FFCP PHASE1:Mm9::chr14:66594462..66594473,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=290|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:66594462..66594473,+|id=chr14:66594462..66594473,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.24e-15,5;CL:0000068,5.81e-10,3;CL:0002202,5.81e-10,3;CL:0000069,5.81e-10,3;CL:0002632,5.81e-10,3;CL:0002368,5.81e-10,3;CL:0000307,5.81e-10,3;CL:0000377,5.81e-10,3;CL:0000223,1.69e-08,20;CL:0000066,3.45e-08,25;CL:0002321,5.74e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!1.01e-10!79;UBERON:0000062!2.02e-09!269;UBERON:0003886!4.77e-07!38;UBERON:0002365!7.60e-07!25;UBERON:0002330!7.60e-07!25;UBERON:0004111!7.95e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.81e-10,3;UBERON:0001005,5.81e-10,3;UBERON:0007196,5.81e-10,3;UBERON:0001558,5.81e-10,3;UBERON:0002107,2.99e-09,22;UBERON:0007499,2.99e-09,22;UBERON:0006925,2.99e-09,22;UBERON:0009497,2.99e-09,22;UBERON:0000015,2.99e-09,22;UBERON:0002423,2.99e-09,22;UBERON:0006235,2.99e-09,22;UBERON:0008835,2.99e-09,22;UBERON:0003894,2.99e-09,22;UBERON:0004161,2.99e-09,22;UBERON:0008836,2.99e-09,22;UBERON:0009854,8.92e-09,23;UBERON:0009856,8.92e-09,23;UBERON:0002365,6.08e-08,25;UBERON:0002330,6.08e-08,25|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.91763712426868,0,0.430761996159075,0.430942465371778,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,1.74986909166855,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,2.66788438833342,0,0,0,0.898800331555214,2.68952813725088,0,0,0,0.285650984403804,0.441737081903227,0,0,0.919218786610021,0,1.14918604276669,0.768032666281217,0,0.0914876436024097,0,0.279182999001381,2.25105044012672,2.29197371665215,0.294628585473668,0.284743361598206,0,0,0,2.31891590961342,0.860423876981386,14.2793980078628,4.85732872474035,6.49776417447669,4.48026887097336,0.280888840263504,0,0,0,2.11265129665021,0,0,0,9.74209684550464,10.6411143499541,14.1546844604139,1.48439043634778,0.776813650941515,0,0,0,0,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,1.37250180845588,0.125654352112864,0.521472960576829,0,0.62336413367868,0.162241263067758,0,1.7416975885413,11.3725241295154,0.210441855886474,0,0.229902104433473,0,0,0,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.656669856316381,0.0810688095458557,0.292399974850665,0.439100230582101,0,0.630869845692382,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,2.96452627087149,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.823684239564244,15.814502718009,0.372140947668503,0.624075346229121,1.01031551178845,0.717589654087649,2.41221760681684,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0.983528546038072,0.827810238914197,0.481651769963376,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.712994756769443,0,1.05418608574999,2.06271086496374,0.680879211507576,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0.322928853391811,0,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,0,0,1.12738587736838,0.299033092087958,0.165458490457098,0.388902376688095,0.774958940866387,0.168956125490778,1.05621514781179,0.39061315453185,1.78260885523708,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,1.6942555278512,0,0,0.171853182343688,3.42541259885321,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.25384382367503,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p@chr14:66594462..66594473,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=290 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:66594462..66594473,+ | |||
|description=CAGE_peak_at_chr14:66594462..66594473,+ | |||
|id=chr14:66594462..66594473,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.24e-15,5;CL:0000068,5.81e-10,3;CL:0002202,5.81e-10,3;CL:0000069,5.81e-10,3;CL:0002632,5.81e-10,3;CL:0002368,5.81e-10,3;CL:0000307,5.81e-10,3;CL:0000377,5.81e-10,3;CL:0000223,1.69e-08,20;CL:0000066,3.45e-08,25;CL:0002321,5.74e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!1.01e-10!79;UBERON:0000062!2.02e-09!269;UBERON:0003886!4.77e-07!38;UBERON:0002365!7.60e-07!25;UBERON:0002330!7.60e-07!25;UBERON:0004111!7.95e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.81e-10,3;UBERON:0001005,5.81e-10,3;UBERON:0007196,5.81e-10,3;UBERON:0001558,5.81e-10,3;UBERON:0002107,2.99e-09,22;UBERON:0007499,2.99e-09,22;UBERON:0006925,2.99e-09,22;UBERON:0009497,2.99e-09,22;UBERON:0000015,2.99e-09,22;UBERON:0002423,2.99e-09,22;UBERON:0006235,2.99e-09,22;UBERON:0008835,2.99e-09,22;UBERON:0003894,2.99e-09,22;UBERON:0004161,2.99e-09,22;UBERON:0008836,2.99e-09,22;UBERON:0009854,8.92e-09,23;UBERON:0009856,8.92e-09,23;UBERON:0002365,6.08e-08,25;UBERON:0002330,6.08e-08,25 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0.91763712426868,0,0.430761996159075,0.430942465371778,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,1.09843091367236,1.74986909166855,0.279972843250725,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,2.66788438833342,0,0,0,0.898800331555214,2.68952813725088,0,0,0,0.285650984403804,0.441737081903227,0,0,0.919218786610021,0,1.14918604276669,0.768032666281217,0,0.0914876436024097,0,0.279182999001381,2.25105044012672,2.29197371665215,0.294628585473668,0.284743361598206,0,0,0,2.31891590961342,0.860423876981386,14.2793980078628,4.85732872474035,6.49776417447669,4.48026887097336,0.280888840263504,0,0,0,2.11265129665021,0,0,0,9.74209684550464,10.6411143499541,14.1546844604139,1.48439043634778,0.776813650941515,0,0,0,0,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,1.37250180845588,0.125654352112864,0.521472960576829,0,0.62336413367868,0.162241263067758,0,1.7416975885413,11.3725241295154,0.210441855886474,0,0.229902104433473,0,0,0,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0.308534225774757,0,0.268273401399619,0.116765342367169,0,0.656669856316381,0.0810688095458557,0.292399974850665,0.439100230582101,0,0.630869845692382,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,2.96452627087149,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0.823684239564244,15.814502718009,0.372140947668503,0.624075346229121,1.01031551178845,0.717589654087649,2.41221760681684,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0.983528546038072,0.827810238914197,0.481651769963376,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0.727067458955011,0.712994756769443,0,1.05418608574999,2.06271086496374,0.680879211507576,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0.322928853391811,0,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,0,0,1.12738587736838,0.299033092087958,0.165458490457098,0.388902376688095,0.774958940866387,0.168956125490778,1.05621514781179,0.39061315453185,1.78260885523708,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,1.6942555278512,0,0,0.171853182343688,3.42541259885321,0.755393897389701,2.02506750069542,0.900642406448441,0.453142408984205,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.25384382367503,0,0,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr14:66594462..66594473,+ | |||
}} |
Latest revision as of 16:20, 4 August 2015
Short description: | p@chr14:66594462..66594473, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66594462..66594473, + |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.24e-15 | 5 |
duct epithelial cell | 5.81e-10 | 3 |
epithelial cell of tracheobronchial tree | 5.81e-10 | 3 |
branched duct epithelial cell | 5.81e-10 | 3 |
epithelial cell of lower respiratory tract | 5.81e-10 | 3 |
respiratory epithelial cell | 5.81e-10 | 3 |
tracheal epithelial cell | 5.81e-10 | 3 |
tracheoblast | 5.81e-10 | 3 |
endodermal cell | 1.69e-08 | 20 |
epithelial cell | 3.45e-08 | 25 |
embryonic cell | 5.74e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
trachea | 5.81e-10 | 3 |
respiratory airway | 5.81e-10 | 3 |
tracheobronchial tree | 5.81e-10 | 3 |
lower respiratory tract | 5.81e-10 | 3 |
liver | 2.99e-09 | 22 |
epithelial sac | 2.99e-09 | 22 |
digestive gland | 2.99e-09 | 22 |
epithelium of foregut-midgut junction | 2.99e-09 | 22 |
anatomical boundary | 2.99e-09 | 22 |
hepatobiliary system | 2.99e-09 | 22 |
foregut-midgut junction | 2.99e-09 | 22 |
hepatic diverticulum | 2.99e-09 | 22 |
liver primordium | 2.99e-09 | 22 |
septum transversum | 2.99e-09 | 22 |
liver bud | 2.99e-09 | 22 |
digestive tract diverticulum | 8.92e-09 | 23 |
sac | 8.92e-09 | 23 |
exocrine gland | 6.08e-08 | 25 |
exocrine system | 6.08e-08 | 25 |