FFCP PHASE1:Hg19::chr4:109086281..109086319,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000509428_5end | |||
|coexpression_cluster_id=C921 | |||
|description=CAGE_peak_9_at_LEF1_5end | |||
|id=chr4:109086281..109086319,- | |||
|ontology_enrichment_celltype=CL:0000791!7.10e-15!18;CL:0000789!7.10e-15!18;CL:0002420!7.10e-15!18;CL:0002419!7.10e-15!18;CL:0000790!7.10e-15!18;CL:0000084!5.95e-14!25;CL:0000827!5.95e-14!25;CL:0000542!5.38e-11!53;CL:0000051!5.38e-11!53;CL:0000838!2.20e-10!52;CL:0000625!4.52e-10!11;CL:0000624!9.71e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;7.40e-38;25!CL:0000791;1.21e-37;18!CL:0000789;1.21e-37;18!CL:0002419;1.21e-37;18!CL:0000625;2.37e-24;11!CL:0000624;1.71e-17;6!CL:0000542;8.33e-15;53!CL:0000898;2.29e-09;3!CL:0000226;9.52e-09;3!CL:0000842;9.52e-09;3!CL:0000815;3.85e-07;2!CL:0000792;3.85e-07;2!CL:0002677;3.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.04e-38,25;CL:0000827,6.04e-38,25;CL:0000791,9.26e-38,18;CL:0000789,9.26e-38,18;CL:0002420,9.26e-38,18;CL:0002419,9.26e-38,18;CL:0000790,9.26e-38,18;CL:0000542,3.21e-27,53;CL:0000051,3.21e-27,53;CL:0000838,1.33e-25,52;CL:0000625,1.97e-24,11;CL:0000624,1.56e-17,6;CL:0002087,8.50e-12,115;CL:0000738,8.03e-11,136;CL:0000898,2.40e-09,3;CL:0000037,7.67e-09,168;CL:0000226,1.17e-08,3;CL:0000842,1.17e-08,3;CL:0000988,5.12e-08,177;CL:0002031,1.72e-07,120;CL:0000815,4.10e-07,2;CL:0000792,4.10e-07,2;CL:0002677,4.10e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-37;18!CL:0000051;8.33e-15;53 | |||
|ontology_enrichment_disease=DOID:1036!4.98e-07!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.74e-10!15;UBERON:0000179!5.74e-10!15;UBERON:0000463!5.74e-10!15;UBERON:0007023!8.21e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.23e-10;15!UBERON:0000179;3.23e-10;15!UBERON:0000463;3.23e-10;15!UBERON:0002370;1.93e-07;2!UBERON:0005058;1.93e-07;2!UBERON:0009113;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.56e-10,15;UBERON:0000179,4.56e-10,15;UBERON:0000463,4.56e-10,15;UBERON:0002370,2.46e-07,4;UBERON:0005058,2.46e-07,4;UBERON:0009113,2.46e-07,4;UBERON:0003295,2.46e-07,4;UBERON:0005562,2.46e-07,4;UBERON:0000974,8.48e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0.601633342410425,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,3.73748563216283,11.3973121197258,6.7848494669838,5.18278135711102,9.45174573237412,7.101717086021,9.74133642039557,0.668462741311041,4.41908861212256,5.53834736459053,8.6657236404805,0.128091319725675,0.260118695119756,3.28875809207352,3.31620021343018,6.66547097190621,14.3837966267199,17.6576946539211,16.7256838087963,2.15287751125376,1.53288197440768,3.4362744548263,8.34964983664359,5.73417745783374,4.55758417699493,1.90090408889675,6.625305239422,5.37543766848557,0,4.02521328474829,3.28451198768419,1.61285394579786,2.13952156626806,4.63438092424957,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.132529768321485,0.464775771478074,0.310983165046111,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0.822619941626588,0.901029173531752,0.857479297891735,0.336393253036082,0.43596006883328,0.1466765716419,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,2.37190332345469,1.79680250791648,0,0,0,0.167516265334349,0,0,5.9832291840805,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,1.03384013061444,4.52999821719095,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,1.42939065274673,2.05681136543097,0,1.08006287447623,3.96562588147135,0,0,0,1.30062222588003,1.87549976869378,15.4377800066059,5.42049327277996,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.540911356951966,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.455173793141999,0,0,0.689486746482929,0.291604613383254,0.173624994933292,0.885741385813839,0,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0,26.5702575308915,0.941881538370149,1.66211681900156,1.35357396370308,0.19606253431774,0.839107934879214,0.189753732724185,0.635746315921515,0.843992258112108,0,0,3.46221823587346,0,0,0.611030144933625,0.889563386041866,0.494255755786011,0.522109747527277,0.134802265961354,0.802577647298789,0.234264445725339,1.82454789215666,0,0,0,0,0.30607276163049,0.189559738885464,0,0.311064574191741,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.397429223405979,0.0633107959558787,0,0,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0.943225830597996,0,1.9846640872478,1.7785046870815,1.21792598380896,0,0,0,0,0,0.314108192500469,0,0.732157589411779,0.250381861413,0.573409195690071,0,0.0620964029413835,0,0,0.454947352624943,3.71104933608458,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,1.04397716786085,0,0,0,0.179088841081487,0,0,0,0,0,0.76872455576384,0,0,0.276516872303462,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,3.70650201505891,0,0,0.918736432059601,0,0,0,0.205116364240755,0.504143392443436,0.0691572524642179,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0,0,1.07140367175657,1.00885116665647,0,0,0.0887023701626388,0.230467975111559,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.365753774946808,0,0,0,1.45713297917742,0,6.56537558032515,0,1.92008339466232,0,1.66059127923341,0,0,0,0,0,0.392616934229891,0,0,0,0.375935671919414,0.580120991762195,0.299823467774787,0.35710787721131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| |||
|short_description=p9@LEF1 | |||
}} |
Revision as of 02:40, 22 January 2014
Short description: | p9@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LEF1_5end |
Coexpression cluster: | C921_chronic_thymus_CD4_acute_CD8_Hodgkin_Peripheral |
Association with transcript: | 31bp_to_ENST00000509428_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.04e-38 | 25 |
pro-T cell | 6.04e-38 | 25 |
mature alpha-beta T cell | 9.26e-38 | 18 |
alpha-beta T cell | 9.26e-38 | 18 |
immature T cell | 9.26e-38 | 18 |
mature T cell | 9.26e-38 | 18 |
immature alpha-beta T cell | 9.26e-38 | 18 |
lymphocyte | 3.21e-27 | 53 |
common lymphoid progenitor | 3.21e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.33e-25 | 52 |
CD8-positive, alpha-beta T cell | 1.97e-24 | 11 |
CD4-positive, alpha-beta T cell | 1.56e-17 | 6 |
nongranular leukocyte | 8.50e-12 | 115 |
leukocyte | 8.03e-11 | 136 |
naive T cell | 2.40e-09 | 3 |
hematopoietic stem cell | 7.67e-09 | 168 |
single nucleate cell | 1.17e-08 | 3 |
mononuclear cell | 1.17e-08 | 3 |
hematopoietic cell | 5.12e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 1.72e-07 | 120 |
regulatory T cell | 4.10e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.10e-07 | 2 |
naive regulatory T cell | 4.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.56e-10 | 15 |
haemolymphatic fluid | 4.56e-10 | 15 |
organism substance | 4.56e-10 | 15 |
thymus | 2.46e-07 | 4 |
hemolymphoid system gland | 2.46e-07 | 4 |
thymic region | 2.46e-07 | 4 |
pharyngeal gland | 2.46e-07 | 4 |
thymus primordium | 2.46e-07 | 4 |
neck | 8.48e-07 | 10 |