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FFCP PHASE1:Mm9::chr14:16271488..16271516,-: Difference between revisions

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{{FFCP|EntrezGene=218763|HGNC=|MCL_coexpression_id=10|UniProt=Q8VCH9,Q543Z7|association_with_transcript=0bp_to_ENSMUST00000055211,NM_146052,uc007sgu.2_5end|description=CAGE_peak_1_at_Lrrc3b_5end|id=chr14:16271488..16271516,-|ontology_enrichment_celltype=CL:0000117!1.15e-07!23;CL:0000337!1.15e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.15e-08,23;CL:0000337,4.15e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.39e-12!71;UBERON:0003075!1.39e-12!71;UBERON:0007284!1.39e-12!71;UBERON:0001049!1.12e-11!52;UBERON:0005068!1.12e-11!52;UBERON:0006241!1.12e-11!52;UBERON:0007135!1.12e-11!52;UBERON:0000033!1.62e-11!63;UBERON:0001017!4.10e-11!73;UBERON:0005743!4.10e-11!73;UBERON:0000955!1.83e-10!50;UBERON:0006238!1.83e-10!50;UBERON:0000073!2.81e-10!75;UBERON:0001016!2.81e-10!75;UBERON:0002616!5.23e-10!49;UBERON:0004121!1.21e-09!102;UBERON:0000924!1.21e-09!102;UBERON:0006601!1.21e-09!102;UBERON:0003056!5.40e-09!49;UBERON:0000468!1.45e-08!333;UBERON:0003080!2.84e-08!40;UBERON:0002020!3.37e-08!34;UBERON:0002780!7.35e-08!39;UBERON:0001890!7.35e-08!39;UBERON:0006240!7.35e-08!39;UBERON:0003103!3.86e-07!43;UBERON:0007100!4.64e-07!18;UBERON:0000948!4.64e-07!18;UBERON:0005498!4.64e-07!18;UBERON:0004140!4.64e-07!18;UBERON:0009881!4.64e-07!18;UBERON:0004141!4.64e-07!18;UBERON:0003084!4.64e-07!18;UBERON:0007005!4.64e-07!18;UBERON:0004139!4.64e-07!18;UBERON:0004291!4.64e-07!18;UBERON:0000025!7.56e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.57e-18,92;UBERON:0000073,2.78e-13,54;UBERON:0001049,4.78e-12,52;UBERON:0005068,4.78e-12,52;UBERON:0006241,4.78e-12,52;UBERON:0007135,4.78e-12,52;UBERON:0001017,1.28e-11,73;UBERON:0002346,4.71e-11,64;UBERON:0003075,4.71e-11,64;UBERON:0007284,4.71e-11,64;UBERON:0001016,7.42e-11,75;UBERON:0003103,1.72e-09,43;UBERON:0010371,4.06e-09,73;UBERON:0000955,5.08e-09,47;UBERON:0006238,5.08e-09,47;UBERON:0004121,6.79e-09,95;UBERON:0000924,6.79e-09,95;UBERON:0006601,6.79e-09,95;UBERON:0007100,8.79e-09,18;UBERON:0000948,8.79e-09,18;UBERON:0005498,8.79e-09,18;UBERON:0004140,8.79e-09,18;UBERON:0009881,8.79e-09,18;UBERON:0004141,8.79e-09,18;UBERON:0003084,8.79e-09,18;UBERON:0007005,8.79e-09,18;UBERON:0004139,8.79e-09,18;UBERON:0004291,8.79e-09,18;UBERON:0002616,1.62e-08,46;UBERON:0002020,2.72e-08,34;UBERON:0000025,2.72e-08,114;UBERON:0004111,5.71e-08,122;UBERON:0003080,1.52e-07,40;UBERON:0003056,2.02e-07,49;UBERON:0002780,4.40e-07,39;UBERON:0001890,4.40e-07,39;UBERON:0006240,4.40e-07,39|phase1_expression=1.44133962394315,0.697950815278722,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,4.24864567805155,6.34789175126439,3.80298842103708,0.677689064138264,0,0,0,0,0.599200221036809,0,0,0,0.210324961351382,8.2838785477103,9.718215801871,0.857435594504678,0.575072826109418,0.919218786610021,11.0115880999389,3.06449611404451,2.91852413186863,5.67111037239834,6.12967212136145,6.77187381723788,3.35019598801657,4.50210088025344,3.81995619442025,6.48182888042069,4.12877874317399,5.59198337475902,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,1.8125651855302,2.67195850316685,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,0.940709657085638,1.13099932196708,0,0.578397427679647,0,0.161766849947409,1.10420759230197,0,0,16.9812862266697,15.7085030110091,0.510914110417183,0,0,0,3.14560342750128,1.83000241127451,4.02093926761166,1.56441888173049,0.767146371990992,5.194701113989,0.973447578406546,0.203678727700633,0,0.252722758433675,2.94618598241064,0.260240885925407,1.14951052216736,1.26043490863744,0.60281927134286,0.612328492361951,1.5373646434182,0.843315521037559,3.88055056108524,0.431135985865684,0.567318240503458,0.703804496655795,0,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,2.07125772535502,1.87620847984877,1.98068267607116,2.13070262026689,4.32881309844288,4.31947916084659,8.37122201101468,7.24338183778972,4.55384835231961,10.0381508447223,20.685100473966,43.0475378688494,44.7371961521517,46.5446244417027,33.1489854338118,0.841159794256509,0.514523061896422,0,0.793351699990633,2.77274725695804,1.62565670302307,1.28867461322093,0.605050573870028,1.11189021922435,1.33157938278791,0.949058123089023,0.658795818896044,0.502670417600539,0.397912944082302,1.16978452271472,0.898819408654221,0.432276099749388,0.199141273254367,2.65535061334314,1.37098215131675,0,2.24016460629846,0.581857461502877,1.19230893813542,2.40298841072178,1.77132177575523,2.04098346193787,1.48076596706161,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.814824882210129,1.01847051465113,1.17345124144251,1.50755631697634,1.42826184531608,0.195133647857799,0.472905432318573,0.44292937929755,2.07291199254733,1.310906517725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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:218763
|HGNC=
|MCL_coexpression_id=10
|TSSclassifier=NA
|UniProt=uniprot:Q8VCH9,uniprot:Q543Z7
|association_with_transcript=0bp_to_ENSMUST00000055211,NM_146052,uc007sgu.2_5end
|cluster_id=chr14:16271488..16271516,-
|description=CAGE_peak_1_at_Lrrc3b_5end
|id=chr14:16271488..16271516,-
|ontology_enrichment_celltype=CL:0000117!1.15e-07!23;CL:0000337!1.15e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.15e-08,23;CL:0000337,4.15e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.39e-12!71;UBERON:0003075!1.39e-12!71;UBERON:0007284!1.39e-12!71;UBERON:0001049!1.12e-11!52;UBERON:0005068!1.12e-11!52;UBERON:0006241!1.12e-11!52;UBERON:0007135!1.12e-11!52;UBERON:0000033!1.62e-11!63;UBERON:0001017!4.10e-11!73;UBERON:0005743!4.10e-11!73;UBERON:0000955!1.83e-10!50;UBERON:0006238!1.83e-10!50;UBERON:0000073!2.81e-10!75;UBERON:0001016!2.81e-10!75;UBERON:0002616!5.23e-10!49;UBERON:0004121!1.21e-09!102;UBERON:0000924!1.21e-09!102;UBERON:0006601!1.21e-09!102;UBERON:0003056!5.40e-09!49;UBERON:0000468!1.45e-08!333;UBERON:0003080!2.84e-08!40;UBERON:0002020!3.37e-08!34;UBERON:0002780!7.35e-08!39;UBERON:0001890!7.35e-08!39;UBERON:0006240!7.35e-08!39;UBERON:0003103!3.86e-07!43;UBERON:0007100!4.64e-07!18;UBERON:0000948!4.64e-07!18;UBERON:0005498!4.64e-07!18;UBERON:0004140!4.64e-07!18;UBERON:0009881!4.64e-07!18;UBERON:0004141!4.64e-07!18;UBERON:0003084!4.64e-07!18;UBERON:0007005!4.64e-07!18;UBERON:0004139!4.64e-07!18;UBERON:0004291!4.64e-07!18;UBERON:0000025!7.56e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.57e-18,92;UBERON:0000073,2.78e-13,54;UBERON:0001049,4.78e-12,52;UBERON:0005068,4.78e-12,52;UBERON:0006241,4.78e-12,52;UBERON:0007135,4.78e-12,52;UBERON:0001017,1.28e-11,73;UBERON:0002346,4.71e-11,64;UBERON:0003075,4.71e-11,64;UBERON:0007284,4.71e-11,64;UBERON:0001016,7.42e-11,75;UBERON:0003103,1.72e-09,43;UBERON:0010371,4.06e-09,73;UBERON:0000955,5.08e-09,47;UBERON:0006238,5.08e-09,47;UBERON:0004121,6.79e-09,95;UBERON:0000924,6.79e-09,95;UBERON:0006601,6.79e-09,95;UBERON:0007100,8.79e-09,18;UBERON:0000948,8.79e-09,18;UBERON:0005498,8.79e-09,18;UBERON:0004140,8.79e-09,18;UBERON:0009881,8.79e-09,18;UBERON:0004141,8.79e-09,18;UBERON:0003084,8.79e-09,18;UBERON:0007005,8.79e-09,18;UBERON:0004139,8.79e-09,18;UBERON:0004291,8.79e-09,18;UBERON:0002616,1.62e-08,46;UBERON:0002020,2.72e-08,34;UBERON:0000025,2.72e-08,114;UBERON:0004111,5.71e-08,122;UBERON:0003080,1.52e-07,40;UBERON:0003056,2.02e-07,49;UBERON:0002780,4.40e-07,39;UBERON:0001890,4.40e-07,39;UBERON:0006240,4.40e-07,39
|phase1_expression=1.44133962394315,0.697950815278722,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,4.24864567805155,6.34789175126439,3.80298842103708,0.677689064138264,0,0,0,0,0.599200221036809,0,0,0,0.210324961351382,8.2838785477103,9.718215801871,0.857435594504678,0.575072826109418,0.919218786610021,11.0115880999389,3.06449611404451,2.91852413186863,5.67111037239834,6.12967212136145,6.77187381723788,3.35019598801657,4.50210088025344,3.81995619442025,6.48182888042069,4.12877874317399,5.59198337475902,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,1.8125651855302,2.67195850316685,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,0.940709657085638,1.13099932196708,0,0.578397427679647,0,0.161766849947409,1.10420759230197,0,0,16.9812862266697,15.7085030110091,0.510914110417183,0,0,0,3.14560342750128,1.83000241127451,4.02093926761166,1.56441888173049,0.767146371990992,5.194701113989,0.973447578406546,0.203678727700633,0,0.252722758433675,2.94618598241064,0.260240885925407,1.14951052216736,1.26043490863744,0.60281927134286,0.612328492361951,1.5373646434182,0.843315521037559,3.88055056108524,0.431135985865684,0.567318240503458,0.703804496655795,0,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,2.07125772535502,1.87620847984877,1.98068267607116,2.13070262026689,4.32881309844288,4.31947916084659,8.37122201101468,7.24338183778972,4.55384835231961,10.0381508447223,20.685100473966,43.0475378688494,44.7371961521517,46.5446244417027,33.1489854338118,0.841159794256509,0.514523061896422,0,0.793351699990633,2.77274725695804,1.62565670302307,1.28867461322093,0.605050573870028,1.11189021922435,1.33157938278791,0.949058123089023,0.658795818896044,0.502670417600539,0.397912944082302,1.16978452271472,0.898819408654221,0.432276099749388,0.199141273254367,2.65535061334314,1.37098215131675,0,2.24016460629846,0.581857461502877,1.19230893813542,2.40298841072178,1.77132177575523,2.04098346193787,1.48076596706161,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.814824882210129,1.01847051465113,1.17345124144251,1.50755631697634,1.42826184531608,0.195133647857799,0.472905432318573,0.44292937929755,2.07291199254733,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0.275936746304732,2.40825884981688,1.28932855251423,0,1.76729649043061,0.631016438832513,1.17131623288992,0.646270193198397,0.238968797952552,0,0,0,0.584511715822624,1.18586333383957,3.53453448063988,0.99358059645788,0.534196811001766,0.488660878060728,2.3095817216155,0,1.94224508923985,2.11626489875326,1.13163047853539,0,0.614870295887855,1.03371317267288,0.363533729477506,1.06949213515416,0,0,0,5.44703369206061,1.08036656418786,1.29358683782755,1.92903331528433,1.95074257006501,1.78368817602071,1.48094118541909,0.913394847343798,1.40803024838226,0.63549621259146,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,2.78137953015765,0,3.09580301944834,2.03713980106683,0.565105371014073,0,0.457556346413045,0,0,0,3.81868247206045,1.58167996790568,1.01659733563424,0.540026704109006,1.04544148007234,0.87345025498471,0.809186078308924,0.41326727862668,1.04702376793612,0.259229946583586,0,0,0.747582730219894,0.165458490457098,0,0.387479470433193,0.168956125490778,0.117357238645754,0.651021924219751,0.209718688851422,0,0.288030006257865,0.632022241256357,0.405450430580328,0.718976700153791,0.129920822977795,0.358053391334963,0,0.360586348559907,1.18151621739662,0.605798699688886,0.457240839929999,0.806609481094724,0.682205165178267,0.865906574762965,0.467507608726276,1.81384306892169,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0,0,6.21227026878773,3.22227665555024,5.72895513439397,3.43706364687375,3.42541259885321,2.2661816921691,2.02506750069542,1.35096360967266,1.81256963593682,4.14208249401456,0.518936737920883,1.19707462020309,0.682934423016537,1.21553358534147,0.628839487883947,1.47074806760011,2.00022055021454,2.47242068686673,0.962757628775446,1.26348605881899,2.28131369901216,1.88626341386076,1.68554713445788,1.28050304809739,1.43588672389033,2.38146845641537,1.39061191133827,1.92909220463705,1.23625770240992,1.61918812147837,2.74295401908332,2.12970967391205,2.62279808942053,1.59881058295561,1.69396884747595,1.77690676572521,1.46342378298218,1.8414879800649,1.7654534799962,1.12228454331548,1.77952527186261,0.886540341380071,2.45538625901814,1.08455788830176,1.73615949883027,3.49734809113124,1.16965804222704,1.71896843238639,0.57386499620653,1.54413993383661,1.39120701372253
|short_description=p1@Lrrc3b
}}

Revision as of 01:50, 4 August 2015

Short description:p1@Lrrc3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrc3b_5end
Coexpression cluster:MCL_coexpression_mm9:10
Association with transcript: 0bp_to_ENSMUST00000055211, NM_146052, uc007sgu.2_5end
EntrezGene:218763
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrc3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I215.71
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I210.04
heart, neonate N10.CNhs11118.749-24G120.69
heart, neonate N16.CNhs11209.782-15G143.05
heart, neonate N20.CNhs11127.821-26I644.74
heart, neonate N25.CNhs11196.1351-25D346.54
heart, neonate N30.CNhs11202.1390-42D233.15
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.15e-0823
neuroblast (sensu Vertebrata)4.15e-0823

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.57e-1892
regional part of nervous system2.78e-1354
neural tube4.78e-1252
neural rod4.78e-1252
future spinal cord4.78e-1252
neural keel4.78e-1252
central nervous system1.28e-1173
neurectoderm4.71e-1164
neural plate4.71e-1164
presumptive neural plate4.71e-1164
nervous system7.42e-1175
compound organ1.72e-0943
ecto-epithelium4.06e-0973
brain5.08e-0947
future brain5.08e-0947
ectoderm-derived structure6.79e-0995
ectoderm6.79e-0995
presumptive ectoderm6.79e-0995
primary circulatory organ8.79e-0918
heart8.79e-0918
primitive heart tube8.79e-0918
primary heart field8.79e-0918
anterior lateral plate mesoderm8.79e-0918
heart tube8.79e-0918
heart primordium8.79e-0918
cardiac mesoderm8.79e-0918
cardiogenic plate8.79e-0918
heart rudiment8.79e-0918
regional part of brain1.62e-0846
gray matter2.72e-0834
tube2.72e-08114
anatomical conduit5.71e-08122
anterior neural tube1.52e-0740
pre-chordal neural plate2.02e-0749
regional part of forebrain4.40e-0739
forebrain4.40e-0739
future forebrain4.40e-0739
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