FFCP PHASE1:Mm9::chr15:36723350..36723392,-: Difference between revisions
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{{FFCP|EntrezGene=22631|HGNC=|MCL_coexpression_id=663|UniProt=|association_with_transcript=-76bp_to_ENSMUST00000154879_5end|description=CAGE_peak_1_at_Ywhaz_5end|id=chr15:36723350..36723392,-|ontology_enrichment_celltype=CL:0000117!1.62e-10!23;CL:0000337!1.62e-10!23;CL:0000540!4.65e-08!33;CL:0000047!4.65e-08!33;CL:0000031!4.65e-08!33;CL:0000404!4.65e-08!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-10,23;CL:0000337,1.62e-10,23;CL:0000540,4.65e-08,33;CL:0000047,4.65e-08,33;CL:0000031,4.65e-08,33;CL:0000404,4.65e-08,33;CL:0000393,1.31e-07,39;CL:0000211,1.31e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!8.08e-18!75;UBERON:0001016!8.08e-18!75;UBERON:0001049!9.61e-18!52;UBERON:0005068!9.61e-18!52;UBERON:0006241!9.61e-18!52;UBERON:0007135!9.61e-18!52;UBERON:0001017!5.69e-17!73;UBERON:0005743!5.69e-17!73;UBERON:0004121!8.74e-17!102;UBERON:0000924!8.74e-17!102;UBERON:0006601!8.74e-17!102;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0002616!3.83e-16!49;UBERON:0002020!1.25e-15!34;UBERON:0003080!4.17e-15!40;UBERON:0000033!4.97e-15!63;UBERON:0002780!1.63e-14!39;UBERON:0001890!1.63e-14!39;UBERON:0006240!1.63e-14!39;UBERON:0002346!2.01e-14!71;UBERON:0003075!2.01e-14!71;UBERON:0007284!2.01e-14!71;UBERON:0000153!5.52e-14!94;UBERON:0003056!2.31e-13!49;UBERON:0002791!5.39e-13!29;UBERON:0003528!5.39e-13!29;UBERON:0001893!5.39e-13!29;UBERON:0007811!4.72e-12!86;UBERON:0000956!4.97e-09!21;UBERON:0001869!4.97e-09!21;UBERON:0000203!4.97e-09!21;UBERON:0002619!4.90e-08!17;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.51e-19,54;UBERON:0001016,8.08e-18,75;UBERON:0001049,9.61e-18,52;UBERON:0005068,9.61e-18,52;UBERON:0006241,9.61e-18,52;UBERON:0007135,9.61e-18,52;UBERON:0004121,1.68e-17,95;UBERON:0000924,1.68e-17,95;UBERON:0006601,1.68e-17,95;UBERON:0001017,5.69e-17,73;UBERON:0010371,2.72e-16,73;UBERON:0002020,1.25e-15,34;UBERON:0002346,1.69e-15,64;UBERON:0003075,1.69e-15,64;UBERON:0007284,1.69e-15,64;UBERON:0003080,4.17e-15,40;UBERON:0000955,4.30e-15,47;UBERON:0006238,4.30e-15,47;UBERON:0002616,1.45e-14,46;UBERON:0002780,1.63e-14,39;UBERON:0001890,1.63e-14,39;UBERON:0006240,1.63e-14,39;UBERON:0003056,2.31e-13,49;UBERON:0003528,5.39e-13,29;UBERON:0002791,5.39e-13,29;UBERON:0001893,5.39e-13,29;UBERON:0000956,4.97e-09,21;UBERON:0001869,4.97e-09,21;UBERON:0000203,4.97e-09,21;UBERON:0002619,4.90e-08,17;UBERON:0002021,4.92e-08,10;UBERON:0000411,4.92e-08,10;UBERON:0001950,4.92e-08,10;UBERON:0010314,1.89e-07,92|phase1_expression=154.223339761917,112.370081259874,101.009831144477,68.0544475440368,62.1110705133471,97.8736155246317,103.023174502627,132.867899821382,134.594018376993,124.522328003301,110.606807473676,107.532870325713,130.112554747716,139.260701053463,46.6353666541928,43.3297072214228,21.6864182219725,122.714782324354,115.587467529638,88.2730475739903,135.984220951561,80.6242523751189,77.3151375851249,116.4744837936,106.675315696234,120.588712464154,100.798307101224,102.564306758483,97.1019673422071,84.6821235993367,111.086985838308,32.3865643464412,18.4519436275371,15.8481681015439,55.1706593724934,64.6652770444535,63.7008391538592,345.288595357949,258.621999037378,275.373489330218,318.233235024779,333.326196659722,337.429695356652,178.647584707344,164.534759369272,153.445084807166,59.461742170451,92.4426663053093,103.252505885202,89.0488937760218,125.707806619576,109.251948917378,128.185911028111,144.347066260258,127.043456075851,101.874736670235,109.742307496544,90.2426161485524,190.379789668882,252.857688092032,183.811107016792,59.6366376441673,76.479352465558,62.0930804924165,60.3208481165854,63.943210345149,72.8028268559723,64.5486752940212,155.119660013483,142.701276816597,152.695921941103,214.80954027166,223.298094902081,184.838616015366,161.691309607765,159.024850083534,222.434079618765,248.224185237605,256.676517071183,220.645759372614,195.417606734747,200.030734293796,205.199504266015,237.485821433369,225.530213718572,278.129384687142,271.787538645488,227.780122798517,177.502197172983,189.684615868032,111.307963661444,55.0671281268087,32.638624017972,25.3660500069774,25.9910566979068,29.1217476613268,77.6657643328588,218.150812899914,128.334286273817,126.495567674702,166.617765595813,85.9787398675929,73.8935195149272,63.9960032837998,94.1736028398781,100.583866593614,87.4557289875575,68.0535923125597,199.900046175617,130.480640237981,130.113995074602,135.182672370591,125.22421501004,121.181003004309,113.355513678819,102.418271933686,184.407445929843,78.0836527367523,124.730087824932,93.9865398194447,70.4484443888655,57.7001551230914,106.24330389433,154.002699228074,140.119846858201,92.7309110407187,89.0226375078988,57.5906621753671,90.0927909948029,282.95451783571,417.698050373406,332.732724394865,431.43196271723,448.013481242739,272.617914462143,338.110792233207,141.76039447964,85.3431818385238,131.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22631 | |||
|HGNC= | |||
|MCL_coexpression_id=663 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-76bp_to_ENSMUST00000154879_5end | |||
|cluster_id=chr15:36723350..36723392,- | |||
|description=CAGE_peak_1_at_Ywhaz_5end | |||
|id=chr15:36723350..36723392,- | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-10!23;CL:0000337!1.62e-10!23;CL:0000540!4.65e-08!33;CL:0000047!4.65e-08!33;CL:0000031!4.65e-08!33;CL:0000404!4.65e-08!33;CL:0000393!1.31e-07!39;CL:0000211!1.31e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-10,23;CL:0000337,1.62e-10,23;CL:0000540,4.65e-08,33;CL:0000047,4.65e-08,33;CL:0000031,4.65e-08,33;CL:0000404,4.65e-08,33;CL:0000393,1.31e-07,39;CL:0000211,1.31e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.08e-18!75;UBERON:0001016!8.08e-18!75;UBERON:0001049!9.61e-18!52;UBERON:0005068!9.61e-18!52;UBERON:0006241!9.61e-18!52;UBERON:0007135!9.61e-18!52;UBERON:0001017!5.69e-17!73;UBERON:0005743!5.69e-17!73;UBERON:0004121!8.74e-17!102;UBERON:0000924!8.74e-17!102;UBERON:0006601!8.74e-17!102;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0002616!3.83e-16!49;UBERON:0002020!1.25e-15!34;UBERON:0003080!4.17e-15!40;UBERON:0000033!4.97e-15!63;UBERON:0002780!1.63e-14!39;UBERON:0001890!1.63e-14!39;UBERON:0006240!1.63e-14!39;UBERON:0002346!2.01e-14!71;UBERON:0003075!2.01e-14!71;UBERON:0007284!2.01e-14!71;UBERON:0000153!5.52e-14!94;UBERON:0003056!2.31e-13!49;UBERON:0002791!5.39e-13!29;UBERON:0003528!5.39e-13!29;UBERON:0001893!5.39e-13!29;UBERON:0007811!4.72e-12!86;UBERON:0000956!4.97e-09!21;UBERON:0001869!4.97e-09!21;UBERON:0000203!4.97e-09!21;UBERON:0002619!4.90e-08!17;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.51e-19,54;UBERON:0001016,8.08e-18,75;UBERON:0001049,9.61e-18,52;UBERON:0005068,9.61e-18,52;UBERON:0006241,9.61e-18,52;UBERON:0007135,9.61e-18,52;UBERON:0004121,1.68e-17,95;UBERON:0000924,1.68e-17,95;UBERON:0006601,1.68e-17,95;UBERON:0001017,5.69e-17,73;UBERON:0010371,2.72e-16,73;UBERON:0002020,1.25e-15,34;UBERON:0002346,1.69e-15,64;UBERON:0003075,1.69e-15,64;UBERON:0007284,1.69e-15,64;UBERON:0003080,4.17e-15,40;UBERON:0000955,4.30e-15,47;UBERON:0006238,4.30e-15,47;UBERON:0002616,1.45e-14,46;UBERON:0002780,1.63e-14,39;UBERON:0001890,1.63e-14,39;UBERON:0006240,1.63e-14,39;UBERON:0003056,2.31e-13,49;UBERON:0003528,5.39e-13,29;UBERON:0002791,5.39e-13,29;UBERON:0001893,5.39e-13,29;UBERON:0000956,4.97e-09,21;UBERON:0001869,4.97e-09,21;UBERON:0000203,4.97e-09,21;UBERON:0002619,4.90e-08,17;UBERON:0002021,4.92e-08,10;UBERON:0000411,4.92e-08,10;UBERON:0001950,4.92e-08,10;UBERON:0010314,1.89e-07,92 | |||
|phase1_expression=154.223339761917,112.370081259874,101.009831144477,68.0544475440368,62.1110705133471,97.8736155246317,103.023174502627,132.867899821382,134.594018376993,124.522328003301,110.606807473676,107.532870325713,130.112554747716,139.260701053463,46.6353666541928,43.3297072214228,21.6864182219725,122.714782324354,115.587467529638,88.2730475739903,135.984220951561,80.6242523751189,77.3151375851249,116.4744837936,106.675315696234,120.588712464154,100.798307101224,102.564306758483,97.1019673422071,84.6821235993367,111.086985838308,32.3865643464412,18.4519436275371,15.8481681015439,55.1706593724934,64.6652770444535,63.7008391538592,345.288595357949,258.621999037378,275.373489330218,318.233235024779,333.326196659722,337.429695356652,178.647584707344,164.534759369272,153.445084807166,59.461742170451,92.4426663053093,103.252505885202,89.0488937760218,125.707806619576,109.251948917378,128.185911028111,144.347066260258,127.043456075851,101.874736670235,109.742307496544,90.2426161485524,190.379789668882,252.857688092032,183.811107016792,59.6366376441673,76.479352465558,62.0930804924165,60.3208481165854,63.943210345149,72.8028268559723,64.5486752940212,155.119660013483,142.701276816597,152.695921941103,214.80954027166,223.298094902081,184.838616015366,161.691309607765,159.024850083534,222.434079618765,248.224185237605,256.676517071183,220.645759372614,195.417606734747,200.030734293796,205.199504266015,237.485821433369,225.530213718572,278.129384687142,271.787538645488,227.780122798517,177.502197172983,189.684615868032,111.307963661444,55.0671281268087,32.638624017972,25.3660500069774,25.9910566979068,29.1217476613268,77.6657643328588,218.150812899914,128.334286273817,126.495567674702,166.617765595813,85.9787398675929,73.8935195149272,63.9960032837998,94.1736028398781,100.583866593614,87.4557289875575,68.0535923125597,199.900046175617,130.480640237981,130.113995074602,135.182672370591,125.22421501004,121.181003004309,113.355513678819,102.418271933686,184.407445929843,78.0836527367523,124.730087824932,93.9865398194447,70.4484443888655,57.7001551230914,106.24330389433,154.002699228074,140.119846858201,92.7309110407187,89.0226375078988,57.5906621753671,90.0927909948029,282.95451783571,417.698050373406,332.732724394865,431.43196271723,448.013481242739,272.617914462143,338.110792233207,141.76039447964,85.3431818385238,131.415834385511,75.5486262632442,127.387913660487,162.310885730032,162.055916824814,126.139932528494,115.321866061501,140.54075115248,126.028819532835,97.2724673978699,171.807690367475,157.336258699626,156.068647133423,142.258030345496,145.418711344988,142.086883941044,145.0764061676,138.527849705671,87.7766484141544,77.719067948644,101.162205784831,120.132948070591,129.927437229527,95.6129546357989,114.584452023242,84.0183269561414,82.2243711689726,74.1783283753801,80.2137470184861,58.1491404988504,66.3176195151326,76.8303731890166,58.2074052539244,62.4273946306169,69.5973865472631,48.1801043349735,342.141746313835,255.615057150143,83.9263708778847,85.1530824656613,138.424074597367,144.683446569053,158.378109964853,140.976783711716,111.189021922435,142.478993958307,96.3293994935359,121.877226495768,104.052776443312,114.996840839785,121.85255444945,88.0843020481137,90.9941189972463,76.8685314761857,188.34022564641,123.731139156336,127.359741310581,118.525072805973,118.698922146587,116.215053558258,102.316717067048,84.2853944963528,89.4892748695836,79.7145678934831,34.0920521150221,80.0856507437251,77.6408030697152,62.7365293553742,69.9867418790335,70.6649078074581,83.2626535325243,64.4439347889816,47.5056214450854,57.6578967694971,83.3855597858656,72.9396257430267,56.1667811606209,57.3354052939944,52.9222369889641,45.3496910081565,145.585513851284,154.246009181175,181.054088827091,135.796068620151,144.803883194006,147.57301280624,136.399006227686,126.641737459711,152.748454638899,137.972501651187,139.204013037986,130.599061828443,143.846589894291,132.643186719246,69.3639906120652,85.3931923595374,67.371705403608,91.0591262805617,240.986435571676,208.402378760937,182.131724313486,49.2318308048527,113.267450770436,124.549959430628,124.299300491825,112.554303835652,122.539270745317,129.082898039708,104.845971733798,112.810761153766,142.698887838695,244.204200480573,152.017831258056,160.437108904197,132.589984913811,124.552442844264,47.7882498023866,126.974272709055,110.650421849099,91.8506738411224,101.583851150986,84.2372305366361,94.8431835927372,89.0657637219889,108.018705650571,73.9526013569809,79.0639564312491,44.3482835967203,83.7481430154319,150.531074610175,160.663485258181,169.54059470999,180.17767738055,155.180871313801,168.498197096572,116.610075510892,163.096837104279,170.312984974511,92.1808703869741,151.035807694396,137.24476269152,160.553006158751,200.306793237263,220.441228357617,94.4397910680716,234.748432345305,76.3792837166402,121.768252098301,100.005044779644,66.1173284086465,63.0160389793926,79.8435824490764,134.792894985127,136.172763110919,149.670571630191,130.789874668071,175.72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| |||
|short_description=p1@Ywhaz | |||
}} |
Revision as of 05:24, 5 August 2015
Short description: | p1@Ywhaz |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ywhaz_5end |
Coexpression cluster: | MCL_coexpression_mm9:663 |
Association with transcript: | -76bp_to_ENSMUST00000154879_5end |
EntrezGene: | 22631 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-10 | 23 |
neuron | 4.65e-08 | 33 |
neuronal stem cell | 4.65e-08 | 33 |
neuroblast | 4.65e-08 | 33 |
electrically signaling cell | 4.65e-08 | 33 |
electrically responsive cell | 1.31e-07 | 39 |
electrically active cell | 1.31e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.51e-19 | 54 |
nervous system | 8.08e-18 | 75 |
neural tube | 9.61e-18 | 52 |
neural rod | 9.61e-18 | 52 |
future spinal cord | 9.61e-18 | 52 |
neural keel | 9.61e-18 | 52 |
ectoderm-derived structure | 1.68e-17 | 95 |
ectoderm | 1.68e-17 | 95 |
presumptive ectoderm | 1.68e-17 | 95 |
central nervous system | 5.69e-17 | 73 |
ecto-epithelium | 2.72e-16 | 73 |
gray matter | 1.25e-15 | 34 |
neurectoderm | 1.69e-15 | 64 |
neural plate | 1.69e-15 | 64 |
presumptive neural plate | 1.69e-15 | 64 |
anterior neural tube | 4.17e-15 | 40 |
brain | 4.30e-15 | 47 |
future brain | 4.30e-15 | 47 |
regional part of brain | 1.45e-14 | 46 |
regional part of forebrain | 1.63e-14 | 39 |
forebrain | 1.63e-14 | 39 |
future forebrain | 1.63e-14 | 39 |
pre-chordal neural plate | 2.31e-13 | 49 |
brain grey matter | 5.39e-13 | 29 |
regional part of telencephalon | 5.39e-13 | 29 |
telencephalon | 5.39e-13 | 29 |
cerebral cortex | 4.97e-09 | 21 |
cerebral hemisphere | 4.97e-09 | 21 |
pallium | 4.97e-09 | 21 |
regional part of cerebral cortex | 4.90e-08 | 17 |
occipital lobe | 4.92e-08 | 10 |
visual cortex | 4.92e-08 | 10 |
neocortex | 4.92e-08 | 10 |
structure with developmental contribution from neural crest | 1.89e-07 | 92 |