7.82e-43!119;CL:0000037!6.52e-42!172;CL:0000566!6.52e-42!172;CL:0002032!2.98e-39!165;CL:0000837!2.98e-39!165;CL:0000988!9.98e-39!182;CL:0002031!4.22e-35!124;CL:0002393!5.55e-22!9;CL:0002397!5.55e-22!9;CL:0000134!6.07e-12!358;CL:0000094!1.40e-11!8;CL:0002320!2.01e-11!365;CL:0000219!1.32e-09!390;CL:0000081!3.49e-08!11;CL:0000875!3.83e-08!3;CL:0002396!3.83e-08!3;CL:0000842!6.70e-08!3;CL:0000048!1.81e-07!430;CL:0000723!3.61e-07!436;CL:0000034!8.74e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-65;33!CL:0002057;1.11e-65;33!CL:0000473;1.91e-51;39!CL:0000234;1.91e-51;39!CL:0000576;5.30e-50;48!CL:0000766;8.75e-36;69!CL:0000763;7.36e-16;100!CL:0000094;9.16e-14;8!CL:0002087;3.56e-13;104!CL:0002393;2.10e-12;6!CL:0002397;2.10e-12;6!CL:0000738;1.77e-11;136!CL:0000771;6.05e-10;2!CL:0000081;6.28e-10;11!CL:0000775;4.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.27e-91,42;CL:0002057,5.27e-91,42;CL:0000473,5.19e-84,48;CL:0000234,5.19e-84,48;CL:0000766,7.56e-73,72;CL:0002194,9.66e-66,59;CL:0000576,9.66e-66,59;CL:0000040,9.66e-66,59;CL:0000559,9.66e-66,59;CL:0002009,2.20e-63,61;CL:0000839,4.18e-58,66;CL:0000557,3.84e-57,67;CL:0000763,3.99e-46,108;CL:0000049,3.99e-46,108;CL:0000738,1.76e-39,136;CL:0002087,6.85e-35,115;CL:0000037,2.00e-30,168;CL:0002031,6.92e-29,120;CL:0000988,1.83e-28,177;CL:0002032,2.22e-28,161;CL:0000837,2.22e-28,161;CL:0002393,1.85e-17,9;CL:0002397,1.85e-17,9;CL:0000094,6.75e-14,8;CL:0000771,4.15e-10,2;CL:0000134,4.39e-10,354;CL:0000081,5.05e-10,11;CL:0002320,9.98e-10,361;CL:0000219,1.80e-08,386;CL:0000775,4.09e-07,3;CL:0000048,6.10e-07,427;CL:0000723,9.90e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-63;42!CL:0000049;6.40e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-71!102;UBERON:0003061!1.61e-71!102;UBERON:0002193!3.20e-66!112;UBERON:0002371!8.78e-54!80;UBERON:0001474!3.69e-49!86;UBERON:0004765!5.41e-40!101;UBERON:0001434!5.41e-40!101;UBERON:0002405!8.15e-39!115;UBERON:0003081!1.14e-25!216;UBERON:0002204!2.47e-20!167;UBERON:0000178!3.10e-19!15;UBERON:0000179!3.10e-19!15;UBERON:0000463!3.10e-19!15;UBERON:0002384!1.02e-10!375;UBERON:0000926!4.14e-08!448;UBERON:0004120!4.14e-08!448;UBERON:0006603!4.14e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.01e-27;15!UBERON:0000179;1.01e-27;15!UBERON:0000463;1.01e-27;15!UBERON:0002390;1.25e-11;32!UBERON:0002193;8.14e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-68,98;UBERON:0003061,1.60e-68,98;UBERON:0002193,1.86e-61,108;UBERON:0002371,1.33e-49,76;UBERON:0001474,1.75e-45,82;UBERON:0004765,7.74e-41,90;UBERON:0002405,2.67e-39,93;UBERON:0001434,4.59e-36,100;UBERON:0003081,7.73e-29,203;UBERON:0000178,1.28e-27,15;UBERON:0000179,1.28e-27,15;UBERON:0000463,1.28e-27,15;UBERON:0002204,9.39e-19,167;UBERON:0000926,1.60e-15,315;UBERON:0004120,1.60e-15,315;UBERON:0006603,1.60e-15,315;UBERON:0002384,3.06e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.54816123316076,0,0,0,0,0,0,8.30993112797816,9.42558903109666,2.60413044859022,0,0,0.515151135268373,3.19876125315042,0.755751887377619,1.21292030593908,2.09186133215116,2.87817521615278,1.85823822537062,1.7261543539329,0.512321413058201,0.709446689665756,2.41321976515633,2.5819387343353,5.41705946377367,3.01187743268168,1.09162460023138,0.449446968890169,1.83650335422542,0.320929027076094,4.47535988059329,1.31940520074686,0.199463657621632,0.852449501065388,2.03146467040009,1.13477044938228,1.86846674698672,1.00499466102697,2.08593167368081,1.52032191293582,1.81619850790011,1.10483290796269,1.26584954976354,0.845021145247767,2.55125159958052,0.628975936525128,1.79725809834392,4.8056605709282,0.32145117339416,2.28010194992999,1.9891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,4.49404214368309,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,3.82318603571188,3.41788312304498,2.38231775457789,2.05681136543097,6.48473311192717,3.24018862342869,3.17250070517708,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0.687010689511529,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:2801321..2801334,+ | |||
}} |
Revision as of 23:54, 21 January 2014
Short description: | p@chr4:2801321..2801334, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:2801321..2801334, + |
Coexpression cluster: | C1047_Whole_blood_CD14_Neutrophils_Eosinophils_Reticulocytes_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.60e-68 | 98 |
blood island | 1.60e-68 | 98 |
hemolymphoid system | 1.86e-61 | 108 |
bone marrow | 1.33e-49 | 76 |
bone element | 1.75e-45 | 82 |
skeletal element | 7.74e-41 | 90 |
immune system | 2.67e-39 | 93 |
skeletal system | 4.59e-36 | 100 |
lateral plate mesoderm | 7.73e-29 | 203 |
blood | 1.28e-27 | 15 |
haemolymphatic fluid | 1.28e-27 | 15 |
organism substance | 1.28e-27 | 15 |
musculoskeletal system | 9.39e-19 | 167 |
mesoderm | 1.60e-15 | 315 |
mesoderm-derived structure | 1.60e-15 | 315 |
presumptive mesoderm | 1.60e-15 | 315 |
connective tissue | 3.06e-09 | 371 |