FFCP PHASE1:Hg19::chr4:19711103..19711108,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:19711103..19711108,+ | |||
|id=chr4:19711103..19711108,+ | |||
|ontology_enrichment_celltype=CL:0002149!3.26e-07!6;CL:0002255!3.26e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.34e-37;6!CL:0002255;1.34e-37;6!CL:0002253;7.30e-14;2!CL:0000499;1.20e-08;28!CL:0002563;1.40e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,9.19e-38,6;CL:0002255,9.19e-38,6;CL:0002253,7.30e-14,2;CL:0002076,6.13e-10,42;CL:0000499,1.11e-08,28;CL:0002563,1.40e-07,4;CL:0000223,2.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0005795;6.42e-23;10 | |||
|ontology_enrichment_disease=DOID:305!1.26e-11!106;DOID:299!3.31e-11!25;DOID:0050687!1.76e-10!143;DOID:14566!4.27e-09!239;DOID:162!2.37e-08!235;DOID:3001!3.26e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.34e-37;6!DOID:299;2.48e-16;25!DOID:154;1.21e-13;2!DOID:4236;1.21e-13;2!DOID:120;6.06e-09;27!DOID:193;2.27e-08;29!DOID:5409;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.19e-38,6;DOID:299,2.20e-16,25;DOID:154,1.37e-13,2;DOID:4236,1.37e-13,2;DOID:305,1.83e-11,106;DOID:0050687,4.45e-11,143;DOID:120,5.58e-09,27;DOID:193,2.10e-08,29;DOID:5409,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000995!3.26e-07!21;UBERON:0005795!8.35e-07!22;UBERON:0003975!8.35e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;8.35e-14;17!UBERON:0003975;4.45e-13;18!UBERON:0004175;2.61e-11;21!UBERON:0001052;1.40e-07;4!UBERON:0001242;1.40e-07;4!UBERON:0001262;1.40e-07;4!UBERON:0004786;1.40e-07;4!UBERON:0004808;1.40e-07;4!UBERON:0001277;1.40e-07;4!UBERON:0003134;2.49e-07;33!UBERON:0000474;4.28e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,2.34e-11,21;UBERON:0005795,7.16e-11,22;UBERON:0003975,7.16e-11,22;UBERON:0004175,1.20e-09,25;UBERON:0001052,1.40e-07,4;UBERON:0001242,1.40e-07,4;UBERON:0001262,1.40e-07,4;UBERON:0004786,1.40e-07,4;UBERON:0004808,1.40e-07,4;UBERON:0001277,1.40e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.429680979473094,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21537496453305,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.797594390929008,0,0.359030577639089,2.28159481036217,0.638002319463839,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.421996129056054,0.163232808159148,0,2.380275037163,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,2.95051555169723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961905843018405,0,0.39961921916426,0,0,0.343189995723929,0,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0.499921631848426,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0.300841313397029,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,1.3746412112643,0,1.91107787795487,0.111855431797792,0.294450700845729,0,0.647428837187895,0,0,0,0.233939463462106,0,1.18920090777569,0,0.329821550236287,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0.315543124386369,0,0,0,0,0.462175628631418,0,0,0,1.52038201213724,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0.404234377916439,0,0.342233301085281,0,0,0,0,0.747091421144008,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr4:19711103..19711108,+ | |||
}} |
Revision as of 00:24, 22 January 2014
Short description: | p@chr4:19711103..19711108, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:19711103..19711108, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 9.19e-38 | 6 |
stromal cell of endometrium | 9.19e-38 | 6 |
epithelial cell of large intestine | 7.30e-14 | 2 |
endo-epithelial cell | 6.13e-10 | 42 |
stromal cell | 1.11e-08 | 28 |
intestinal epithelial cell | 1.40e-07 | 4 |
endodermal cell | 2.67e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
uterus | 2.34e-11 | 21 |
embryonic uterus | 7.16e-11 | 22 |
internal female genitalia | 7.16e-11 | 22 |
internal genitalia | 1.20e-09 | 25 |
rectum | 1.40e-07 | 4 |
intestinal mucosa | 1.40e-07 | 4 |
wall of intestine | 1.40e-07 | 4 |
gastrointestinal system mucosa | 1.40e-07 | 4 |
gastrointestinal system epithelium | 1.40e-07 | 4 |
intestinal epithelium | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.19e-38 | 6 |
adenocarcinoma | 2.20e-16 | 25 |
mixed cell type cancer | 1.37e-13 | 2 |
carcinosarcoma | 1.37e-13 | 2 |
carcinoma | 1.83e-11 | 106 |
cell type cancer | 4.45e-11 | 143 |
female reproductive organ cancer | 5.58e-09 | 27 |
reproductive organ cancer | 2.10e-08 | 29 |
lung small cell carcinoma | 2.04e-07 | 4 |