FFCP PHASE1:Mm9::chr14:121434706..121434722,+: Difference between revisions
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{{FFCP|EntrezGene=223254|HGNC=|UniProt=F8VPU2|association_with_transcript=-63bp_to_ENSMUST00000026635_5end|description=CAGE_peak_5_at_Farp1_5end|id=chr14:121434706..121434722,+|ontology_enrichment_celltype=CL:0000117!2.69e-09!23;CL:0000337!2.69e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-09,23;CL:0000337,1.22e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.18e-16!34;UBERON:0001049!1.59e-15!52;UBERON:0005068!1.59e-15!52;UBERON:0006241!1.59e-15!52;UBERON:0007135!1.59e-15!52;UBERON:0002780!4.20e-14!39;UBERON:0001890!4.20e-14!39;UBERON:0006240!4.20e-14!39;UBERON:0003080!7.87e-14!40;UBERON:0003056!3.64e-13!49;UBERON:0001017!5.20e-13!73;UBERON:0005743!5.20e-13!73;UBERON:0000955!5.28e-13!50;UBERON:0006238!5.28e-13!50;UBERON:0002791!8.75e-13!29;UBERON:0003528!8.75e-13!29;UBERON:0001893!8.75e-13!29;UBERON:0002616!1.02e-12!49;UBERON:0002346!1.23e-12!71;UBERON:0003075!1.23e-12!71;UBERON:0007284!1.23e-12!71;UBERON:0000033!4.93e-12!63;UBERON:0000073!5.94e-12!75;UBERON:0001016!5.94e-12!75;UBERON:0000956!7.12e-12!21;UBERON:0001869!7.12e-12!21;UBERON:0000203!7.12e-12!21;UBERON:0004121!8.14e-12!102;UBERON:0000924!8.14e-12!102;UBERON:0006601!8.14e-12!102;UBERON:0002619!1.20e-09!17;UBERON:0000468!7.84e-09!333;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10;UBERON:0000922!5.95e-07!328;UBERON:0000025!6.13e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.24e-16,34;UBERON:0010371,6.19e-16,73;UBERON:0000073,2.45e-15,54;UBERON:0001049,2.68e-15,52;UBERON:0005068,2.68e-15,52;UBERON:0006241,2.68e-15,52;UBERON:0007135,2.68e-15,52;UBERON:0002780,1.36e-14,39;UBERON:0001890,1.36e-14,39;UBERON:0006240,1.36e-14,39;UBERON:0002346,1.94e-14,64;UBERON:0003075,1.94e-14,64;UBERON:0007284,1.94e-14,64;UBERON:0003080,2.62e-14,40;UBERON:0003528,2.07e-13,29;UBERON:0002791,2.07e-13,29;UBERON:0001893,2.07e-13,29;UBERON:0000955,2.49e-13,47;UBERON:0006238,2.49e-13,47;UBERON:0003056,2.50e-13,49;UBERON:0002616,5.07e-13,46;UBERON:0000956,9.08e-13,21;UBERON:0001869,9.08e-13,21;UBERON:0000203,9.08e-13,21;UBERON:0004121,1.33e-12,95;UBERON:0000924,1.33e-12,95;UBERON:0006601,1.33e-12,95;UBERON:0001017,2.37e-12,73;UBERON:0001016,2.34e-11,75;UBERON:0002619,2.38e-10,17;UBERON:0002021,9.76e-08,10;UBERON:0000411,9.76e-08,10;UBERON:0001950,9.76e-08,10|phase1_expression=1.92178616525753,1.39590163055744,2.27499619694768,2.41971369045464,0.500895729946347,1.00727563147134,0.934450562382103,0,0.140788722151667,0,0.34243593645101,0,0,0,0,0,0,0,0.274228867211478,0,1.78590909317247,0.397163804803541,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,0,0.861884930743556,0.380046838912748,1.51218077855958,0.665191531965914,0,0,0,1.44425809875637,0.831173226792462,1.42918549383658,0,0,0,0,0,0,0.755380907853464,1.4192770370732,1.46837401729345,0.782391344348039,0.872100625521786,1.31811709640683,2.13872888981712,0.979904951377538,1.43752564364972,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,6.47412674750713,3.70293685490423,3.80298842103708,2.71075625655306,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,0.384218305321555,2.7996195323289,6.07526722492608,3.78584930432488,3.42781181284564,2.87129103237098,3.79721477566358,3.06705507258356,4.5960939330501,2.20231761998777,1.14918604276669,0.921639199537461,7.12185953743047,6.03818447775904,7.29278718779464,0.279182999001381,1.68828783009504,1.5279824777681,5.30331453852602,4.8406371471695,6.33758115806022,0.075726193333184,0.529000920747499,2.31891590961342,0.860423876981386,0.679971333707751,0.539703191637817,1.29955283489534,0.896053774194671,0.983110940922263,0.852151612890289,0.519572009205738,1.06001872353102,0.985903938436763,1.28326477414318,2.54805239706646,0,0.865964164044856,1.01343946190039,2.02209778005913,0.79928715803342,0.258937883647172,0.593768556259299,0.693941307064543,1.21786191324856,1.15307748628029,0.60289056221049,1.17588707135705,0.628332956648377,1.73036477414062,0.578397427679647,0,1.13236794963186,0.220841518460394,0.969750506270444,1.86391761218122,2.34224637609238,1.46612694769419,1.78819938646014,0,0,0,1.19832511523858,0.915001205637253,5.40313714085317,3.99795936442236,4.09144731728529,0.83115217823824,2.75810147215188,1.62942982160506,0.870848794270651,2.0217820674694,1.47309299120532,2.08192708740326,1.37941262660084,1.98068342785884,0.60281927134286,2.58538696775046,1.15302348256365,1.59292931751539,0.776110112217047,2.37124792226126,2.45837904218165,2.28736461413134,1.7535658594206,1.11218899690239,1.0447564995665,1.4404749548556,1.59227413454795,0,0,0,1.65700618028402,1.64168241986767,1.44049649168812,0.946978942340841,0.787056926989615,0.925602677324269,1.16266972375204,0.268273401399619,0.817357396570186,0.16455984991348,0,0.56748166682099,0.877199924551994,0.219550115291051,0.268412837520744,2.52347938276953,5.35103984372279,0.991256348951394,1.58670339998127,0.426576501070468,2.55460339046482,1.28867461322093,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:223254 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VPU2 | |||
|association_with_transcript=-63bp_to_ENSMUST00000026635_5end | |||
|cluster_id=chr14:121434706..121434722,+ | |||
|description=CAGE_peak_5_at_Farp1_5end | |||
|id=chr14:121434706..121434722,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.69e-09!23;CL:0000337!2.69e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-09,23;CL:0000337,1.22e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.18e-16!34;UBERON:0001049!1.59e-15!52;UBERON:0005068!1.59e-15!52;UBERON:0006241!1.59e-15!52;UBERON:0007135!1.59e-15!52;UBERON:0002780!4.20e-14!39;UBERON:0001890!4.20e-14!39;UBERON:0006240!4.20e-14!39;UBERON:0003080!7.87e-14!40;UBERON:0003056!3.64e-13!49;UBERON:0001017!5.20e-13!73;UBERON:0005743!5.20e-13!73;UBERON:0000955!5.28e-13!50;UBERON:0006238!5.28e-13!50;UBERON:0002791!8.75e-13!29;UBERON:0003528!8.75e-13!29;UBERON:0001893!8.75e-13!29;UBERON:0002616!1.02e-12!49;UBERON:0002346!1.23e-12!71;UBERON:0003075!1.23e-12!71;UBERON:0007284!1.23e-12!71;UBERON:0000033!4.93e-12!63;UBERON:0000073!5.94e-12!75;UBERON:0001016!5.94e-12!75;UBERON:0000956!7.12e-12!21;UBERON:0001869!7.12e-12!21;UBERON:0000203!7.12e-12!21;UBERON:0004121!8.14e-12!102;UBERON:0000924!8.14e-12!102;UBERON:0006601!8.14e-12!102;UBERON:0002619!1.20e-09!17;UBERON:0000468!7.84e-09!333;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10;UBERON:0000922!5.95e-07!328;UBERON:0000025!6.13e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.24e-16,34;UBERON:0010371,6.19e-16,73;UBERON:0000073,2.45e-15,54;UBERON:0001049,2.68e-15,52;UBERON:0005068,2.68e-15,52;UBERON:0006241,2.68e-15,52;UBERON:0007135,2.68e-15,52;UBERON:0002780,1.36e-14,39;UBERON:0001890,1.36e-14,39;UBERON:0006240,1.36e-14,39;UBERON:0002346,1.94e-14,64;UBERON:0003075,1.94e-14,64;UBERON:0007284,1.94e-14,64;UBERON:0003080,2.62e-14,40;UBERON:0003528,2.07e-13,29;UBERON:0002791,2.07e-13,29;UBERON:0001893,2.07e-13,29;UBERON:0000955,2.49e-13,47;UBERON:0006238,2.49e-13,47;UBERON:0003056,2.50e-13,49;UBERON:0002616,5.07e-13,46;UBERON:0000956,9.08e-13,21;UBERON:0001869,9.08e-13,21;UBERON:0000203,9.08e-13,21;UBERON:0004121,1.33e-12,95;UBERON:0000924,1.33e-12,95;UBERON:0006601,1.33e-12,95;UBERON:0001017,2.37e-12,73;UBERON:0001016,2.34e-11,75;UBERON:0002619,2.38e-10,17;UBERON:0002021,9.76e-08,10;UBERON:0000411,9.76e-08,10;UBERON:0001950,9.76e-08,10 | |||
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| |||
|short_description=p5@Farp1 | |||
}} |
Revision as of 00:08, 4 August 2015
Short description: | p5@Farp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Farp1_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_ENSMUST00000026635_5end |
EntrezGene: | 223254 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.24e-16 | 34 |
ecto-epithelium | 6.19e-16 | 73 |
regional part of nervous system | 2.45e-15 | 54 |
neural tube | 2.68e-15 | 52 |
neural rod | 2.68e-15 | 52 |
future spinal cord | 2.68e-15 | 52 |
neural keel | 2.68e-15 | 52 |
regional part of forebrain | 1.36e-14 | 39 |
forebrain | 1.36e-14 | 39 |
future forebrain | 1.36e-14 | 39 |
neurectoderm | 1.94e-14 | 64 |
neural plate | 1.94e-14 | 64 |
presumptive neural plate | 1.94e-14 | 64 |
anterior neural tube | 2.62e-14 | 40 |
brain grey matter | 2.07e-13 | 29 |
regional part of telencephalon | 2.07e-13 | 29 |
telencephalon | 2.07e-13 | 29 |
brain | 2.49e-13 | 47 |
future brain | 2.49e-13 | 47 |
pre-chordal neural plate | 2.50e-13 | 49 |
regional part of brain | 5.07e-13 | 46 |
cerebral cortex | 9.08e-13 | 21 |
cerebral hemisphere | 9.08e-13 | 21 |
pallium | 9.08e-13 | 21 |
ectoderm-derived structure | 1.33e-12 | 95 |
ectoderm | 1.33e-12 | 95 |
presumptive ectoderm | 1.33e-12 | 95 |
central nervous system | 2.37e-12 | 73 |
nervous system | 2.34e-11 | 75 |
regional part of cerebral cortex | 2.38e-10 | 17 |
occipital lobe | 9.76e-08 | 10 |
visual cortex | 9.76e-08 | 10 |
neocortex | 9.76e-08 | 10 |