FFCP PHASE1:Hg19::chr3:8543591..8543602,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6633 | |||
|TSSclassifier=strong | |||
|UniProt=F8WB09 | |||
|association_with_transcript=17bp_to_ENST00000456506_5end | |||
|coexpression_cluster_id=C2756 | |||
|description=CAGE_peak_4_at_LMCD1_5end | |||
|id=chr3:8543591..8543602,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.94e-09!180;CL:0000136!9.36e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.79e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.02e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.44e-10!365;UBERON:0002100!5.07e-10!216;UBERON:0003103!1.69e-09!69;UBERON:0000483!3.70e-08!309;UBERON:0000119!6.89e-08!312;UBERON:0002417!1.26e-07!61;UBERON:0000916!1.26e-07!61;UBERON:0009569!1.64e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.02e-07;9!UBERON:0000042;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,2.77e-08,68;UBERON:0002100,3.09e-08,199;UBERON:0004457,4.36e-08,12;UBERON:0000042,4.36e-08,12;UBERON:0002417,1.77e-07,60;UBERON:0000916,1.77e-07,60;UBERON:0009569,9.13e-07,112 | |||
|phase1_expression=3.81524596468169,3.8538094300377,4.08767771878316,4.00293193412522,2.68176656656373,2.61701557230111,0,1.89515962028049,1.04474251279935,1.22866968250754,2.09340350391728,2.40285509343189,1.84636884759917,0,0.331397375727916,0,0,0,0,2.83178433576612,1.22400414746552,3.44800193625897,2.0036519099174,0.958120975510189,2.51085279189606,1.75750833220288,1.39571002064908,2.04648031415566,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0.668745981562712,0.651844533267181,0,0,0.668462741311041,0.883817722424512,1.10766947291811,1.35401931882508,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.40648818027883,0.722878304769133,1.50401373190767,1.73815822752988,1.5905718941022,1.94653948121054,2.07976597760949,1.55210578223795,1.75669571386252,1.63723844372141,0,0.370784442784429,0,0,0.132957960518865,0,0,0,1.59009925893364,0,1.04142150482278,0,0.838998872419812,0,0.626984899610432,0,0,1.00416183829401,0.805658634218294,0,0.24406205754817,0.735326160691737,0,0.714397826272638,0.22452937262617,0.450445921933289,0,0,0.549605231791222,0,0,0,0.993943903390637,2.78587125662075,1.72131935057184,1.14734648299525,0.709336764396714,1.12135520028461,1.06748995729705,0.98667019366864,1.55605517699883,0.808264032418128,0.163461903113459,0.908144565869588,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,1.05691048779388,2.26622122115384,1.82586048712923,0,0.368502951935304,0,1.18800285728205,0.494533858557114,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0,0.438977620880838,1.22595118319608,0.600952235626387,0.907457465280168,1.25572744982203,1.70845911054854,1.05965950579781,0.600182192168805,1.44273540933814,1.54584324027377,0.37223371266318,1.35021065793013,0.779496041289589,1.7670364197088,2.02509777013059,0,0.710019185033229,0.906768884048762,0.339121184620975,0.386521706326594,0.272746120590835,0,0.365921118388786,0.795178609928912,0.580969714347592,0.518305275076852,0.252320850875628,0,0,1.28648187638577,1.38134921352481,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,1.47008711385542,0,0,1.18157981336281,0,0.860919069801795,0.514703430895577,0.439001141634502,0,0.100528972411631,0.0925884451585296,0.651616610620649,0,1.44331342025273,1.15930404975077,1.17408694235822,0.288732895522148,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,1.87467667973554,2.01578553838631,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,1.33345578013555,1.14596527667483,0,0,1.7480673759565,1.8020583470635,1.14330573052231,0.224262168690721,0,0.2933531432838,1.68053230485111,0,2.535908257668,0.797814349754612,2.08014873822732,2.05765899409714,0,1.0656887160644,1.28680194292333,3.25572963234866,3.29296134712308,0.977208552881205,1.06617584622764,3.16780749173372,1.20575750823834,1.74306691720059,1.19967589418468,0,0,0,0.239624855491583,0,0,1.59259437334337,0.61642896765115,1.07436577943937,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,0.892144943985809,0.473107245101804,0.234282829985426,1.80567659836631,4.5481500811197,2.0694614258501,0,0.737476674166813,0.260650843404249,0.587403472388222,0,0,0,0.106727557803444,0.606255142892519,4.99306318531491,5.74541557326393,2.97729369382532,4.29693525206575,3.64858122762996,2.94720043288112,6.65219423786715,3.05622450172854,1.48418066444991,0.925258162815933,1.42049380250502,0.246381468041427,0,0.464841513839837,2.65890789101569,0.601519410909855,0.0920809889358963,0.114814448164607,0,0.262248829918848,0.451199612907412,0.924184045252977,4.70609861506113,1.46139224653261,1.68882606228601,1.13733384070897,0,0.863663664408557,1.54227252690289,2.70946437543853,3.51182841698397,0.764628819135115,2.49322802678617,2.23874754722178,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0.824328093181778,1.46511143709349,0.82509499920588,0,0.650060246036521,0,0.386682873168488,0.924291702687866,1.22802939780904,2.06754858726796,2.25582514223375,1.30515024522806,0.511359764496605,1.78064071293475,0.165284915360978,0,0.638063562472921,0,0.929691098594572,1.25924938732256,1.3940745403212,0,0.532306030317022,0,0.37064843820784,0.286249773483982,1.116475108079,1.89827654831236,2.66882271493355,0.767693373934002,0,0.95460974377781,0,1.2591072030832,0.823611089208164,1.64937363283961,0,1.58510321173008,0.421258456238981,1.46290121726877,0,0,0.409499734223957,0.565621727814851,2.26016233240486,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,2.15117028306077,1.3754865741837,0.35667105148125,0.354761064070598,1.89996871767898,1.31717957183961,0.379473173765715,0,0,0,0,0.564862804660675,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,1.92495971052672,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0.556812347790485,0,0.540911356951966,1.6653598399891,2.81974010175699,0.561421621224659,7.91144168068228,0.485442086998054,1.67165076416218,0.284136146806413,0,0,0,0,0.422008249231538,0.445234820091624,0,0,7.17292757703851,1.10513566212459,2.77126022639704,2.86352311006033,0,2.17727711363265,1.52776196950456,0.179021174675609,0,1.7755813014648,0,1.11136990144637,0,0.463840490809256,0,1.04171104434093,1.13697999995054,2.17499872630438,0.341380344856499,1.77977555204936,0,1.03423011972439,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0.278847488557207,1.00035336054936,1.70913083770502,0,0.538545866458633,0,1.5950057986596,1.74035427463538,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0,0,0,2.95397290339238,1.63232808159148,1.83758992864123,0,0,0.796118080530053,0,3.55825354416746,6.67245270311115,6.57858281884369,0.741412462787447,3.21031058919516,0,0,0,0,0.394584402849391,1.20990716048664,0.30607276163049,2.0851571277401,1.05226393590145,1.24425829676697,0.664653872707185,0.330991955875499,0,1.19472429772959,0,0.832048038078832,0,0,2.00236175134926,2.27144668714639,0.687944129886466,0,0,0,0.775912131907355,2.91245218081951,0.451961481561065,0.411125773940253,0.993573058514948,0.379864775735272,0.586654148204409,0.400794101257669,2.77488893161158,0.39961921916426,1.58499458869517,0.458146384663663,1.02956998717179,0.14405479798815,0.248505071130865,0,0,0.418411385249333,0.305994652908965,0,0,0.136905378891993,0,1.28929632425987,1.31443677139657,1.95497680890578,4.12488763221031,2.15361907373044,1.79711100449092,2.57535628881943,3.34757186162809,5.64341168888501,0.720599767084807,0,0.551482276150566,1.15382201733633,0.876246070104404,1.27955725969173,0,0,0.272406812223151,0.964518890790115,1.37539436597234,2.07720169014593,1.349843349309,0.77380195455795,0.425246896606173,0,1.49730843868477,1.46872846777995,0,0.179287339332845,1.34340638123612,3.57347663186684,3.31045985182716,0.5085370753095,2.71499800876856,0,0.979762080328227,0,0.082092520749339,0.170388021785422,1.47305718976163,0.293104467356165,0,0.646414781807753,0.26446520348538,2.05304205461195,0,1.81538601365081,2.67247318669432,2.07119527673598,1.48849806543585,0,1.33971858218986,0,4.89616023032527,5.5151776684994,7.35229384232308,2.95085367638824,0.942324577501406,0,0.244052529803926,0.250381861413,1.72022758707021,0.443716206147409,1.36612086471044,0,0.74988244777264,0.454947352624943,3.14011866899464,0,0,0.724605143054126,2.08956724041624,2.10341978862502,1.10961172300523,2.08343305802598,2.0125432140206,0,0.686520205190771,1.36107831386915,0.621748802331122,0.443565449968902,0.63718706865481,0,1.39736661188633,0.414706207840855,0.797525143673985,2.08698024724694,1.35231848097497,1.14241563650639,1.22061219961398,1.63663793282303,2.04080058380728,3.24823631914946,2.3885753321917,5.60038870528415,1.37358282073117,0.336749488765919,0,0.192619830407303,0.428883182749851,0.260994291965212,0.906823702049089,0,0.244736704506468,0,0.308801447160972,1.53498834705095,0.883445729729405,0,0.168942440653073,0,0,0.303859956177382,0,1.94860308839388,2.25870228532717,2.78061170234935,0.327609848846413,1.72041036127604,0,1.59989916683944,0.426766918776564,0,0,0,0,0,0,0.431299245586727,0,0.109209638192014,2.20652288940233,0.850299680406731,0,0,1.59002175326709,0,1.60114149657094,0,0,0.321146125482298,0,0.159633859057151,1.02558182120378,0.252071696221718,0.276629009856872,0.484426936895553,0,0,0,0,0,1.90691047733584,0,0,1.50420656698514,1.81534561833168,1.56302802246618,0,1.14640342257068,0.887136517302272,0.945526184657525,0,0.413373593002368,0.380494861163441,0,0.548257766857182,1.48863353516788,0.351742488719241,0.255524855279191,3.21421101526972,0.672567444437648,0,0.455324382702595,0.620916591138472,2.30467975111558,4.97315227368514,0.543757863814654,0,1.53651993149159,0.222462803784138,2.11931350696388,0.157115589916002,0,0.913158720509496,2.80705868584208,0,1.21510125100316,1.10609528212909,0,0.521574816907738,0,0,0,0,6.88363774112444,0,0,0.846774100381858,0.4582137370881,0,0,0,2.15930513953535,0,9.71143255781842,8.41835016221226,4.6392577253528,2.91426595835484,3.27515248846948,1.79055697645231,0.237840181555137,0,0.549702583727146,4.67984815056688,0.231522474323834,0,1.88126918544609,2.94177986104687,0,0.785233868459781,0,1.2679671827502,1.35941691750254,2.6315497034359,1.86927875123374,0,0,0,0.962896400270019,0,0.917458566809082,0,2.36657343289777,0.747906392100062,0.436350690340377,0,0.371995018166751,2.77305377178851,1.29787968637137,0.126166424835079,0.327796715891087,4.43444753540029,0.203977659483963,0.534434810531121,0,0,2.57647573942014,0.803892390468535,1.65833887891756,0.413731983447581,5.11761556562354,2.14257988317366,0.193766729508018,0.372448285775147,1.90624166387043,0.381882949668989,0.606351566874658,3.9189014621453,3.76456631193809,1.48174516632093,1.14755528628282,0.665320713092027,1.95367844666339,1.06727345877715,0,0,0,1.58913877437726,0.406896178315738,3.32878387092756,0.603821380773079,0.961705476909699 | |||
|short_description=p4@LMCD1 | |||
}} |
Revision as of 17:09, 21 January 2014
Short description: | p4@LMCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LMCD1_5end |
Coexpression cluster: | C2756_skeletal_Adipocyte_mature_Preadipocyte_Hepatic_Mesenchymal_aorta |
Association with transcript: | 17bp_to_ENST00000456506_5end |
EntrezGene: | LMCD1 |
HGNC: | 6633 |
UniProt: | F8WB09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.02e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
compound organ | 2.77e-08 | 68 |
trunk | 3.09e-08 | 199 |
cavity lining | 4.36e-08 | 12 |
serous membrane | 4.36e-08 | 12 |
abdominal segment of trunk | 1.77e-07 | 60 |
abdomen | 1.77e-07 | 60 |
subdivision of trunk | 9.13e-07 | 112 |