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FFCP PHASE1:Mm9::chr14:62911312..62911333,+: Difference between revisions

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{{FFCP|EntrezGene=67153|HGNC=|UniProt=E9PYC5|association_with_transcript=-92bp_to_ENSMUST00000166879_5end|description=CAGE_peak_2_at_Rnaseh2b_5end|id=chr14:62911312..62911333,+|ontology_enrichment_celltype=CL:0000117!1.35e-07!23;CL:0000337!1.35e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.44e-08,23;CL:0000337,4.44e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.96e-14!52;UBERON:0005068!3.96e-14!52;UBERON:0006241!3.96e-14!52;UBERON:0007135!3.96e-14!52;UBERON:0000955!5.40e-13!50;UBERON:0006238!5.40e-13!50;UBERON:0002616!2.48e-12!49;UBERON:0007811!2.85e-12!86;UBERON:0000153!4.98e-12!94;UBERON:0001017!6.69e-12!73;UBERON:0005743!6.69e-12!73;UBERON:0000033!9.71e-12!63;UBERON:0000073!3.93e-11!75;UBERON:0001016!3.93e-11!75;UBERON:0002020!1.30e-10!34;UBERON:0002346!1.25e-09!71;UBERON:0003075!1.25e-09!71;UBERON:0007284!1.25e-09!71;UBERON:0003080!1.61e-09!40;UBERON:0002780!5.47e-09!39;UBERON:0001890!5.47e-09!39;UBERON:0006240!5.47e-09!39;UBERON:0003056!4.03e-08!49;UBERON:0002791!7.76e-08!29;UBERON:0003528!7.76e-08!29;UBERON:0001893!7.76e-08!29;UBERON:0000489!8.56e-08!21;UBERON:0004121!1.06e-07!102;UBERON:0000924!1.06e-07!102;UBERON:0006601!1.06e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.01e-15,10;UBERON:0000411,2.01e-15,10;UBERON:0001950,2.01e-15,10;UBERON:0000489,3.41e-15,21;UBERON:0002020,2.17e-13,34;UBERON:0001017,2.87e-12,73;UBERON:0001016,7.19e-12,75;UBERON:0001049,1.02e-11,52;UBERON:0005068,1.02e-11,52;UBERON:0006241,1.02e-11,52;UBERON:0007135,1.02e-11,52;UBERON:0002240,2.46e-11,6;UBERON:0005174,2.46e-11,6;UBERON:0001137,2.46e-11,6;UBERON:0000073,2.68e-11,54;UBERON:0002346,4.18e-09,64;UBERON:0003075,4.18e-09,64;UBERON:0007284,4.18e-09,64;UBERON:0002619,7.30e-09,17;UBERON:0004121,8.55e-09,95;UBERON:0000924,8.55e-09,95;UBERON:0006601,8.55e-09,95;UBERON:0003076,1.11e-08,12;UBERON:0003057,1.11e-08,12;UBERON:0003528,1.84e-08,29;UBERON:0002791,1.84e-08,29;UBERON:0001893,1.84e-08,29;UBERON:0001948,5.17e-08,5;UBERON:0002315,5.17e-08,5;UBERON:0010371,1.04e-07,73;UBERON:0002113,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0000955,1.42e-07,47;UBERON:0006238,1.42e-07,47;UBERON:0000956,4.51e-07,21;UBERON:0001869,4.51e-07,21;UBERON:0000203,4.51e-07,21;UBERON:0003103,9.46e-07,43|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,1.32521124570968,0.244981598429908,0.575072826109418,0,4.40463523997555,0.893811366596314,0.307213066512487,0.131886287730194,0.182975287204819,0,1.3959149950069,1.12552522006336,0.61119299110724,1.76777151284201,1.56608848879013,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0.127070227073065,0.599162557619291,0,0.251308704225729,0.521472960576829,0.511430914660661,0.62336413367868,0.486723789203273,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.710234206755631,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,2.25415471346161,0.407302655690628,0.581857461502877,0.841629838683823,1.64414996523069,2.06654207171443,2.19798218977925,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,2.24770825982909,0.937693492737625,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,1.28528526568723,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.643011105094777,0.177340233642274,0.535106452806212,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0.774958940866387,0.506868376472335,0.469428954583016,0.5208175393758,0.734015410979976,0.483168241652012,0,0,0,0.410843828659309,0.649604114888975,0.716106782669926,0.993406773906324,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0.403304740547362,0.584747284438515,0.192423683280659,0.701261413089414,0.226730383615211,0.443971906748129,0,0,0,0,0.549454872801795,0,0,2.82375921308533,2.30162618253588,5.15605962095457,2.23409137046794,1.37016503954128,0.755393897389701,0,0.45032120322422,1.35942722695261,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0,0.365855945745545,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p2@Rnaseh2b}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:67153
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9PYC5
|association_with_transcript=-92bp_to_ENSMUST00000166879_5end
|cluster_id=chr14:62911312..62911333,+
|description=CAGE_peak_2_at_Rnaseh2b_5end
|id=chr14:62911312..62911333,+
|ontology_enrichment_celltype=CL:0000117!1.35e-07!23;CL:0000337!1.35e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.44e-08,23;CL:0000337,4.44e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.96e-14!52;UBERON:0005068!3.96e-14!52;UBERON:0006241!3.96e-14!52;UBERON:0007135!3.96e-14!52;UBERON:0000955!5.40e-13!50;UBERON:0006238!5.40e-13!50;UBERON:0002616!2.48e-12!49;UBERON:0007811!2.85e-12!86;UBERON:0000153!4.98e-12!94;UBERON:0001017!6.69e-12!73;UBERON:0005743!6.69e-12!73;UBERON:0000033!9.71e-12!63;UBERON:0000073!3.93e-11!75;UBERON:0001016!3.93e-11!75;UBERON:0002020!1.30e-10!34;UBERON:0002346!1.25e-09!71;UBERON:0003075!1.25e-09!71;UBERON:0007284!1.25e-09!71;UBERON:0003080!1.61e-09!40;UBERON:0002780!5.47e-09!39;UBERON:0001890!5.47e-09!39;UBERON:0006240!5.47e-09!39;UBERON:0003056!4.03e-08!49;UBERON:0002791!7.76e-08!29;UBERON:0003528!7.76e-08!29;UBERON:0001893!7.76e-08!29;UBERON:0000489!8.56e-08!21;UBERON:0004121!1.06e-07!102;UBERON:0000924!1.06e-07!102;UBERON:0006601!1.06e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.01e-15,10;UBERON:0000411,2.01e-15,10;UBERON:0001950,2.01e-15,10;UBERON:0000489,3.41e-15,21;UBERON:0002020,2.17e-13,34;UBERON:0001017,2.87e-12,73;UBERON:0001016,7.19e-12,75;UBERON:0001049,1.02e-11,52;UBERON:0005068,1.02e-11,52;UBERON:0006241,1.02e-11,52;UBERON:0007135,1.02e-11,52;UBERON:0002240,2.46e-11,6;UBERON:0005174,2.46e-11,6;UBERON:0001137,2.46e-11,6;UBERON:0000073,2.68e-11,54;UBERON:0002346,4.18e-09,64;UBERON:0003075,4.18e-09,64;UBERON:0007284,4.18e-09,64;UBERON:0002619,7.30e-09,17;UBERON:0004121,8.55e-09,95;UBERON:0000924,8.55e-09,95;UBERON:0006601,8.55e-09,95;UBERON:0003076,1.11e-08,12;UBERON:0003057,1.11e-08,12;UBERON:0003528,1.84e-08,29;UBERON:0002791,1.84e-08,29;UBERON:0001893,1.84e-08,29;UBERON:0001948,5.17e-08,5;UBERON:0002315,5.17e-08,5;UBERON:0010371,1.04e-07,73;UBERON:0002113,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0000955,1.42e-07,47;UBERON:0006238,1.42e-07,47;UBERON:0000956,4.51e-07,21;UBERON:0001869,4.51e-07,21;UBERON:0000203,4.51e-07,21;UBERON:0003103,9.46e-07,43
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,1.32521124570968,0.244981598429908,0.575072826109418,0,4.40463523997555,0.893811366596314,0.307213066512487,0.131886287730194,0.182975287204819,0,1.3959149950069,1.12552522006336,0.61119299110724,1.76777151284201,1.56608848879013,0.372798891650601,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0.127070227073065,0.599162557619291,0,0.251308704225729,0.521472960576829,0.511430914660661,0.62336413367868,0.486723789203273,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.710234206755631,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,2.25415471346161,0.407302655690628,0.581857461502877,0.841629838683823,1.64414996523069,2.06654207171443,2.19798218977925,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,2.24770825982909,0.937693492737625,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,1.28528526568723,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.643011105094777,0.177340233642274,0.535106452806212,0,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0.194451188344048,0.774958940866387,0.506868376472335,0.469428954583016,0.5208175393758,0.734015410979976,0.483168241652012,0,0,0,0.410843828659309,0.649604114888975,0.716106782669926,0.993406773906324,0.360586348559907,0.295379054349154,0.201932899896295,0.0762068066549998,0.403304740547362,0.584747284438515,0.192423683280659,0.701261413089414,0.226730383615211,0.443971906748129,0,0,0,0,0.549454872801795,0,0,2.82375921308533,2.30162618253588,5.15605962095457,2.23409137046794,1.37016503954128,0.755393897389701,0,0.45032120322422,1.35942722695261,0,0.103787347584177,0,0.512200817262403,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0,0.365855945745545,0,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p2@Rnaseh2b
}}

Revision as of 14:37, 4 August 2015

Short description:p2@Rnaseh2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnaseh2b_5end
Coexpression cluster:NA
Association with transcript: -92bp_to_ENSMUST00000166879_5end
EntrezGene:67153
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rnaseh2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.44e-0823
neuroblast (sensu Vertebrata)4.44e-0823

Uber anatomy
Ontology termp-valuen
occipital lobe2.01e-1510
visual cortex2.01e-1510
neocortex2.01e-1510
cavitated compound organ3.41e-1521
gray matter2.17e-1334
central nervous system2.87e-1273
nervous system7.19e-1275
neural tube1.02e-1152
neural rod1.02e-1152
future spinal cord1.02e-1152
neural keel1.02e-1152
spinal cord2.46e-116
dorsal region element2.46e-116
dorsum2.46e-116
regional part of nervous system2.68e-1154
neurectoderm4.18e-0964
neural plate4.18e-0964
presumptive neural plate4.18e-0964
regional part of cerebral cortex7.30e-0917
ectoderm-derived structure8.55e-0995
ectoderm8.55e-0995
presumptive ectoderm8.55e-0995
posterior neural tube1.11e-0812
chordal neural plate1.11e-0812
brain grey matter1.84e-0829
regional part of telencephalon1.84e-0829
telencephalon1.84e-0829
regional part of spinal cord5.17e-085
gray matter of spinal cord5.17e-085
ecto-epithelium1.04e-0773
kidney1.22e-0714
kidney mesenchyme1.22e-0714
upper urinary tract1.22e-0714
kidney rudiment1.22e-0714
kidney field1.22e-0714
brain1.42e-0747
future brain1.42e-0747
cerebral cortex4.51e-0721
cerebral hemisphere4.51e-0721
pallium4.51e-0721
compound organ9.46e-0743
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