FFCP PHASE1:Hg19::chr4:15480828..15480868,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29253 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000389652,uc003gnx.2_5end | |||
|description=CAGE_peak_1_at_CC2D2A_5end | |||
|id=chr4:15480828..15480868,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-37!180;CL:0002321!1.71e-14!248;CL:0000220!3.93e-14!246;CL:0000393!1.84e-13!60;CL:0000211!1.84e-13!60;CL:0000680!2.31e-13!57;CL:0000056!2.31e-13!57;CL:0000355!2.31e-13!57;CL:0000183!3.33e-13!59;CL:0000187!7.44e-13!54;CL:0000057!3.85e-12!75;CL:0000221!4.67e-10!71;CL:0000192!1.16e-09!42;CL:0000514!1.16e-09!42;CL:0000133!4.32e-09!59;CL:0000333!6.20e-08!41 | |||
|ontology_enrichment_celltype_v019=CL:0000187;4.78e-08;55!CL:0000393;6.32e-08;61!CL:0000211;6.32e-08;61!CL:0000192;2.05e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.06e-14,250;CL:0000393,4.27e-14,61;CL:0000211,4.27e-14,61;CL:0000680,5.30e-14,58;CL:0000056,5.30e-14,58;CL:0000355,5.30e-14,58;CL:0000187,1.72e-13,55;CL:0000057,4.74e-12,76;CL:0000221,2.46e-10,72;CL:0000192,2.94e-10,43;CL:0000514,2.94e-10,43;CL:0000133,4.66e-09,59;CL:0000333,5.27e-08,41 | |||
|ontology_enrichment_development_v019=CL:0000355;5.77e-08;58!CL:0000514;2.05e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.99e-24!365;UBERON:0000481!5.10e-22!347;UBERON:0000468!1.17e-16!659;UBERON:0000914!3.96e-16!83;UBERON:0002329!3.96e-16!83;UBERON:0003077!3.96e-16!83;UBERON:0003059!3.96e-16!83;UBERON:0007282!3.96e-16!83;UBERON:0009618!3.96e-16!83;UBERON:0007285!3.96e-16!83;UBERON:0000119!5.20e-15!312;UBERON:0000483!1.58e-14!309;UBERON:0000922!4.70e-14!612;UBERON:0002050!5.17e-13!605;UBERON:0005423!5.17e-13!605;UBERON:0004290!6.02e-13!70;UBERON:0000923!7.65e-13!604;UBERON:0005291!7.65e-13!604;UBERON:0006598!7.65e-13!604;UBERON:0002532!7.65e-13!604;UBERON:0002100!8.39e-13!216;UBERON:0003104!1.12e-12!238;UBERON:0009142!1.12e-12!238;UBERON:0001134!3.09e-12!61;UBERON:0002036!3.09e-12!61;UBERON:0003082!3.09e-12!61;UBERON:0003102!3.69e-12!95;UBERON:0002385!1.08e-11!63;UBERON:0001015!1.08e-11!63;UBERON:0000383!1.08e-11!63;UBERON:0000486!3.43e-11!82;UBERON:0005256!4.75e-11!143;UBERON:0000924!1.10e-10!173;UBERON:0006601!1.10e-10!173;UBERON:0000467!1.80e-10!625;UBERON:0000480!3.31e-10!626;UBERON:0000477!5.30e-10!286;UBERON:0004121!7.18e-10!169;UBERON:0000490!1.08e-08!138;UBERON:0000064!1.46e-08!219;UBERON:0001444!6.47e-08!48;UBERON:0000033!8.51e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001434;2.05e-07;36!UBERON:0002385;6.14e-07;31!UBERON:0001015;6.14e-07;31!UBERON:0000383;6.14e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.23e-15,309;UBERON:0000483,3.84e-15,306;UBERON:0007524,6.33e-14,73;UBERON:0003077,1.45e-13,72;UBERON:0007285,1.45e-13,72;UBERON:0002329,1.51e-13,71;UBERON:0003059,1.51e-13,71;UBERON:0007282,1.51e-13,71;UBERON:0004290,1.51e-13,71;UBERON:0009618,1.51e-13,71;UBERON:0001134,7.69e-13,62;UBERON:0002036,7.69e-13,62;UBERON:0003082,7.69e-13,62;UBERON:0007503,8.21e-13,78;UBERON:0003102,1.29e-12,99;UBERON:0002385,2.80e-12,64;UBERON:0001015,2.80e-12,64;UBERON:0000383,2.80e-12,64;UBERON:0004121,6.45e-12,171;UBERON:0000924,6.45e-12,171;UBERON:0006601,6.45e-12,171;UBERON:0000486,8.32e-12,83;UBERON:0003104,2.80e-11,160;UBERON:0009142,2.80e-11,160;UBERON:0000922,1.11e-10,592;UBERON:0002100,8.03e-10,199;UBERON:0000490,1.21e-09,148;UBERON:0011216,2.98e-09,223;UBERON:0002050,4.33e-09,564;UBERON:0005423,4.73e-09,581;UBERON:0005256,5.21e-09,122;UBERON:0000923,9.78e-09,560;UBERON:0010316,9.78e-09,560;UBERON:0005291,9.78e-09,560;UBERON:0006598,9.78e-09,560;UBERON:0010317,9.78e-09,560;UBERON:0002532,9.78e-09,560;UBERON:0000033,6.99e-08,56;UBERON:0001444,9.53e-08,49 | |||
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| |||
|short_description=p1@CC2D2A | |||
}} |
Revision as of 00:17, 22 January 2014
Short description: | p1@CC2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CC2D2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389652, uc003gnx.2_5end |
EntrezGene: | CC2D2A |
HGNC: | 29253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.06e-14 | 250 |
electrically responsive cell | 4.27e-14 | 61 |
electrically active cell | 4.27e-14 | 61 |
muscle precursor cell | 5.30e-14 | 58 |
myoblast | 5.30e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.30e-14 | 58 |
muscle cell | 1.72e-13 | 55 |
fibroblast | 4.74e-12 | 76 |
ectodermal cell | 2.46e-10 | 72 |
smooth muscle cell | 2.94e-10 | 43 |
smooth muscle myoblast | 2.94e-10 | 43 |
neurectodermal cell | 4.66e-09 | 59 |
migratory neural crest cell | 5.27e-08 | 41 |