FFCP PHASE1:Mm9::chr14:66590001..66590019,+: Difference between revisions
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{{FFCP|EntrezGene=12759|HGNC=|MCL_coexpression_id=2932|UniProt=E9Q9B8|association_with_transcript=106bp_to_ENSMUST00000128539_5end|description=CAGE_peak_10_at_Clu_5end|id=chr14:66590001..66590019,+|ontology_enrichment_celltype=CL:0000117!5.95e-11!23;CL:0000337!5.95e-11!23;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!5.65e-09!43|ontology_enrichment_celltype_v019_2=CL:0002453,3.75e-12,8;CL:0000333,1.45e-09,10;CL:0000095,1.45e-09,10;CL:0000243,1.45e-09,10;CL:0000123,1.45e-09,10;CL:0000125,1.45e-09,10;CL:0000030,1.45e-09,10;CL:0000339,1.45e-09,10;CL:0000128,8.16e-08,6;CL:0000126,8.16e-08,6;CL:0000127,8.16e-08,6;CL:0002610,8.28e-08,3;CL:0002319,1.90e-07,43;CL:0000221,3.23e-07,44;CL:0000133,3.23e-07,44;CL:0002605,7.10e-07,2;CL:0002604,7.10e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!9.58e-26!63;UBERON:0003056!1.68e-22!49;UBERON:0002020!2.73e-20!34;UBERON:0000955!1.85e-19!50;UBERON:0006238!1.85e-19!50;UBERON:0002791!3.95e-19!29;UBERON:0003528!3.95e-19!29;UBERON:0001893!3.95e-19!29;UBERON:0001017!1.19e-18!73;UBERON:0005743!1.19e-18!73;UBERON:0004121!1.24e-18!102;UBERON:0000924!1.24e-18!102;UBERON:0006601!1.24e-18!102;UBERON:0002616!1.33e-18!49;UBERON:0002346!7.13e-18!71;UBERON:0003075!7.13e-18!71;UBERON:0007284!7.13e-18!71;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0001049!4.14e-17!52;UBERON:0005068!4.14e-17!52;UBERON:0006241!4.14e-17!52;UBERON:0007135!4.14e-17!52;UBERON:0003080!5.46e-16!40;UBERON:0007811!2.41e-15!86;UBERON:0002780!3.11e-15!39;UBERON:0001890!3.11e-15!39;UBERON:0006240!3.11e-15!39;UBERON:0000153!1.20e-13!94;UBERON:0000956!5.84e-13!21;UBERON:0001869!5.84e-13!21;UBERON:0000203!5.84e-13!21;UBERON:0002619!3.81e-11!17;UBERON:0005085!7.07e-08!13;UBERON:0000970!1.07e-07!9;UBERON:0000019!1.07e-07!9;UBERON:0000047!1.07e-07!9;UBERON:0004088!1.07e-07!9;UBERON:0002104!1.07e-07!9;UBERON:0001456!1.07e-07!9;UBERON:0003072!1.07e-07!9;UBERON:0003071!1.07e-07!9;UBERON:0004128!1.07e-07!9;UBERON:0002420!1.90e-07!8;UBERON:0007245!1.90e-07!8;UBERON:0010009!1.90e-07!8;UBERON:0010011!1.90e-07!8;UBERON:0000454!1.90e-07!8;UBERON:0000020!1.91e-07!12;UBERON:0001032!1.91e-07!12;UBERON:0004456!1.91e-07!12;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0000025!7.13e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.01e-18,95;UBERON:0000924,6.01e-18,95;UBERON:0006601,6.01e-18,95;UBERON:0001017,1.29e-16,73;UBERON:0003056,4.66e-16,49;UBERON:0001016,5.08e-16,75;UBERON:0000073,2.30e-14,54;UBERON:0002346,3.87e-14,64;UBERON:0003075,3.87e-14,64;UBERON:0007284,3.87e-14,64;UBERON:0000955,1.17e-13,47;UBERON:0006238,1.17e-13,47;UBERON:0003528,1.90e-12,29;UBERON:0002791,1.90e-12,29;UBERON:0001893,1.90e-12,29;UBERON:0002616,2.48e-12,46;UBERON:0010371,8.76e-12,73;UBERON:0010314,1.36e-11,92;UBERON:0003080,3.54e-11,40;UBERON:0001049,1.81e-10,52;UBERON:0005068,1.81e-10,52;UBERON:0006241,1.81e-10,52;UBERON:0007135,1.81e-10,52;UBERON:0002020,3.36e-10,34;UBERON:0002780,5.21e-10,39;UBERON:0001890,5.21e-10,39;UBERON:0006240,5.21e-10,39;UBERON:0002619,6.74e-09,17;UBERON:0000956,9.00e-09,21;UBERON:0001869,9.00e-09,21;UBERON:0000203,9.00e-09,21;UBERON:0004684,8.28e-08,3;UBERON:0002275,8.28e-08,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,4.61340983742391,8.36048566019419,2.65974201088189,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0,0,0,0,0,1.49800055259202,4.2264013585371,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.61245399607477,0.383381884072945,0,1.10115880999389,1.78762273319263,1.38245879930619,1.18697658957174,1.46380229763855,0.52091337055676,0.837548997004143,0.56276261003168,1.22238598221448,0.589257170947335,0.427115042397309,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,7.11066703153331,0,0,0,0.45673551887624,4.91981978929626,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,1.19832511523858,0.915001205637253,2.26177833803156,1.73824320192276,2.55715457330331,1.45451631191692,0.973447578406546,0,0.124406970610093,0,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.452114453507145,1.08858398642125,1.40925092313335,1.21812241927647,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.810688095458557,1.02339991197733,1.3173006917463,2.81833479396781,1.89260953707715,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0.683483523191411,0,0,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,1.89038500578056,2.74033007908257,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0.695305955669133,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p10@Clu}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12759 | |||
|HGNC= | |||
|MCL_coexpression_id=2932 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q9B8 | |||
|association_with_transcript=106bp_to_ENSMUST00000128539_5end | |||
|cluster_id=chr14:66590001..66590019,+ | |||
|description=CAGE_peak_10_at_Clu_5end | |||
|id=chr14:66590001..66590019,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.95e-11!23;CL:0000337!5.95e-11!23;CL:0000221!1.92e-09!44;CL:0000133!1.92e-09!44;CL:0002319!5.65e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.75e-12,8;CL:0000333,1.45e-09,10;CL:0000095,1.45e-09,10;CL:0000243,1.45e-09,10;CL:0000123,1.45e-09,10;CL:0000125,1.45e-09,10;CL:0000030,1.45e-09,10;CL:0000339,1.45e-09,10;CL:0000128,8.16e-08,6;CL:0000126,8.16e-08,6;CL:0000127,8.16e-08,6;CL:0002610,8.28e-08,3;CL:0002319,1.90e-07,43;CL:0000221,3.23e-07,44;CL:0000133,3.23e-07,44;CL:0002605,7.10e-07,2;CL:0002604,7.10e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!9.58e-26!63;UBERON:0003056!1.68e-22!49;UBERON:0002020!2.73e-20!34;UBERON:0000955!1.85e-19!50;UBERON:0006238!1.85e-19!50;UBERON:0002791!3.95e-19!29;UBERON:0003528!3.95e-19!29;UBERON:0001893!3.95e-19!29;UBERON:0001017!1.19e-18!73;UBERON:0005743!1.19e-18!73;UBERON:0004121!1.24e-18!102;UBERON:0000924!1.24e-18!102;UBERON:0006601!1.24e-18!102;UBERON:0002616!1.33e-18!49;UBERON:0002346!7.13e-18!71;UBERON:0003075!7.13e-18!71;UBERON:0007284!7.13e-18!71;UBERON:0000073!1.06e-17!75;UBERON:0001016!1.06e-17!75;UBERON:0001049!4.14e-17!52;UBERON:0005068!4.14e-17!52;UBERON:0006241!4.14e-17!52;UBERON:0007135!4.14e-17!52;UBERON:0003080!5.46e-16!40;UBERON:0007811!2.41e-15!86;UBERON:0002780!3.11e-15!39;UBERON:0001890!3.11e-15!39;UBERON:0006240!3.11e-15!39;UBERON:0000153!1.20e-13!94;UBERON:0000956!5.84e-13!21;UBERON:0001869!5.84e-13!21;UBERON:0000203!5.84e-13!21;UBERON:0002619!3.81e-11!17;UBERON:0005085!7.07e-08!13;UBERON:0000970!1.07e-07!9;UBERON:0000019!1.07e-07!9;UBERON:0000047!1.07e-07!9;UBERON:0004088!1.07e-07!9;UBERON:0002104!1.07e-07!9;UBERON:0001456!1.07e-07!9;UBERON:0003072!1.07e-07!9;UBERON:0003071!1.07e-07!9;UBERON:0004128!1.07e-07!9;UBERON:0002420!1.90e-07!8;UBERON:0007245!1.90e-07!8;UBERON:0010009!1.90e-07!8;UBERON:0010011!1.90e-07!8;UBERON:0000454!1.90e-07!8;UBERON:0000020!1.91e-07!12;UBERON:0001032!1.91e-07!12;UBERON:0004456!1.91e-07!12;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0000025!7.13e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.01e-18,95;UBERON:0000924,6.01e-18,95;UBERON:0006601,6.01e-18,95;UBERON:0001017,1.29e-16,73;UBERON:0003056,4.66e-16,49;UBERON:0001016,5.08e-16,75;UBERON:0000073,2.30e-14,54;UBERON:0002346,3.87e-14,64;UBERON:0003075,3.87e-14,64;UBERON:0007284,3.87e-14,64;UBERON:0000955,1.17e-13,47;UBERON:0006238,1.17e-13,47;UBERON:0003528,1.90e-12,29;UBERON:0002791,1.90e-12,29;UBERON:0001893,1.90e-12,29;UBERON:0002616,2.48e-12,46;UBERON:0010371,8.76e-12,73;UBERON:0010314,1.36e-11,92;UBERON:0003080,3.54e-11,40;UBERON:0001049,1.81e-10,52;UBERON:0005068,1.81e-10,52;UBERON:0006241,1.81e-10,52;UBERON:0007135,1.81e-10,52;UBERON:0002020,3.36e-10,34;UBERON:0002780,5.21e-10,39;UBERON:0001890,5.21e-10,39;UBERON:0006240,5.21e-10,39;UBERON:0002619,6.74e-09,17;UBERON:0000956,9.00e-09,21;UBERON:0001869,9.00e-09,21;UBERON:0000203,9.00e-09,21;UBERON:0004684,8.28e-08,3;UBERON:0002275,8.28e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,4.61340983742391,8.36048566019419,2.65974201088189,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0,0,0,0,0,1.49800055259202,4.2264013585371,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.61245399607477,0.383381884072945,0,1.10115880999389,1.78762273319263,1.38245879930619,1.18697658957174,1.46380229763855,0.52091337055676,0.837548997004143,0.56276261003168,1.22238598221448,0.589257170947335,0.427115042397309,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,7.11066703153331,0,0,0,0.45673551887624,4.91981978929626,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,1.19832511523858,0.915001205637253,2.26177833803156,1.73824320192276,2.55715457330331,1.45451631191692,0.973447578406546,0,0.124406970610093,0,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.452114453507145,1.08858398642125,1.40925092313335,1.21812241927647,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.810688095458557,1.02339991197733,1.3173006917463,2.81833479396781,1.89260953707715,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0.683483523191411,0,0,0.188368457004691,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.920650473014354,0.572895513439397,1.89038500578056,2.74033007908257,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0.695305955669133,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p10@Clu | |||
}} |
Revision as of 16:15, 4 August 2015
Short description: | p10@Clu |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Clu_5end |
Coexpression cluster: | MCL_coexpression_mm9:2932 |
Association with transcript: | 106bp_to_ENSMUST00000128539_5end |
EntrezGene: | 12759 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.75e-12 | 8 |
migratory neural crest cell | 1.45e-09 | 10 |
neuron associated cell | 1.45e-09 | 10 |
glial cell (sensu Vertebrata) | 1.45e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.45e-09 | 10 |
glial cell | 1.45e-09 | 10 |
glioblast | 1.45e-09 | 10 |
glioblast (sensu Vertebrata) | 1.45e-09 | 10 |
oligodendrocyte | 8.16e-08 | 6 |
macroglial cell | 8.16e-08 | 6 |
astrocyte | 8.16e-08 | 6 |
raphe nuclei neuron | 8.28e-08 | 3 |
neural cell | 1.90e-07 | 43 |
ectodermal cell | 3.23e-07 | 44 |
neurectodermal cell | 3.23e-07 | 44 |
astrocyte of the cerebral cortex | 7.10e-07 | 2 |
astrocyte of the hippocampus | 7.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.01e-18 | 95 |
ectoderm | 6.01e-18 | 95 |
presumptive ectoderm | 6.01e-18 | 95 |
central nervous system | 1.29e-16 | 73 |
pre-chordal neural plate | 4.66e-16 | 49 |
nervous system | 5.08e-16 | 75 |
regional part of nervous system | 2.30e-14 | 54 |
neurectoderm | 3.87e-14 | 64 |
neural plate | 3.87e-14 | 64 |
presumptive neural plate | 3.87e-14 | 64 |
brain | 1.17e-13 | 47 |
future brain | 1.17e-13 | 47 |
brain grey matter | 1.90e-12 | 29 |
regional part of telencephalon | 1.90e-12 | 29 |
telencephalon | 1.90e-12 | 29 |
regional part of brain | 2.48e-12 | 46 |
ecto-epithelium | 8.76e-12 | 73 |
structure with developmental contribution from neural crest | 1.36e-11 | 92 |
anterior neural tube | 3.54e-11 | 40 |
neural tube | 1.81e-10 | 52 |
neural rod | 1.81e-10 | 52 |
future spinal cord | 1.81e-10 | 52 |
neural keel | 1.81e-10 | 52 |
gray matter | 3.36e-10 | 34 |
regional part of forebrain | 5.21e-10 | 39 |
forebrain | 5.21e-10 | 39 |
future forebrain | 5.21e-10 | 39 |
regional part of cerebral cortex | 6.74e-09 | 17 |
cerebral cortex | 9.00e-09 | 21 |
cerebral hemisphere | 9.00e-09 | 21 |
pallium | 9.00e-09 | 21 |
raphe nuclei | 8.28e-08 | 3 |
reticular formation | 8.28e-08 | 3 |