FFCP PHASE1:Mm9::chr14:47906833..47906835,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:47906833..47906835,+|id=chr14:47906833..47906835,+|ontology_enrichment_celltype=CL:0000349!2.56e-22!3;CL:0000351!2.56e-22!3;CL:0002293!3.67e-11!3;CL:0000068!8.12e-11!3;CL:0002202!8.12e-11!3;CL:0000069!8.12e-11!3;CL:0002632!8.12e-11!3;CL:0002368!8.12e-11!3;CL:0000307!8.12e-11!3;CL:0000377!8.12e-11!3;CL:0000215!9.09e-11!3;CL:0000223!1.74e-09!20;CL:0000115!4.39e-09!1;CL:0000213!4.39e-09!1;CL:0002078!4.39e-09!1;CL:0002262!4.39e-09!1;CL:1000398!4.39e-09!1;CL:0002076!2.58e-08!15;CL:0000066!1.41e-07!25|ontology_enrichment_celltype_v019_2=CL:0002293,2.99e-24,3;CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000223,1.23e-14,20;CL:0000066,7.49e-12,25;CL:0002076,3.16e-11,15;CL:0000215,3.18e-07,3;CL:0000068,5.46e-07,3;CL:0002202,5.46e-07,3;CL:0000069,5.46e-07,3;CL:0002632,5.46e-07,3;CL:0002368,5.46e-07,3;CL:0000307,5.46e-07,3;CL:0000377,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!2.56e-22!3;UBERON:0000307!2.56e-22!3;UBERON:0003126!8.12e-11!3;UBERON:0001005!8.12e-11!3;UBERON:0007196!8.12e-11!3;UBERON:0001558!8.12e-11!3;UBERON:0000353!4.39e-09!1;UBERON:0003497!4.39e-09!1;UBERON:0003909!4.39e-09!1;UBERON:0003835!4.39e-09!1;UBERON:0003513!4.39e-09!1;UBERON:0001281!4.39e-09!1;UBERON:0001280!4.39e-09!1;UBERON:0004647!4.39e-09!1;UBERON:0003199!1.74e-08!1|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0003126,5.46e-07,3;UBERON:0001005,5.46e-07,3;UBERON:0007196,5.46e-07,3;UBERON:0001558,5.46e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,4.92769630792852,0,0,0,0,0,0,0,0,1.06001872353102,0,1.28326477414318,2.54805239706646,0,0.432982082022428,0,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:47906833..47906835,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:47906833..47906835,+ | |||
|description=CAGE_peak_at_chr14:47906833..47906835,+ | |||
|id=chr14:47906833..47906835,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.56e-22!3;CL:0000351!2.56e-22!3;CL:0002293!3.67e-11!3;CL:0000068!8.12e-11!3;CL:0002202!8.12e-11!3;CL:0000069!8.12e-11!3;CL:0002632!8.12e-11!3;CL:0002368!8.12e-11!3;CL:0000307!8.12e-11!3;CL:0000377!8.12e-11!3;CL:0000215!9.09e-11!3;CL:0000223!1.74e-09!20;CL:0000115!4.39e-09!1;CL:0000213!4.39e-09!1;CL:0002078!4.39e-09!1;CL:0002262!4.39e-09!1;CL:1000398!4.39e-09!1;CL:0002076!2.58e-08!15;CL:0000066!1.41e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,2.99e-24,3;CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000223,1.23e-14,20;CL:0000066,7.49e-12,25;CL:0002076,3.16e-11,15;CL:0000215,3.18e-07,3;CL:0000068,5.46e-07,3;CL:0002202,5.46e-07,3;CL:0000069,5.46e-07,3;CL:0002632,5.46e-07,3;CL:0002368,5.46e-07,3;CL:0000307,5.46e-07,3;CL:0000377,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!2.56e-22!3;UBERON:0000307!2.56e-22!3;UBERON:0003126!8.12e-11!3;UBERON:0001005!8.12e-11!3;UBERON:0007196!8.12e-11!3;UBERON:0001558!8.12e-11!3;UBERON:0000353!4.39e-09!1;UBERON:0003497!4.39e-09!1;UBERON:0003909!4.39e-09!1;UBERON:0003835!4.39e-09!1;UBERON:0003513!4.39e-09!1;UBERON:0001281!4.39e-09!1;UBERON:0001280!4.39e-09!1;UBERON:0004647!4.39e-09!1;UBERON:0003199!1.74e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0003126,5.46e-07,3;UBERON:0001005,5.46e-07,3;UBERON:0007196,5.46e-07,3;UBERON:0001558,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,4.92769630792852,0,0,0,0,0,0,0,0,1.06001872353102,0,1.28326477414318,2.54805239706646,0,0.432982082022428,0,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:47906833..47906835,+ | |||
}} |
Latest revision as of 08:33, 4 August 2015
Short description: | p@chr14:47906833..47906835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:47906833..47906835, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 2.99e-24 | 3 |
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
endodermal cell | 1.23e-14 | 20 |
epithelial cell | 7.49e-12 | 25 |
endo-epithelial cell | 3.16e-11 | 15 |
barrier cell | 3.18e-07 | 3 |
duct epithelial cell | 5.46e-07 | 3 |
epithelial cell of tracheobronchial tree | 5.46e-07 | 3 |
branched duct epithelial cell | 5.46e-07 | 3 |
epithelial cell of lower respiratory tract | 5.46e-07 | 3 |
respiratory epithelial cell | 5.46e-07 | 3 |
tracheal epithelial cell | 5.46e-07 | 3 |
tracheoblast | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |
trachea | 5.46e-07 | 3 |
respiratory airway | 5.46e-07 | 3 |
tracheobronchial tree | 5.46e-07 | 3 |
lower respiratory tract | 5.46e-07 | 3 |